CX288009

Overview
NameCX288009
Unique NameCX288009
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length661
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288009 vs. ExPASy Swiss-Prot
Match: PNPP_SCHPO (4-nitrophenylphosphatase OS=Schizosaccharomyces pombe GN=pho2 PE=2 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 3.805e-31
Identity = 76/206 (36.89%), Postives = 118/206 (57.28%), Query Frame = 3
Query:   42 ELLSANNITALFDSVDAFLFDCDGVIWKGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVSEDEMFSSSFAAAMYL-KVNNFPQENKVYVIGGEGILEELRQAGYTGLGGPEDGEKRVQLKSNC-LFEHDKNVGAVVVGLDPHINYYK----LQYGTLCIRENPGCLFIATNRDAVGHLTDLQEWPGAGCM 641
            +L S        D  D FLFDCDGV+W G K I GV  T+ +LRS GK++IFV+NNS +SR  Y +K +  G++   +E++ S++++A Y+ KV   P + KV+V+G  GI +EL + G   +GG +   +R     +      D +VGAV+ G+D H+ Y K     QY      ++P C F+ TN+D+    T+ +  PG+G +
Sbjct:    4 KLSSPKEYKEFIDKFDVFLFDCDGVLWSGSKPIPGVTDTMKLLRSLGKQIIFVSNNSTKSRETYMNKINEHGIAAKLEEIYPSAYSSATYVKKVLKLPADKKVFVLGEAGIEDELDRVGVAHIGGTDPSLRRALASEDVEKIGPDPSVGAVLCGMDMHVTYLKYCMAFQY-----LQDPNCAFLLTNQDST-FPTNGKFLPGSGAI 203          
BLAST of CX288009 vs. ExPASy Swiss-Prot
Match: PNPP_YEAST (4-nitrophenylphosphatase OS=Saccharomyces cerevisiae GN=PHO13 PE=1 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 4.970e-31
Identity = 82/223 (36.77%), Postives = 123/223 (55.16%), Query Frame = 3
Query:   12 MSGQNGQAPAELLSANNITALFDSVDAFLFDCDGVIWKGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVSEDEMFSSSFAAAMYLK--VNNFPQENKVYVIGGEGILEELRQAGYTGLGG-------PEDGEKRVQLKSNCLFEHDKNVGAVVVGLDPHINYYKLQYGTLCIRENPGCLFIATNRDAVGHLTDLQEWPGAGCMVAAM 653
            M+ Q G  P ++ +        D  D FLFDCDGV+W G + +    + L++L+  GK+LIFVTNNS +SR  Y  KF S G+ V E+++F+S +A+A+Y++  +   P ++KV+V G  GI EEL+  GY  LGG       P D  K   L +      DK+V  V+ GLD  +NY++L   TL   +     F+ TN D+         +PGAG M+ ++
Sbjct:    1 MTAQQG-VPIKITNKEIAQEFLDKYDTFLFDCDGVLWLGSQALPYTLEILNLLKQLGKQLIFVTNNSTKSRLAYTKKFASFGIDVKEEQIFTSGYASAVYIRDFLKLQPGKDKVWVFGESGIGEELKLMGYESLGGADSRLDTPFDAAKSPFLVNGL----DKDVSCVIAGLDTKVNYHRLAV-TLQYLQKDSVHFVGTNVDSTFPQKG-YTFPGAGSMIESL 216          
BLAST of CX288009 vs. ExPASy Swiss-Prot
Match: PGP_BOVIN (Phosphoglycolate phosphatase OS=Bos taurus GN=PGP PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.954e-27
Identity = 79/213 (37.09%), Postives = 113/213 (53.05%), Query Frame = 3
Query:   48 LSANNITALFDSVDAFLFDCDGVIWKGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSV-----SEDEMFSSSFAAAMYLKVN-NFPQENKVYVIGGEGILEELRQAGYTGLG-GPED--GEKRVQLKSNCLFEHDKNVGAVVVGLDPHINYYKLQYGTLCIR--ENPGCLFIATNRDAVGHLTDLQEWPGAGCMVAAM 653
            L+A    AL   VD  LFDCDGV+W+G+  + G  +TL  LR++GK+L F+TNNS ++R  YA K   LG        +  E+F +++  A+YL+     P   K YV+G   +  EL   G + +G GPE   G+         L   + +V AVVVG DPH +Y KL   T  +R  + P CL + TN D    L + +   G GC+V A+
