CX288107
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288107 vs. ExPASy Swiss-Prot
Match: G3PB_PEA (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Pisum sativum GN=GAPB PE=2 SV=2) HSP 1 Score: 211.075 bits (536), Expect = 5.181e-54 Identity = 100/108 (92.59%), Postives = 102/108 (94.44%), Query Frame = 3 Query: 3 DVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVATKWPGVAAGGSGDPLEDFCQTNPADEECKVYE 326 DVNAAFRKAAEGPLKGIL VCDVPLVSVDFRCSDVS+TIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVA KWPG GSGDPLEDFC+TNPADEECKVYE Sbjct: 344 DVNAAFRKAAEGPLKGILDVCDVPLVSVDFRCSDVSTTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVANKWPGTPKVGSGDPLEDFCETNPADEECKVYE 451
BLAST of CX288107 vs. ExPASy Swiss-Prot
Match: G3PB_ARATH (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Arabidopsis thaliana GN=GAPB PE=1 SV=2) HSP 1 Score: 205.682 bits (522), Expect = 2.177e-52 Identity = 96/108 (88.89%), Postives = 101/108 (93.52%), Query Frame = 3 Query: 3 DVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVATKWPGVAAGGSGDPLEDFCQTNPADEECKVYE 326 DVN AFRKAA GP+KGIL VCD PLVSVDFRCSDVS+TIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVA+KWPG A GSGDPLEDFC+TNPADEECKVY+ Sbjct: 340 DVNEAFRKAANGPMKGILDVCDAPLVSVDFRCSDVSTTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVASKWPGAEAVGSGDPLEDFCKTNPADEECKVYD 447
BLAST of CX288107 vs. ExPASy Swiss-Prot
Match: G3PB_SPIOL (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Spinacia oleracea GN=GAPB PE=1 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.236e-47 Identity = 91/109 (83.49%), Postives = 96/109 (88.07%), Query Frame = 3 Query: 3 DVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVATKWPGVAAG-GSGDPLEDFCQTNPADEECKVYE 326 DVN AFRKAA GPLKG+L VCD+PLVSVDFRCSD SSTIDSSLTMVMG DMVKVVAWYDNEWGYSQRVVDLA LVA KWPG+ SGDPLEDFC+ NPADEECK+YE Sbjct: 343 DVNNAFRKAAAGPLKGVLDVCDIPLVSVDFRCSDFSSTIDSSLTMVMGGDMVKVVAWYDNEWGYSQRVVDLADLVANKWPGLEGSVASGDPLEDFCKDNPADEECKLYE 451
BLAST of CX288107 vs. ExPASy Swiss-Prot
Match: G3PB_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GAPB PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 2.525e-41 Identity = 76/81 (93.83%), Postives = 78/81 (96.30%), Query Frame = 3 Query: 3 DVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVATKWPG 245 DVNAAFRKAA+GPLKG+LAVCD PLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVA WPG Sbjct: 313 DVNAAFRKAADGPLKGVLAVCDEPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVANNWPG 393 HSP 2 Score: 29.261 bits (64), Expect = 2.525e-41 Identity = 13/23 (56.52%), Postives = 16/23 (69.57%), Query Frame = 1 Query: 268 THWRISARQTLLMRSAKFMKLKF 336 +HW ARQ LLMR+AK M +F Sbjct: 402 SHWMSFARQILLMRNAKSMNNRF 424
BLAST of CX288107 vs. ExPASy Swiss-Prot
Match: G3PA_SPIOL (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Spinacia oleracea GN=GAPA PE=1 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 5.042e-33 Identity = 65/79 (82.28%), Postives = 74/79 (93.67%), Query Frame = 3 Query: 3 DVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVATKW 239 +VNAAFR++A+ LKGIL+VCD PLVS+DFRC+DVSSTIDSSLTMVMGDDMVKV+AWYDNEWGYSQRVVDLA +VA KW Sbjct: 322 EVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANKW 400
BLAST of CX288107 vs. ExPASy Swiss-Prot
Match: G3PA_SINAL (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Sinapis alba GN=GAPA PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 8.600e-33 Identity = 68/79 (86.08%), Postives = 71/79 (89.87%), Query Frame = 3 Query: 3 DVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVATKW 239 +VNAAFR AAE LKGIL VCD PLVSVDFRCSDVSSTIDSSLTMVMGDDMVKV+AWYDNEWGYSQRVVDLA +VA W Sbjct: 154 EVNAAFRDAAEKELKGILDVCDEPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNW 232
BLAST of CX288107 vs. ExPASy Swiss-Prot
Match: G3PA_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GAPA PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.502e-32 Identity = 65/79 (82.28%), Postives = 73/79 (92.41%), Query Frame = 3 Query: 3 DVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVATKW 239 +VNAAFR+AA+ LKGIL VCD PLVSVDFRCSDVSST+D+SLTMVMGDDMVKV+AWYDNEWGYSQRVVDLA +VA +W Sbjct: 313 EVNAAFREAADKELKGILDVCDEPLVSVDFRCSDVSSTVDASLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANQW 391
BLAST of CX288107 vs. ExPASy Swiss-Prot
Match: G3PA_ARATH (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Arabidopsis thaliana GN=GAPA PE=1 SV=3) HSP 1 Score: 136.346 bits (342), Expect = 1.622e-31 Identity = 65/79 (82.28%), Postives = 70/79 (88.61%), Query Frame = 3 Query: 3 DVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVATKW 239 +VNAAFR +AE LKGIL VCD PLVSVDFRCSD S+TIDSSLTMVMGDDMVKV+AWYDNEWGYSQRVVDLA +VA W Sbjct: 317 EVNAAFRDSAEKELKGILDVCDEPLVSVDFRCSDFSTTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNW 395
BLAST of CX288107 vs. ExPASy Swiss-Prot
Match: G3PA_MAIZE (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Zea mays GN=GAPA PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.051e-30 Identity = 63/79 (79.75%), Postives = 69/79 (87.34%), Query Frame = 3 Query: 3 DVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVATKW 239 +VN AFR AA L GIL VCDVPLVSVDFRCSDVSSTID+SLTMVMGDDMVKV++WYDNEWGYSQRVVDLA + A +W Sbjct: 324 EVNQAFRDAAANELTGILEVCDVPLVSVDFRCSDVSSTIDASLTMVMGDDMVKVISWYDNEWGYSQRVVDLADICANQW 402
BLAST of CX288107 vs. ExPASy Swiss-Prot
Match: G3PA_PEA (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Pisum sativum GN=GAPA PE=2 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 3.059e-30 Identity = 61/79 (77.22%), Postives = 70/79 (88.61%), Query Frame = 3 Query: 3 DVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVATKW 239 +VN AFR++A L GIL+VCD PLVSVDFRC+DVSST+DSSLTMVMGDD+VKV+AWYDNEWGYSQRVVDLA +VA W Sbjct: 326 EVNEAFRESAAKELTGILSVCDEPLVSVDFRCTDVSSTVDSSLTMVMGDDLVKVIAWYDNEWGYSQRVVDLADIVANNW 404 The following BLAST results are available for this feature:
BLAST of CX288107 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 203
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288107 ID=CX288107; Name=CX288107; organism=Citrus clementina; type=EST; length=741bpback to top |