CX288003 | Citrus Genome Database

Overview


Name	CX288003
Unique Name	CX288003
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	720

Libraries


Library Name	Type
Veg1	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

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BLAST of CX288003 vs. ExPASy Swiss-Prot
Match: PP1R7_RAT (Protein phosphatase 1 regulatory subunit 7 OS=Rattus norvegicus GN=Ppp1r7 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.151e-18
Identity = 60/216 (27.78%), Postives = 111/216 (51.39%), Query Frame = 1

Query:   58 SIKSLTLTHKALSDVSCLTDFNNLERLDLSSNNLTSLEGLRHCVNLKWLSVVQNKLQSLKGIEGLSKLTVLNAGKNKLRSMDEVMSVVSLRALILNDNEIVSICKLDQMKELNSLVLSRNPIRKIGDSLLNMKAITKLSLSNCQVQIIGSSLKSCTELKELRLADNDIKTLPAKLAFNKKLQNLDLGKNLITRWSEXXXXXXXXXXNKPHLQGNPV 705
            S++ L L    +  +  L     LE LD+S N L ++EG+     LK L +V NK+  ++ I  L +L +L  G N++R+++ + ++ +L +L L  N+I  +  LD +  L  L +  N + KI + L N+  + +L LS+  +++I   L++  +L  L +A N IK +   ++   +LQ   +  NL+  WS+             +L+ NP+
Sbjct:  121 SLRELDLYDNQIKKIENLEALTELEVLDISFNLLRNIEGIDKLTQLKKLFLVNNKINKIENISTLQQLQMLELGSNRIRAIENIDTLTNLESLFLGKNKITKLQNLDALSNLTVLSMQSNRLTKI-EGLQNLVNLRELYLSHNGIEVI-EGLENNNKLTMLDIASNRIKKI-ENISHLTELQEFWMNDNLLESWSDLDELKGARSLETVYLERNPL 333

HSP 2 Score: 82.8037 bits (203), Expect = 2.031e-15
Identity = 57/192 (29.69%), Postives = 100/192 (52.08%), Query Frame = 1

Query:   61 IKSLTLTHKALSDVSCLTDFNNLERLDLSSNNLTSLEGLRHCVNLKWLSVVQNKLQSLKGIEGLSKLTVLNAGKNKLRSMDEVMSVVSLRALILNDNEIVSICKLDQMKELNSLVLSRNPIRKIGDSLLNMKAITKLSLSNCQVQIIGSSLKSCTELKELRLADNDIKTLPAKLAFNKKLQNLDLGKNLITR 636
            +KSL L    +  +  L +  +L  LDL  N +  +E L     L+ L +  N L++++GI+ L++L  L    NK+  ++ + ++  L+ L L  N I +I  +D +  L SL L +N I K+  +L  +  +T LS+ + ++  I   L++   L+EL L+ N I+ +   L  N KL  LD+  N I +
Sbjct:  100 VKSLCLRQNLIKCIENLDELQSLRELDLYDNQIKKIENLEALTELEVLDISFNLLRNIEGIDKLTQLKKLFLVNNKINKIENISTLQQLQMLELGSNRIRAIENIDTLTNLESLFLGKNKITKL-QNLDALSNLTVLSMQSNRLTKI-EGLQNLVNLRELYLSHNGIEVIEG-LENNNKLTMLDIASNRIKK 288

HSP 3 Score: 77.7962 bits (190), Expect = 6.534e-14
Identity = 43/146 (29.45%), Postives = 82/146 (56.16%), Query Frame = 1

Query:    1 MTRLSTEQILKDNKTGDPNSIKSLTLTHKALSDVSCLTDFNNLERLDLSSNNLTSLEGLRHCVNLKWLSVVQNKLQSLKGIEGLSKLTVLNAGKNKLRSMDEVMSVVSLRALILNDNEIVSICKLDQMK---ELNSLVLSRNPIRK 429
            M  L + +I          +++SL L    ++ +  L   +NL  L + SN LT +EGL++ VNL+ L +  N ++ ++G+E  +KLT+L+   N+++ ++ +  +  L+   +NDN + S   LD++K    L ++ L RNP++K
Sbjct:  190 MLELGSNRIRAIENIDTLTNLESLFLGKNKITKLQNLDALSNLTVLSMQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIASNRIKKIENISHLTELQEFWMNDNLLESWSDLDELKGARSLETVYLERNPLQK 335

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BLAST of CX288003 vs. ExPASy Swiss-Prot
Match: PP1R7_MOUSE (Protein phosphatase 1 regulatory subunit 7 OS=Mus musculus GN=Ppp1r7 PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.151e-18
Identity = 60/216 (27.78%), Postives = 111/216 (51.39%), Query Frame = 1