Sbjct:   16 LNAERAQALLADVDTLLFDCDGVLWRGETAVPGAPETLTALRARGKRLAFITNNSSKTREAYAEKLRCLGFGAPAGPDAGREVFGTAYCTALYLRQRLTGPPAPKAYVLGSVALAAELEAVGVSCVGVGPEPLLGDGPGAWLDAPL---EPDVRAVVVGFDPHFSYMKL---TKAVRYLQQPDCLLVGTNMDNRLPLENGRFIAGTGCLVRAV 222          
BLAST of CX288009 vs. ExPASy Swiss-Prot
Match: PGP_HUMAN (Phosphoglycolate phosphatase OS=Homo sapiens GN=PGP PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 9.699e-27
Identity = 80/212 (37.74%), Postives = 111/212 (52.36%), Query Frame = 3
Query:   48 LSANNITALFDSVDAFLFDCDGVIWKGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVS-----VSEDEMFSSSFAAAMYL--KVNNFPQENKVYVIGGEGILEELRQAGYTGLG-GPE--DGEKRVQLKSNCLFEHDKNVGAVVVGLDPHINYYKLQYGTLCIRENPGCLFIATNRDAVGHLTDLQEWPGAGCMVAAM 653
            LSA    AL   VD  LFDCDGV+W+G+  + G  + L  LR++GK+L F+TNNS ++R  YA K   LG        +  E+F +++  A+YL  ++   P   K YV+G   +  EL   G   +G GPE   GE         L   + +V AVVVG DPH +Y KL    L   + PGCL + TN D    L + +   G GC+V A+
Sbjct:   16 LSAERAQALLADVDTLLFDCDGVLWRGETAVPGAPEALRALRARGKRLGFITNNSSKTRAAYAEKLRRLGFGGPAGPGASLEVFGTAYCTALYLRQRLAGAPAP-KAYVLGSPALAAELEAVGVASVGVGPEPLQGEGPGDWLHAPL---EPDVRAVVVGFDPHFSYMKLT-KALRYLQQPGCLLVGTNMDNRLPLENGRFIAGTGCLVRAV 222          
BLAST of CX288009 vs. ExPASy Swiss-Prot
Match: PLPP_RAT (Pyridoxal phosphate phosphatase OS=Rattus norvegicus GN=Pdxp PE=1 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 1.654e-26
Identity = 77/212 (36.32%), Postives = 107/212 (50.47%), Query Frame = 3
Query:   33 APAELLSANNITALFDSVDAFLFDCDGVIWKGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLG-VSVSEDEMFSSSFAAAMYLKVNNFP----QENKVYVIGGEGILEELRQAGYTGLGGPEDGEKRVQLKSNCLFEHDKNVGAVVVGLDPHINYYKLQYGTLCIRENPGCLFIATNRDAVGHLTDLQEWPGAGCMVAAM 653
            A  E L    +  +       LFDCDGV+W G++++ G  + L  L   GK  +FV+NNSRR+R + A +F  LG   +  +E+FSS+  AA  L+    P        V+V+GGEG+  ELR AG    G P D               D  V AV+VG D H ++ KL      +R+ P CL +AT+RD    LTD    PG G + AA+
Sbjct:    2 ARCERLRGAALRDVLGQAQGVLFDCDGVLWNGERIVPGAPELLQRLAQAGKATLFVSNNSRRARPELALRFARLGFTGLRAEELFSSAVCAARLLR-QRLPGPPDAPGAVFVLGGEGLRAELRAAGLRLAGDPGD---------------DPRVRAVLVGYDEHFSFAKLTEACAHLRD-PDCLLVATDRDPWHPLTDGSRTPGTGSLAAAV 196          
BLAST of CX288009 vs. ExPASy Swiss-Prot
Match: PGP_MOUSE (Phosphoglycolate phosphatase OS=Mus musculus GN=Pgp PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.654e-26
Identity = 77/211 (36.49%), Postives = 111/211 (52.61%), Query Frame = 3
Query:   48 LSANNITALFDSVDAFLFDCDGVIWKGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVS--VSED---EMFSSSFAAAMYL--KVNNFPQENKVYVIGGEGILEELRQAGYTGLGGPEDGEKRVQLKSNCLFEHDKNVGAVVVGLDPHINYYKLQYGTLCIR--ENPGCLFIATNRDAVGHLTDLQEWPGAGCMVAAM 653
            LSA     L   VD  LFDCDGV+W+G+  + G  +TL  LR++GK+L F+TNNS ++R  YA K   LG    V  +   E+F +++ +A+YL  ++   P + K YV+G   +  EL   G T +G   D               + +V AVVVG DPH +Y KL   T  +R  + P CL + TN D    L + +   G GC+V A+
