CX288156
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288156 vs. ExPASy Swiss-Prot
Match: RCA_ARATH (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Arabidopsis thaliana GN=RCA PE=1 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 3.983e-28 Identity = 57/70 (81.43%), Postives = 63/70 (90.00%), Query Frame = 3 Query: 3 EQENVKRVQLADKYLSEAALGEANADAIQSGNFYGKAAQQMNVPVPEGCTDPTAENFDPTARSDDGSCQY 212 EQENVKRVQLA+ YLS+AALG+ANADAI G FYGK AQQ+N+PVPEGCTDP AENFDPTARSDDG+C Y Sbjct: 403 EQENVKRVQLAETYLSQAALGDANADAIGRGTFYGKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVY 472
BLAST of CX288156 vs. ExPASy Swiss-Prot
Match: RCA_ORYSJ (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica GN=RCA PE=1 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 4.403e-27 Identity = 56/72 (77.78%), Postives = 67/72 (93.06%), Query Frame = 3 Query: 3 EQENVKRVQLADKYLSEAALGEANADAIQSGNFYGKAAQQM-NVPVPEGCTDPTAENFDPTARSDDGSCQYT 215 EQENVKRVQLA++YLSEAALG+AN+DA+++G+FYG+ AQQ N+PVPEGCTDP A+NFDPTARSDDGSC YT Sbjct: 394 EQENVKRVQLAEQYLSEAALGDANSDAMKTGSFYGQGAQQAGNLPVPEGCTDPVAKNFDPTARSDDGSCLYT 465
BLAST of CX288156 vs. ExPASy Swiss-Prot
Match: RCA_SPIOL (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 116.701 bits (291), Expect = 3.728e-26 Identity = 53/72 (73.61%), Postives = 63/72 (87.50%), Query Frame = 3 Query: 3 EQENVKRVQLADKYLSEAALGEANADAIQSGNFYGKAAQQMNVPVPEGCTDPTAENFDPTARSDDGSCQYTL 218 EQENVKRVQLAD+Y+S AALG+AN DAI G F+GKAAQQ+++PV +GCTDP A+N+DPTARSDDGSC Y L Sbjct: 401 EQENVKRVQLADQYMSSAALGDANKDAIDRGTFFGKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTYNL 472
BLAST of CX288156 vs. ExPASy Swiss-Prot
Match: RCAA_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplastic OS=Hordeum vulgare GN=RCAA PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 8.304e-26 Identity = 52/71 (73.24%), Postives = 63/71 (88.73%), Query Frame = 3 Query: 3 EQENVKRVQLADKYLSEAALGEANADAIQSGNFYGKAAQQMNVPVPEGCTDPTAENFDPTARSDDGSCQYT 215 EQ+NVKRVQLAD Y+S+AALG+AN DA+++G+FYGK AQQ +PVPEGCTD A+N+DPTARSDDGSC YT Sbjct: 393 EQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYT 463
BLAST of CX288156 vs. ExPASy Swiss-Prot
Match: RCA1_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 8.304e-26 Identity = 58/72 (80.56%), Postives = 64/72 (88.89%), Query Frame = 3 Query: 3 EQENVKRVQLADKYLSEAALGEANADAIQSGNFY-GKAAQQM-NVPVPEGCTDPTAENFDPTARSDDGSCQY 212 EQENVKRVQLADKY+SEAALG+AN DAI+ G FY G+AAQQ+ NVPVPEGCTDP A N+DPTARSDDGSC Y Sbjct: 403 EQENVKRVQLADKYMSEAALGDANNDAIKRGTFYGGQAAQQVGNVPVPEGCTDPQATNYDPTARSDDGSCVY 474 The following BLAST results are available for this feature:
BLAST of CX288156 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288156 ID=CX288156; Name=CX288156; organism=Citrus clementina; type=EST; length=385bpback to top |