Query:   58 SIKSLTLTHKALSDVSCLTDFNNLERLDLSSNNLTSLEGLRHCVNLKWLSVVQNKLQSLKGIEGLSKLTVLNAGKNKLRSMDEVMSVVSLRALILNDNEIVSICKLDQMKELNSLVLSRNPIRKIGDSLLNMKAITKLSLSNCQVQIIGSSLKSCTELKELRLADNDIKTLPAKLAFNKKLQNLDLGKNLITRWSEXXXXXXXXXXNKPHLQGNPV 705
            S++ L L    +  +  L     LE LD+S N L ++EG+     LK L +V NK+  ++ I  L +L +L  G N++R+++ + ++ +L +L L  N+I  +  LD +  L  L +  N + KI + L ++  + +L LSN  +++I   L++  +L  L +A N IK +   ++   +LQ   +  NL+  WS+             +L+ NP+
Sbjct:  122 SLRELDLYDNQIKKIENLEALTELEVLDISFNMLRNIEGIDKLTQLKKLFLVNNKINKIENISNLHQLQMLELGSNRIRAIENIDTLTNLESLFLGKNKITKLQNLDALTNLTVLSVQSNRLAKI-EGLQSLVNLRELYLSNNGIEVI-EGLENNNKLTMLDIASNRIKKI-ENISHLTELQEFWMNDNLLESWSDLDELKGARSLETVYLERNPL 334

HSP 2 Score: 87.0409 bits (214), Expect = 1.077e-16
Identity = 59/194 (30.41%), Postives = 100/194 (51.55%), Query Frame = 1

Query:   61 IKSLTLTHKALSDVSCLTDFNNLERLDLSSNNLTSLEGLRHCVNLKWLSVVQNKLQSLKGIEGLSKLTVLNAGKNKLRSMDEVMSVVSLRALILNDNEIVSICKLDQMKELNSLVLSRNPIRKIGDSLLNMKAITKLSLSNCQVQIIG--SSLKSCTELKELRLADNDIKTLPAKLAFNKKLQNLDLGKNLITR 636
            +KSL L    +  +  L +  +L  LDL  N +  +E L     L+ L +  N L++++GI+ L++L  L    NK+  ++ + ++  L+ L L  N I +I  +D +  L SL L +N I K    L N+ A+T L++ + Q   +     L+S   L+EL L++N I+ +   L  N KL  LD+  N I +
Sbjct:  101 VKSLCLRQNLIKCIENLEELQSLRELDLYDNQIKKIENLEALTELEVLDISFNMLRNIEGIDKLTQLKKLFLVNNKINKIENISNLHQLQMLELGSNRIRAIENIDTLTNLESLFLGKNKITK----LQNLDALTNLTVLSVQSNRLAKIEGLQSLVNLRELYLSNNGIEVIEG-LENNNKLTMLDIASNRIKK 289

HSP 3 Score: 74.3294 bits (181), Expect = 7.225e-13
Identity = 42/146 (28.77%), Postives = 79/146 (54.11%), Query Frame = 1

Query:    1 MTRLSTEQILKDNKTGDPNSIKSLTLTHKALSDVSCLTDFNNLERLDLSSNNLTSLEGLRHCVNLKWLSVVQNKLQSLKGIEGLSKLTVLNAGKNKLRSMDEVMSVVSLRALILNDNEIVSICKLDQMK---ELNSLVLSRNPIRK 429
            M  L + +I          +++SL L    ++ +  L    NL  L + SN L  +EGL+  VNL+ L +  N ++ ++G+E  +KLT+L+   N+++ ++ +  +  L+   +NDN + S   LD++K    L ++ L RNP++K
Sbjct:  191 MLELGSNRIRAIENIDTLTNLESLFLGKNKITKLQNLDALTNLTVLSVQSNRLAKIEGLQSLVNLRELYLSNNGIEVIEGLENNNKLTMLDIASNRIKKIENISHLTELQEFWMNDNLLESWSDLDELKGARSLETVYLERNPLQK 336

[Close]

BLAST of CX288003 vs. ExPASy Swiss-Prot
Match: PP1R7_HUMAN (Protein phosphatase 1 regulatory subunit 7 OS=Homo sapiens GN=PPP1R7 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.564e-18
Identity = 59/216 (27.31%), Postives = 111/216 (51.39%), Query Frame = 1

Query:   58 SIKSLTLTHKALSDVSCLTDFNNLERLDLSSNNLTSLEGLRHCVNLKWLSVVQNKLQSLKGIEGLSKLTVLNAGKNKLRSMDEVMSVVSLRALILNDNEIVSICKLDQMKELNSLVLSRNPIRKIGDSLLNMKAITKLSLSNCQVQIIGSSLKSCTELKELRLADNDIKTLPAKLAFNKKLQNLDLGKNLITRWSEXXXXXXXXXXNKPHLQGNPV 705
            S++ L L    +  +  L     LE LD+S N L ++EG+     LK L +V NK+  ++ +  L +L +L  G N++R+++ + ++ +L +L L  N+I  +  LD +  L  L +  N + KI + L N+  + +L LS+  +++I   L++  +L  L +A N IK +   ++   +LQ   +  NL+  WS+             +L+ NP+
Sbjct:  121 SLRELDLYDNQIKKIENLEALTELEILDISFNLLRNIEGVDKLTRLKKLFLVNNKISKIENLSNLHQLQMLELGSNRIRAIENIDTLTNLESLFLGKNKITKLQNLDALTNLTVLSMQSNRLTKI-EGLQNLVNLRELYLSHNGIEVI-EGLENNNKLTMLDIASNRIKKI-ENISHLTELQEFWMNDNLLESWSDLDELKGARSLETVYLERNPL 333

HSP 2 Score: 77.411 bits (189), Expect = 8.534e-14
Identity = 43/146 (29.45%), Postives = 81/146 (55.48%), Query Frame = 1