Sbjct:   16 LSAERAKLLLAEVDTLLFDCDGVLWRGETAVPGAPETLRALRARGKRLGFITNNSSKTRTAYAEKLRRLGFGGPVGPEAGLEVFGTAYCSALYLRQRLAGVP-DPKAYVLGSPALAAELEAVGVTSVGVGPDVLHGDGPSDWLAVPLEPDVRAVVVGFDPHFSYMKL---TKAVRYLQQPDCLLVGTNMDNRLPLENGRFIAGTGCLVRAV 222          
BLAST of CX288009 vs. ExPASy Swiss-Prot
Match: PGP_CHICK (Phosphoglycolate phosphatase OS=Gallus gallus GN=PGP PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 8.211e-26
Identity = 77/206 (37.38%), Postives = 100/206 (48.54%), Query Frame = 3
Query:   48 LSANNITALFDSVDAFLFDCDGVIWKGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGVSVSED-EMFSSSFAAAMYLKVNNFPQENKVYVIGGEGILEELRQAGYTGLG-GPE--DGEKRVQLKSNCLFEHDKNVGAVVVGLDPHINYYKLQYGTLCIRENPGCLFIATNRDAVGHLTDLQEWPGAGCMVAAM 653
            L      A+  +VD  LFDCDGV+W+G+  + G    L  L + GK+L +VTNNS R+R  Y  K   LG   +E   +F S+F AA YL+    P     YV+GG  +  EL  AG   LG GP    G          L   +  V AV+VG D H +Y KL      +   P CL + TNRD    L      PG GC+V A+
Sbjct:   12 LEGETARAVLANVDTLLFDCDGVLWRGEAALSGAPAALGRLAAAGKRLCYVTNNSSRTRVAYTEKLRRLGFPPAEPRHVFGSAFCAARYLR-QALPPGAAAYVLGGPALSAELEAAGIPHLGPGPAALPGPAPADWAQAPL---EPAVRAVLVGFDEHFSYAKLCQALRYLLRGPDCLLVGTNRDNRLPLEGGSAIPGTGCLVKAV 213          
BLAST of CX288009 vs. ExPASy Swiss-Prot
Match: PLPP_HUMAN (Pyridoxal phosphate phosphatase OS=Homo sapiens GN=PDXP PE=1 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 4.075e-25
Identity = 74/212 (34.91%), Postives = 108/212 (50.94%), Query Frame = 3
Query:   33 APAELLSANNITALFDSVDAFLFDCDGVIWKGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGV-SVSEDEMFSSSFAAAMYLKVNNFP----QENKVYVIGGEGILEELRQAGYTGLGGPEDGEKRVQLKSNCLFEHDKNVGAVVVGLDPHINYYKLQYGTLCIRENPGCLFIATNRDAVGHLTDLQEWPGAGCMVAAM 653
            A  E L    +  +       LFDCDGV+W G++ + G  + L+ L   GK  +FV+NNSRR+R + A +F  LG   +  +++FSS+  AA  L+    P        V+V+GGEG+  ELR AG    G P  G+                V AV+VG D H ++ KL+     +R+ P CL +AT+RD    L+D    PG G + AA+
Sbjct:    2 ARCERLRGAALRDVLGRAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFGGLRAEQLFSSALCAARLLR-QRLPGPPDAPGAVFVLGGEGLRAELRAAGLRLAGDPSAGDGAA-----------PRVRAVLVGYDEHFSFAKLREACAHLRD-PECLLVATDRDPWHPLSDGSRTPGTGSLAAAV 200          
BLAST of CX288009 vs. ExPASy Swiss-Prot
Match: PLPP_MOUSE (Pyridoxal phosphate phosphatase OS=Mus musculus GN=Pdxp PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.641e-24
Identity = 72/211 (34.12%), Postives = 108/211 (51.18%), Query Frame = 3
Query:   33 APAELLSANNITALFDSVDAFLFDCDGVIWKGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLG-VSVSEDEMFSSSFAAAMYL--KVNNFPQ-ENKVYVIGGEGILEELRQAGYTGLGGPEDGEKRVQLKSNCLFEHDKNVGAVVVGLDPHINYYKLQYGTLCIRENPGCLFIATNRDAVGHLTDLQEWPGAGCMVAAM 653
            A  E L    +  +       LFDCDGV+W G++++ G  + L  L   GK  +FV+NNSRR+R + A +F  LG   +  +++FSS+  AA  L  +++  P     V+V+GGEG+  ELR AG    G P +               D  V AV+VG D   ++ +L      +R+ P CL +AT+RD    L+D    PG G + AA+
Sbjct:    2 ARCERLRGAALRDVLGQAQGVLFDCDGVLWNGERIVPGAPELLQRLARAGKNTLFVSNNSRRARPELALRFARLGFAGLRAEQLFSSALCAARLLRQRLSGPPDASGAVFVLGGEGLRAELRAAGLRLAGDPGE---------------DPRVRAVLVGYDEQFSFSRLTEACAHLRD-PDCLLVATDRDPWHPLSDGSRTPGTGSLAAAV 196          
