CX288006

Overview
NameCX288006
Unique NameCX288006
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length575
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX288006 vs. ExPASy Swiss-Prot
Match: CDC25_ARATH (Dual specificity phosphatase Cdc25 OS=Arabidopsis thaliana GN=CDC25 PE=1 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 2.202e-55
Identity = 100/131 (76.34%), Postives = 114/131 (87.02%), Query Frame = 2 
Query:    8 EEEKAMARSISYISGSQLLSLKRRPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKISDLIQEVRGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTDVPCK 400
            +++ AMARSISYI+ +QLL L RRPNIA+IDVRD+ER+YDGHI GSLHY S SF DKIS L+Q V+ KDTLVFHCALSQVRGPTCA+RL NYLDE KEDTGI +I +LERGF GWEASGKPVCRC +VPCK
Sbjct:   12 KKKMAMARSISYITSTQLLPLHRRPNIAIIDVRDEERNYDGHIAGSLHYASGSFDDKISHLVQNVKDKDTLVFHCALSQVRGPTCARRLVNYLDEKKEDTGIKNIMILERGFNGWEASGKPVCRCAEVPCK 142
The following BLAST results are available for this feature:
BLAST of CX288006 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
CDC25_ARATH2.202e-5576.34Dual specificity phosphatase Cdc25 OS=Arabidopsis ... [more]
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Properties
Property NameValue
Genbank descriptionC01015G07SK Veg1 Citrus clementina cDNA clone C01015G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288006 ID=CX288006; Name=CX288006; organism=Citrus clementina; type=EST; length=575bp
GGAAAGTGAAGAAGAGAAAGCAATGGCTCGGTCCATCTCCTACATATCGG
GCTCGCAGCTTCTCTCTCTGAAACGCCGTCCAAATATTGCCGTTATAGAT
GTCAGGGACGATGAAAGGAGTTACGATGGGCATATAACAGGATCTCTGCA
CTACCCCAGTGACAGCTTCACTGATAAGATCTCTGATCTTATTCAAGAGG
TCAGGGGCAAAGATACCCTTGTTTTTCACTGCGCTTTAAGCCAGGTTCGT
GGCCCAACTTGCGCCAAGAGGCTTGCTAATTATCTCGACGAGGTGAAAGA
AGATACCGGGATAAATAGCATTTTTGTCCTGGAACGTGGCTTCAAGGGCT
GGGAAGCTTCTGGGAAACCTGTTTGTCGCTGCACTGATGTTCCATGTAAG
GAGGAGAATCAACAATATTGATTTGATGCAAATCACAGTTGAGAATCACA
TATAATTATGTCCCAATAGTGTTATAGCACTGTTTGTTTAGTGAATTCAT
TCCTGACATTACATGATGCTACTTAAACAATATAATATGTAATGCTAGTT
TTTGATTTAAAAAAAAAAAAAAAAA
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