Query:    1 MTRLSTEQILKDNKTGDPNSIKSLTLTHKALSDVSCLTDFNNLERLDLSSNNLTSLEGLRHCVNLKWLSVVQNKLQSLKGIEGLSKLTVLNAGKNKLRSMDEVMSVVSLRALILNDNEIVSICKLDQMK---ELNSLVLSRNPIRK 429
            M  L + +I          +++SL L    ++ +  L    NL  L + SN LT +EGL++ VNL+ L +  N ++ ++G+E  +KLT+L+   N+++ ++ +  +  L+   +NDN + S   LD++K    L ++ L RNP++K
Sbjct:  190 MLELGSNRIRAIENIDTLTNLESLFLGKNKITKLQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIASNRIKKIENISHLTELQEFWMNDNLLESWSDLDELKGARSLETVYLERNPLQK 335

[Close]

BLAST of CX288003 vs. ExPASy Swiss-Prot
Match: PP1R7_PONAB (Protein phosphatase 1 regulatory subunit 7 OS=Pongo abelii GN=PPP1R7 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.662e-17
Identity = 58/216 (26.85%), Postives = 110/216 (50.93%), Query Frame = 1

Query:   58 SIKSLTLTHKALSDVSCLTDFNNLERLDLSSNNLTSLEGLRHCVNLKWLSVVQNKLQSLKGIEGLSKLTVLNAGKNKLRSMDEVMSVVSLRALILNDNEIVSICKLDQMKELNSLVLSRNPIRKIGDSLLNMKAITKLSLSNCQVQIIGSSLKSCTELKELRLADNDIKTLPAKLAFNKKLQNLDLGKNLITRWSEXXXXXXXXXXNKPHLQGNPV 705
            S++ L L    +  +  L     LE LD+S N L ++EG+     LK L +V NK+  ++ +  L +L +L  G N++R+++ + ++ +L +L L  N+I  +  LD +  L  L +  N + KI + L N+  + +L LS+  +++I   L++  +L  L +A N IK +   ++   + Q   +  NL+  WS+             +L+ NP+
Sbjct:  121 SLRELDLYDNQIKKIENLEALTELEILDISFNLLRNIEGVDKVTQLKKLFLVNNKISKIENLSNLHQLQMLELGSNRIRAIENIDTLTNLESLFLGKNKITKLQNLDALTNLTVLSMQSNRLTKI-EGLQNLVNLQELYLSHNGIEVI-EGLENNNKLTMLDIASNRIKKI-ENISHLTEPQEFWMNDNLLESWSDLDELKGARSLETVYLERNPL 333

HSP 2 Score: 74.3294 bits (181), Expect = 7.225e-13
Identity = 42/146 (28.77%), Postives = 80/146 (54.79%), Query Frame = 1

Query:    1 MTRLSTEQILKDNKTGDPNSIKSLTLTHKALSDVSCLTDFNNLERLDLSSNNLTSLEGLRHCVNLKWLSVVQNKLQSLKGIEGLSKLTVLNAGKNKLRSMDEVMSVVSLRALILNDNEIVSICKLDQMK---ELNSLVLSRNPIRK 429
            M  L + +I          +++SL L    ++ +  L    NL  L + SN LT +EGL++ VNL+ L +  N ++ ++G+E  +KLT+L+   N+++ ++ +  +   +   +NDN + S   LD++K    L ++ L RNP++K
Sbjct:  190 MLELGSNRIRAIENIDTLTNLESLFLGKNKITKLQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLQELYLSHNGIEVIEGLENNNKLTMLDIASNRIKKIENISHLTEPQEFWMNDNLLESWSDLDELKGARSLETVYLERNPLQK 335

[Close]

BLAST of CX288003 vs. ExPASy Swiss-Prot
Match: PP1R7_BOVIN (Protein phosphatase 1 regulatory subunit 7 OS=Bos taurus GN=PPP1R7 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.834e-17
Identity = 59/216 (27.31%), Postives = 110/216 (50.93%), Query Frame = 1

Query:   58 SIKSLTLTHKALSDVSCLTDFNNLERLDLSSNNLTSLEGLRHCVNLKWLSVVQNKLQSLKGIEGLSKLTVLNAGKNKLRSMDEVMSVVSLRALILNDNEIVSICKLDQMKELNSLVLSRNPIRKIGDSLLNMKAITKLSLSNCQVQIIGSSLKSCTELKELRLADNDIKTLPAKLAFNKKLQNLDLGKNLITRWSEXXXXXXXXXXNKPHLQGNPV 705
            S++ L L    +  +  L     LE LD+S N L ++EG+     LK L +V NK+  ++ I  L +L +L  G N++R+++ + ++ +L +L L  N+I  +  LD +  L  L +  N + KI + L ++  + +L LS+  +++I   L +  +L  L +A N IK +   ++   +LQ   +  NL+  WS+             +L+ NP+
Sbjct:  121 SLRELDLYDNQIRRIENLDALTELEVLDISFNLLRNIEGIDKLTRLKKLFLVNNKINKIENISSLHQLQMLELGSNRIRAIENIDTLTNLESLFLGKNKITKLQNLDALTNLTVLSMQSNRLTKI-EGLQSLVNLRELYLSHNGIEVI-EGLDNNNKLTMLDIASNRIKKI-ENVSHLTELQEFWMNDNLLDCWSDLDELKGARSLETVYLERNPL 333