BLAST of CX288009 vs. ExPASy Swiss-Prot
Match: PLPP_BOVIN (Pyridoxal phosphate phosphatase OS=Bos taurus GN=PDXP PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.641e-24
Identity = 68/190 (35.79%), Postives = 102/190 (53.68%), Query Frame = 3
Query:   96 LFDCDGVIWKGDKLIDGVRQTLDVLRSKGKKLIFVTNNSRRSRRQYAHKFHSLGV-SVSEDEMFSSSFAAAMYLK---VNNFPQENKVYVIGGEGILEELRQAGYTGLGGPEDGEKRVQLKSNCLFEHDKNVGAVVVGLDPHINYYKLQYGTLCIRENPGCLFIATNRDAVGHLTDLQEWPGAGCMVAAM 653
            LFDC+GV+W G++ + G  + L+ L   GK  +FV+NNSRR+R + A +F  LG   +  +++FSS+  AA  L+   +     +  V+V+GGEG+  ELR AG    G P +                  V AV+VG D H ++ KL      +R+ P CL +AT+RD    L+D    PG G + AA+
Sbjct:   23 LFDCNGVLWNGERAVPGAPELLERLAQAGKATLFVSNNSRRARPELALRFARLGFGGLRSEQLFSSALCAARLLRQRLLGPPDTQGAVFVLGGEGLRAELRAAGLRLAGDPSEDPGAA-----------PRVRAVLVGYDEHFSFAKLSEACAHLRD-PDCLLVATDRDPWHPLSDGSRTPGTGSLAAAV 200          
The following BLAST results are available for this feature:
BLAST of CX288009 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
PNPP_SCHPO3.805e-3136.894-nitrophenylphosphatase OS=Schizosaccharomyces po... [more]
PNPP_YEAST4.970e-3136.774-nitrophenylphosphatase OS=Saccharomyces cerevisi... [more]
PGP_BOVIN1.954e-2737.09Phosphoglycolate phosphatase OS=Bos taurus GN=PGP ... [more]
PGP_HUMAN9.699e-2737.74Phosphoglycolate phosphatase OS=Homo sapiens GN=PG... [more]
PLPP_RAT1.654e-2636.32Pyridoxal phosphate phosphatase OS=Rattus norvegic... [more]
PGP_MOUSE1.654e-2636.49Phosphoglycolate phosphatase OS=Mus musculus GN=Pg... [more]
PGP_CHICK8.211e-2637.38Phosphoglycolate phosphatase OS=Gallus gallus GN=P... [more]
PLPP_HUMAN4.075e-2534.91Pyridoxal phosphate phosphatase OS=Homo sapiens GN... [more]
PLPP_MOUSE2.641e-2434.12Pyridoxal phosphate phosphatase OS=Mus musculus GN... [more]
PLPP_BOVIN2.641e-2435.79Pyridoxal phosphate phosphatase OS=Bos taurus GN=P... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC01015G10SK Veg1 Citrus clementina cDNA clone C01015G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288009 ID=CX288009; Name=CX288009; organism=Citrus clementina; type=EST; length=661bp
GGACAGTGAGAATGAGTGGTCAAAATGGACAAGCTCCGGCTGAGCTTCTC
TCTGCAAACAACATTACAGCTCTCTTCGATTCGGTTGACGCGTTTCTCTT
CGATTGTGATGGTGTGATCTGGAAGGGCGATAAACTCATTGACGGAGTCC
GACAAACACTAGACGTGCTTCGATCAAAGGGAAAGAAGCTTATTTTTGTG
ACCAACAATTCTCGAAGATCAAGGAGACAATATGCTCATAAGTTCCATTC
TCTTGGAGTTTCGGTCTCAGAGGATGAGATGTTTTCCTCATCTTTTGCAG
CTGCCATGTACTTGAAAGTCAACAATTTTCCTCAAGAGAACAAGGTTTAT
GTTATTGGTGGTGAAGGCATATTAGAAGAGCTGCGGCAAGCTGGATATAC
AGGTCTTGGTGGCCCAGAAGATGGGGAAAAGAGGGTACAACTGAAATCAA
ATTGCTTATTTGAACATGATAAGAATGTTGGAGCAGTTGTGGTTGGATTA
GATCCGCATATTAACTATTACAAGCTTCAGTATGGAACCCTTTGCATCCG
TGAGAATCCTGGCTGCCTTTTTATTGCTACCAATCGTGATGCAGTGGGGC
ATTTGACTGATTTACAAGAGTGGCCTGGTGCCGGGTGTATGGTTGCAGCC
ATGTGTGCATC
back to top