HSP 2 Score: 82.8037 bits (203), Expect = 2.031e-15
Identity = 59/194 (30.41%), Postives = 98/194 (50.52%), Query Frame = 1

Query:   61 IKSLTLTHKALSDVSCLTDFNNLERLDLSSNNLTSLEGLRHCVNLKWLSVVQNKLQSLKGIEGLSKLTVLNAGKNKLRSMDEVMSVVSLRALILNDNEIVSICKLDQMKELNSLVLSRNPIRKIGDSLLNMKAITKLSLSNCQVQIIG--SSLKSCTELKELRLADNDIKTLPAKLAFNKKLQNLDLGKNLITR 636
            +K+L L    +  +  L    +L  LDL  N +  +E L     L+ L +  N L++++GI+ L++L  L    NK+  ++ + S+  L+ L L  N I +I  +D +  L SL L +N I K    L N+ A+T L++ + Q   +     L+S   L+EL L+ N I+ +   L  N KL  LD+  N I +
Sbjct:  100 VKTLCLRQNLIKCIENLEGLQSLRELDLYDNQIRRIENLDALTELEVLDISFNLLRNIEGIDKLTRLKKLFLVNNKINKIENISSLHQLQMLELGSNRIRAIENIDTLTNLESLFLGKNKITK----LQNLDALTNLTVLSMQSNRLTKIEGLQSLVNLRELYLSHNGIEVIEG-LDNNNKLTMLDIASNRIKK 288

HSP 3 Score: 72.4034 bits (176), Expect = 2.745e-12
Identity = 50/178 (28.09%), Postives = 94/178 (52.81%), Query Frame = 1

Query:   61 IKSLTLTHKALSDVSCLTDFNNLERLDLSSNNLTSLEGLRHCVNLKWLSVVQNKLQSLKGIEGLSKLTVLNAGKNKLRSMDEVMSVVSLRALILNDNEIVSICKLDQMKELNSLVLSRNPIRKIGDSLLNMKAITKL-------SLSNCQVQIIGSSLKSCTELKELRLADNDIKTLP 573
            +K L L +  ++ +  ++  + L+ L+L SN + ++E +    NL+ L + +NK+  L+ ++ L+ LTVL+   N+L  ++ + S+V+LR L L+ N I  I  LD   +L  L ++ N I+KI     N+  +T+L       +L +C   +    LK    L+ + L  N ++  P
Sbjct:  166 LKKLFLVNNKINKIENISSLHQLQMLELGSNRIRAIENIDTLTNLESLFLGKNKITKLQNLDALTNLTVLSMQSNRLTKIEGLQSLVNLRELYLSHNGIEVIEGLDNNNKLTMLDIASNRIKKIE----NVSHLTELQEFWMNDNLLDCWSDL--DELKGARSLETVYLERNPLQRDP 337

HSP 4 Score: 72.4034 bits (176), Expect = 2.745e-12
Identity = 41/146 (28.08%), Postives = 79/146 (54.11%), Query Frame = 1

Query:    1 MTRLSTEQILKDNKTGDPNSIKSLTLTHKALSDVSCLTDFNNLERLDLSSNNLTSLEGLRHCVNLKWLSVVQNKLQSLKGIEGLSKLTVLNAGKNKLRSMDEVMSVVSLRALILNDNEIVSICKLDQMK---ELNSLVLSRNPIRK 429
            M  L + +I          +++SL L    ++ +  L    NL  L + SN LT +EGL+  VNL+ L +  N ++ ++G++  +KLT+L+   N+++ ++ V  +  L+   +NDN +     LD++K    L ++ L RNP+++
Sbjct:  190 MLELGSNRIRAIENIDTLTNLESLFLGKNKITKLQNLDALTNLTVLSMQSNRLTKIEGLQSLVNLRELYLSHNGIEVIEGLDNNNKLTMLDIASNRIKKIENVSHLTELQEFWMNDNLLDCWSDLDELKGARSLETVYLERNPLQR 335

[Close]

BLAST of CX288003 vs. ExPASy Swiss-Prot
Match: INLA_LISMF (Internalin-A OS=Listeria monocytogenes serotype 4b (strain F2365) GN=inlA PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.314e-17
Identity = 61/205 (29.76%), Postives = 110/205 (53.66%), Query Frame = 1

Query:   10 LSTEQILKDNKTGDPNSIKSLTLTHKALSDVSCLTDFNNLERLDLSSNNLTSLEGLRHCVNLKWLSVVQNKLQSLKGIEGLSKLTVLNAGKNKLRSMDEVMSVVSLRALILNDNEIVSICKLDQMKELNSLVLSRNPIRKIGDSLLNMKAITKLSLSNCQVQIIGSSLKSCTELKELRLADNDIKTLPAKLAFNKKLQNLDLGKN 624
            ++  QI       + +++  LTL +  ++D+  L +  NL RL+LSSN ++ +  L    +L+ LS   N++  LK +  L+ L  L+   NK+  +  +  + +L +LI  +N+I  I  L  +  L+ L L+ N ++ IG +L ++  +T L L+N Q+  + + L   T+L EL+L  N I  + + LA    L NL+L +N
Sbjct:  127 MNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG-TLASLTNLTDLDLANNQISNL-APLSGLTKLTELKLGANQISNI-SPLAGLTALTNLELNEN 327

HSP 2 Score: 75.485 bits (184), Expect = 3.243e-13
Identity = 50/171 (29.24%), Postives = 87/171 (50.88%), Query Frame = 1

Query:   58 SIKSLTLTHKALSDVSCLTDFNNLERLDLSSNNLTSLEGLRHCVNLKWLSVVQNKLQSLKGIEGLSKLTVLNAGKNKLRSMDEVMSVVSLRALILNDNEIVSICKLDQMKELNSLVLSRNPIRKIGDSLLNMKAITKLSLSNCQVQIIGSSLKSCTELKELRLADNDIKTL 570
            +++SL  T+  +SD++ L    NL+ L L+ N L  +  L    NL  L +  N++ +L  + GL+KLT L  G N++ ++  +  + +L  L LN+N++  I  +  +K L  L L  N I  I   + ++  + +L   N +V  + SSL + T +  L    N I  L
Sbjct:  230 NLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDI-SPVSSLTKLQRLFFYNNKVSDV-SSLANLTNINWLSAGHNQISDL 398

HSP 3 Score: 69.3218 bits (168), Expect = 2.324e-11
Identity = 56/207 (27.05%), Postives = 101/207 (48.79%), Query Frame = 1

Query:   28 LKDNKTGDPNSIKSLTLTHKA-----LSDVSCLTDFNNLERLDLSSNNLTSLEGLRHCVNLKWLSVVQNKLQSLKGIEGLSKLTVLNAGKNKLRSMDEVMSVVSLRALILNDNEIVSICKLDQMKELNSLVLSRNPIRKIGDSLLNMKAITKLSLSNCQVQIIGSSLKSCTELKELRLADNDIKTLPAKLAFNKKLQNLDLGKNLIT 633
            L  N   D +++  LT   +      ++D+  L +   LERLD+SSN ++ +  L    NL+ L    N++  +  +  L+ L  L+   N+L+ +  + S+ +L  L L +N+I ++  L  + +L  L L  N I  I   L  + A+T L L+  Q++ I S + +   L  L L  N+I  + + ++   KLQ L    N ++
Sbjct:  171 LSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNI-SPLAGLTALTNLELNENQLEDI-SPISNLKNLTYLTLYFNNISDI-SPVSSLTKLQRLFFYNNKVS 374

[Close]

BLAST of CX288003 vs. ExPASy Swiss-Prot
Match: INLA_LISMO (Internalin-A OS=Listeria monocytogenes GN=inlA PE=1 SV=3)

HSP 1 Score: 87.4261 bits (215), Expect = 8.247e-17
Identity = 61/205 (29.76%), Postives = 109/205 (53.17%), Query Frame = 1

Query:   10 LSTEQILKDNKTGDPNSIKSLTLTHKALSDVSCLTDFNNLERLDLSSNNLTSLEGLRHCVNLKWLSVVQNKLQSLKGIEGLSKLTVLNAGKNKLRSMDEVMSVVSLRALILNDNEIVSICKLDQMKELNSLVLSRNPIRKIGDSLLNMKAITKLSLSNCQVQIIGSSLKSCTELKELRLADNDIKTLPAKLAFNKKLQNLDLGKN 624
            ++  QI       +  ++  LTL +  ++D+  L +  NL RL+LSSN ++ +  L    +L+ LS   N++  LK +  L+ L  L+   NK+  +  +  + +L +LI  +N+I  I  L  +  L+ L L+ N ++ IG +L ++  +T L L+N Q+  + + L   T+L EL+L  N I  + + LA    L NL+L +N
Sbjct:  127 MNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG-TLASLTNLTDLDLANNQISNL-APLSGLTKLTELKLGANQISNI-SPLAGLTALTNLELNEN 327

HSP 2 Score: 75.485 bits (184), Expect = 3.243e-13
Identity = 50/171 (29.24%), Postives = 87/171 (50.88%), Query Frame = 1

Query:   58 SIKSLTLTHKALSDVSCLTDFNNLERLDLSSNNLTSLEGLRHCVNLKWLSVVQNKLQSLKGIEGLSKLTVLNAGKNKLRSMDEVMSVVSLRALILNDNEIVSICKLDQMKELNSLVLSRNPIRKIGDSLLNMKAITKLSLSNCQVQIIGSSLKSCTELKELRLADNDIKTL 570
            +++SL  T+  +SD++ L    NL+ L L+ N L  +  L    NL  L +  N++ +L  + GL+KLT L  G N++ ++  +  + +L  L LN+N++  I  +  +K L  L L  N I  I   + ++  + +L   N +V  + SSL + T +  L    N I  L
Sbjct:  230 NLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDI-SPVSSLTKLQRLFFYNNKVSDV-SSLANLTNINWLSAGHNQISDL 398

HSP 3 Score: 69.3218 bits (168), Expect = 2.324e-11
Identity = 56/207 (27.05%), Postives = 101/207 (48.79%), Query Frame = 1

Query:   28 LKDNKTGDPNSIKSLTLTHKA-----LSDVSCLTDFNNLERLDLSSNNLTSLEGLRHCVNLKWLSVVQNKLQSLKGIEGLSKLTVLNAGKNKLRSMDEVMSVVSLRALILNDNEIVSICKLDQMKELNSLVLSRNPIRKIGDSLLNMKAITKLSLSNCQVQIIGSSLKSCTELKELRLADNDIKTLPAKLAFNKKLQNLDLGKNLIT 633
            L  N   D +++  LT   +      ++D+  L +   LERLD+SSN ++ +  L    NL+ L    N++  +  +  L+ L  L+   N+L+ +  + S+ +L  L L +N+I ++  L  + +L  L L  N I  I   L  + A+T L L+  Q++ I S + +   L  L L  N+I  + + ++   KLQ L    N ++
Sbjct:  171 LSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNI-SPLAGLTALTNLELNENQLEDI-SPISNLKNLTYLTLYFNNISDI-SPVSSLTKLQRLFFYNNKVS 374

[Close]

BLAST of CX288003 vs. ExPASy Swiss-Prot
Match: PP1R7_XENTR (Protein phosphatase 1 regulatory subunit 7 OS=Xenopus tropicalis GN=ppp1r7 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.399e-16
Identity = 61/216 (28.24%), Postives = 108/216 (50.00%), Query Frame = 1

Query:   58 SIKSLTLTHKALSDVSCLTDFNNLERLDLSSNNLTSLEGLRHCVNLKWLSVVQNKLQSLKGIEGLSKLTVLNAGKNKLRSMDEVMSVVSLRALILNDNEIVSICKLDQMKELNSLVLSRNPIRKIGDSLLNMKAITKLSLSNCQVQIIGSSLKSCTELKELRLADNDIKTLPAKLAFNKKLQNLDLGKNLITRWSEXXXXXXXXXXNKPHLQGNPV 705
            ++  L L    +  +  L    +L+ LDLS N L  +EGL    +L+ L +V NK+  ++    L++L +L  G N+LR ++ + S+  L +L L  N+I  +  L+ +  L  L +  N + KI + L N+  + +L LS+  +Q+I   L++  +L  L LA N IK +   +    +LQ   +  NL+  WS+             +L+ NP+
Sbjct:  107 TLTELDLYDNQIRKIGNLETLRDLQILDLSFNLLRRIEGLESLSHLQRLYLVNNKISRIENFGTLTQLRLLELGSNRLRVIENLDSLRELDSLFLGKNKITKLQNLETLTNLTVLSVQSNRLTKI-EGLQNLVNLRELYLSDNGIQVI-EGLENNNKLTTLDLASNRIKRI-ENIKHLSELQEFWMNDNLVENWSDLEELSGAPGLQTVYLERNPL 319

HSP 2 Score: 83.1889 bits (204), Expect = 1.555e-15
Identity = 61/194 (31.44%), Postives = 97/194 (50.00%), Query Frame = 1

Query:   61 IKSLTLTHKALSDVSCLTDFNNLERLDLSSNNLTSLEGLRHCVNLKWLSVVQNKLQSLKGIEGLSKLTVLNAGKNKLRSMDEVMSVVSLRALILNDNEIVSICKLDQMKELNSLVLSRNPIRKIGDSLLNMKAITKLSLSNCQVQIIG--SSLKSCTELKELRLADNDIKTLPAKLAFNKKLQNLDLGKNLITR 636
            +K+L L    +  +  L     L  LDL  N +  +  L    +L+ L +  N L+ ++G+E LS L  L    NK+  ++   ++  LR L L  N +  I  LD ++EL+SL L +N I K    L N++ +T L++ + Q   +     L++   L+EL L+DN I+ +   L  N KL  LDL  N I R
Sbjct:   86 VKTLCLRQNLIKLIENLEQLVTLTELDLYDNQIRKIGNLETLRDLQILDLSFNLLRRIEGLESLSHLQRLYLVNNKISRIENFGTLTQLRLLELGSNRLRVIENLDSLRELDSLFLGKNKITK----LQNLETLTNLTVLSVQSNRLTKIEGLQNLVNLRELYLSDNGIQVIEG-LENNNKLTTLDLASNRIKR 274

HSP 3 Score: 70.0922 bits (170), Expect = 1.363e-11
Identity = 38/126 (30.16%), Postives = 72/126 (57.14%), Query Frame = 1

Query:   61 IKSLTLTHKALSDVSCLTDFNNLERLDLSSNNLTSLEGLRHCVNLKWLSVVQNKLQSLKGIEGLSKLTVLNAGKNKLRSMDEVMSVVSLRALILNDNEIVSICKLDQMK---ELNSLVLSRNPIRK 429
            + SL L    ++ +  L    NL  L + SN LT +EGL++ VNL+ L +  N +Q ++G+E  +KLT L+   N+++ ++ +  +  L+   +NDN + +   L+++     L ++ L RNP++K
Sbjct:  196 LDSLFLGKNKITKLQNLETLTNLTVLSVQSNRLTKIEGLQNLVNLRELYLSDNGIQVIEGLENNNKLTTLDLASNRIKRIENIKHLSELQEFWMNDNLVENWSDLEELSGAPGLQTVYLERNPLQK 321

HSP 4 Score: 69.707 bits (169), Expect = 1.780e-11
Identity = 52/186 (27.96%), Postives = 96/186 (51.61%), Query Frame = 1

Query:   16 TEQILKDN---KTGDPNSIKSLT---LTHKALSDVSCLTDFNNLERLDLSSNNLTSLEGLRHCVNLKWLSVVQNKLQSLKGIEGLSKLTVLNAGKNKLRSMDEVMSVVSLRALILNDNEIVSICKLDQMKELNSLVLSRNPIRKIGDSLLNMKAITKLSLSNCQVQIIGSSLKSCTELKELRLADN 555
            TE  L DN   K G+  +++ L    L+   L  +  L   ++L+RL L +N ++ +E       L+ L +  N+L+ ++ ++ L +L  L  GKNK+  +  + ++ +L  L +  N +  I  L  +  L  L LS N I+ I + L N   +T L L++ +++ I  ++K  +EL+E  + DN
Sbjct:  109 TELDLYDNQIRKIGNLETLRDLQILDLSFNLLRRIEGLESLSHLQRLYLVNNKISRIENFGTLTQLRLLELGSNRLRVIENLDSLRELDSLFLGKNKITKLQNLETLTNLTVLSVQSNRLTKIEGLQNLVNLRELYLSDNGIQVI-EGLENNNKLTTLDLASNRIKRI-ENIKHLSELQEFWMNDN 292

[Close]

BLAST of CX288003 vs. ExPASy Swiss-Prot
Match: PP1R7_DANRE (Protein phosphatase 1 regulatory subunit 7 OS=Danio rerio GN=ppp1r7 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.346e-16
Identity = 58/216 (26.85%), Postives = 109/216 (50.46%), Query Frame = 1

Query:   58 SIKSLTLTHKALSDVSCLTDFNNLERLDLSSNNLTSLEGLRHCVNLKWLSVVQNKLQSLKGIEGLSKLTVLNAGKNKLRSMDEVMSVVSLRALILNDNEIVSICKLDQMKELNSLVLSRNPIRKIGDSLLNMKAITKLSLSNCQVQIIGSSLKSCTELKELRLADNDIKTLPAKLAFNKKLQNLDLGKNLITRWSEXXXXXXXXXXNKPHLQGNPV 705
            S++ L L    +  +  L     LE+LD+S N L  +EGL     +K L ++ NK+ S+  ++ L+ L +L  G N++R ++ + S+ SL +L L  N+I  +  LD +  L  L +  N I K+ + L N+  + +L LS+  ++++   L++  +L  L +A N IK +   ++    L+   +  N I  W++             +L+ NP+
Sbjct:  106 SLRELDLYDNQIRKLENLQALTELEQLDVSFNLLRKIEGLDSLTKVKKLFLLHNKIASIANLDHLTSLQMLELGSNRIRVIENLDSLSSLESLFLGTNKITQLQNLDGLHNLTVLSIQSNRITKL-EGLQNLVNLRELYLSHNGIEVM-EGLENNKKLSTLDIAANRIKKI-ENISHLTDLKEFWMNDNQIENWADLDELKNAKGLETVYLERNPL 318

HSP 2 Score: 79.337 bits (194), Expect = 2.246e-14
Identity = 43/146 (29.45%), Postives = 82/146 (56.16%), Query Frame = 1

Query:    1 MTRLSTEQILKDNKTGDPNSIKSLTLTHKALSDVSCLTDFNNLERLDLSSNNLTSLEGLRHCVNLKWLSVVQNKLQSLKGIEGLSKLTVLNAGKNKLRSMDEVMSVVSLRALILNDNEIVSICKLDQMKE---LNSLVLSRNPIRK 429
            M  L + +I         +S++SL L    ++ +  L   +NL  L + SN +T LEGL++ VNL+ L +  N ++ ++G+E   KL+ L+   N+++ ++ +  +  L+   +NDN+I +   LD++K    L ++ L RNP++K
Sbjct:  175 MLELGSNRIRVIENLDSLSSLESLFLGTNKITQLQNLDGLHNLTVLSIQSNRITKLEGLQNLVNLRELYLSHNGIEVMEGLENNKKLSTLDIAANRIKKIENISHLTDLKEFWMNDNQIENWADLDELKNAKGLETVYLERNPLQK 320

HSP 3 Score: 72.7886 bits (177), Expect = 2.102e-12
Identity = 46/173 (26.59%), Postives = 98/173 (56.65%), Query Frame = 1

Query:   61 IKSLTLTHKALSDVSCLTDFNNLERLDLSSNNLTSLEGLRHCVNLKWLSVVQNKLQSLKGIEGLSKLTVLNAGKNKLRSMDEVMSVVSLRALILNDNEIVSICKLDQMKELNSLVLSRNPIRKIGDSLLNMKAITKLSLSNCQVQIIG--SSLKSCTELKELRLADNDIKTLP 573
            +K L L H  ++ ++ L    +L+ L+L SN +  +E L    +L+ L +  NK+  L+ ++GL  LTVL+   N++  ++ + ++V+LR L L+ N I  +  L+  K+L++L ++ N I+KI +++ ++  + +  +++ Q++       LK+   L+ + L  N ++  P
Sbjct:  151 VKKLFLLHNKIASIANLDHLTSLQMLELGSNRIRVIENLDSLSSLESLFLGTNKITQLQNLDGLHNLTVLSIQSNRITKLEGLQNLVNLRELYLSHNGIEVMEGLENNKKLSTLDIAANRIKKI-ENISHLTDLKEFWMNDNQIENWADLDELKNAKGLETVYLERNPLQKDP 322

[Close]

BLAST of CX288003 vs. ExPASy Swiss-Prot
Match: YNZ9_CAEEL (Uncharacterized protein T09A5.9 OS=Caenorhabditis elegans GN=T09A5.9 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.720e-14
Identity = 58/215 (26.98%), Postives = 113/215 (52.56%), Query Frame = 1

Query:   58 SIKSLTLTHKALSDVSCLTDFNNLERLDLSSNNLTSLEGLRHCVNLKWLSVVQNKLQSLKGIEGLSKLTVLNAGKNKLRSMDEVMSVVSLRALILNDNEIVSICKLDQMKELNSLVLSRNPIRKIGDSLLNMKAITKLSLSNCQVQIIGSSLKSCTELKELRLADNDIKTLPAKLAFNKKLQNLDLGKNLITRWSEXXXXXXXXXXNKPHLQGNP 702
            ++ SL L    L+++S L    NL  LDLS N +  + GL     L+ L +V NK++ ++ +E L++L +L  G N+++ ++ +  +V+L  L +  N+I  +  ++ +++L+ L L  N I KI +++  +  + +L LS+  +Q I   ++  T L  L +A+N+IKT  + +   + L +     N +  +SE             +L+ NP
Sbjct:   82 TLTSLDLYENQLTEISHLESLVNLVSLDLSYNRIRQINGLDKLTKLETLYLVSNKIEKIENLEALTQLKLLELGDNRIKKIENIGHLVNLDELFIGKNKIRQLEGVETLQKLSVLSLPGNRIVKI-ENVEQLNNLKELYLSDQGLQDI-HGVEPLTNLLLLDVANNEIKTF-SGVERLESLNDFWANDNKVESFSEIEQLSKLKGLQTVYLERNP 293

The following BLAST results are available for this feature:

BLAST of CX288003 vs. ExPASy Swiss-Prot

BLAST of CX288003 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38


Match Name	E-value	Identity	Description
PP1R7_RAT	1.151e-18	27.78	Protein phosphatase 1 regulatory subunit 7 OS=Ratt...	[more]
PP1R7_MOUSE	1.151e-18	27.78	Protein phosphatase 1 regulatory subunit 7 OS=Mus ...	[more]
PP1R7_HUMAN	2.564e-18	27.31	Protein phosphatase 1 regulatory subunit 7 OS=Homo...	[more]
PP1R7_PONAB	1.662e-17	26.85	Protein phosphatase 1 regulatory subunit 7 OS=Pong...	[more]
PP1R7_BOVIN	2.834e-17	27.31	Protein phosphatase 1 regulatory subunit 7 OS=Bos ...	[more]
INLA_LISMF	6.314e-17	29.76	Internalin-A OS=Listeria monocytogenes serotype 4b...	[more]
INLA_LISMO	8.247e-17	29.76	Internalin-A OS=Listeria monocytogenes GN=inlA PE=...	[more]
PP1R7_XENTR	2.399e-16	28.24	Protein phosphatase 1 regulatory subunit 7 OS=Xeno...	[more]
PP1R7_DANRE	5.346e-16	26.85	Protein phosphatase 1 regulatory subunit 7 OS=Dani...	[more]
YNZ9_CAEEL	1.720e-14	26.98	Uncharacterized protein T09A5.9 OS=Caenorhabditis ...	[more]

Pages

Properties


Property Name	Value
Genbank description	C01015G04SK Veg1 Citrus clementina cDNA clone C01015G04, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CX288003 ID=CX288003; Name=CX288003; organism=Citrus clementina; type=EST; length=720bp
ATGACACGACTGAGCACCGAGCAAATTTTGAAGGACAACAAGACTGGCGA
TCCCAATTCCATAAAATCTCTGACTCTCACTCACAAAGCTCTCTCCGACG
TCTCTTGCTTGACCGATTTCAACAACTTGGAGAGACTCGACCTTAGCTCC
AACAACCTCACTTCTCTTGAGGGGTTGAGGCATTGCGTGAATTTGAAGTG
GCTATCAGTTGTGCAAAACAAATTGCAAAGCTTAAAAGGAATCGAAGGAC
TCTCTAAGCTCACTGTGTTGAATGCGGGCAAAAATAAGCTTAGATCGATG
GATGAGGTGATGTCTGTCGTGAGCTTACGTGCTTTAATTCTGAATGACAA
TGAGATTGTTTCGATATGCAAACTTGATCAGATGAAGGAATTGAACTCTC
TTGTTCTTTCTCGAAATCCAATTCGCAAAATTGGCGATTCTCTGCTCAAT
ATGAAAGCTATTACAAAGCTCTCTCTCTCAAACTGCCAAGTCCAGATTAT
TGGTTCTTCGCTCAAGTCTTGCACAGAATTGAAAGAACTCCGACTTGCTG
ACAATGACATTAAGACTCTTCCGGCCAAGTTGGCTTTTAATAAGAAGCTT
CAAAATTTAGACTTAGGAAAGAACTTGATCACAAGATGGTCAGAATTGAA
GGTGCTGAAGTCATTAGTCAGTCTGAATAAACCTCATCTACAAGGAAACC
CTGTAGCTGAATATGATAAA