CX288184
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288184 vs. ExPASy Swiss-Prot
Match: HS25P_ARATH (25.3 kDa heat shock protein, chloroplastic OS=Arabidopsis thaliana GN=HSP25.3 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.337e-24 Identity = 67/192 (34.90%), Postives = 100/192 (52.08%), Query Frame = -2 Query: 131 RANSKHHQPQSKKRVAPVPPVGLWDRFPTARTVQQMMETMDRMLEEPFAYSGTWPSPLPSETGGFNSRGRTPWEIKEGENEYTMRFDMPGMTKQDVKVWVEEKMLXXXXXXXXXXXXKETQVXXXXXXXXXXXXXXXGDWSAKSYGRYSSRIALPENVQFDKITAEVKDGVLYVTIPKPSHNNGRILDINVQ 706 + +S +PQ + + V P GL D RT++QM++TMDRM E+ SG + G S R PW+IKE E+E MRFDMPG++K+DVK+ VE+ +L WS +S Y +R+ LP+N + DKI AE+K+GVL++TIPK +++D+ +Q Sbjct: 64 QGSSVEKRPQQRLTM-DVSPFGLLDPLSPMRTMRQMLDTMDRMFEDTMPVSGR------NRGGSGVSEIRAPWDIKEEEHEIKMRFDMPGLSKEDVKISVEDNVL--------------------VIKGEQKKEDSDDSWSGRSVSSYGTRLQLPDNCEKDKIKAELKNGVLFITIPKTKVER-KVIDVQIQ 227
BLAST of CX288184 vs. ExPASy Swiss-Prot
Match: HS22C_SOYBN (Small heat shock protein, chloroplastic (Fragment) OS=Glycine max GN=HSP22 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.407e-23 Identity = 60/185 (32.43%), Postives = 97/185 (52.43%), Query Frame = -2 Query: 131 QPQSKKRVAPVPPVGLWDRFPTARTVQQMMETMDRMLEEPFAYSGTWPSPLPSETGGFNSRGRTPWEIKEGENEYTMRFDMPGMTKQDVKVWVEEKMLXXXXXXXXXXXXKETQVXXXXXXXXXXXXXXXGDWSAKSYGRYSSRIALPENVQFDKITAEVKDGVLYVTIPKPSHNNGRILDINVQ 685 + + ++ + P G+ D + R+++Q+++TMDR+ E+ + G GG R PW+IK+ E+E MRFDMPG+ K+DVKV VE+ ML WS+++Y Y +R+ LP+N + DK+ AE+K+GVLY+TIPK +++D+ VQ Sbjct: 24 EKKPRRTAMDISPFGILDPWSPMRSMRQILDTMDRVFEDTMTFPGR-------NIGG--GEIRAPWDIKDEEHEIRMRFDMPGLAKEDVKVSVEDDML-----------------VIKGGHKSEQEHGGDDSWSSRTYSSYDTRLKLPDNCEKDKVKAELKNGVLYITIPKTKVER-KVIDVQVQ 181
BLAST of CX288184 vs. ExPASy Swiss-Prot
Match: HS21C_PEA (Small heat shock protein, chloroplastic OS=Pisum sativum GN=HSP21 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.407e-23 Identity = 63/175 (36.00%), Postives = 93/175 (53.14%), Query Frame = -2 Query: 131 VPPVGLWDRFPTARTVQQMMETMDRMLEEPFAYSGTWPSPLPSETGGFNSRGRTPWEIKEGENEYTMRFDMPGMTKQDVKVWVEEKMLXXXXXXXXXXXXKETQVXXXXXXXXXXXXXXXGDWSAKSYGRYSSRIALPENVQFDKITAEVKDGVLYVTIPKPSHNNGRILDINVQ 655 + P GL D + R+++QM++TMDR+ E+ G GG R PWEIK+ E+E MRFDMPG++K+DVKV VE+ +L ++ WS KSY Y +R+ LP+N + +K+ AE+KDGVLY+TIPK ++D+ +Q Sbjct: 87 ISPFGLLDPWSPMRSMRQMLDTMDRIFEDAITIPGR-------NIGG--GEIRVPWEIKDEEHEIRMRFDMPGVSKEDVKVSVEDDVLVIKSDHREENGGEDC-------------------WSRKSYSCYDTRLKLPDNCEKEKVKAELKDGVLYITIPKTKIER-TVIDVQIQ 232
BLAST of CX288184 vs. ExPASy Swiss-Prot
Match: HS21C_SOLLC (Small heat shock protein, chloroplastic OS=Solanum lycopersicum GN=HSP21 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.418e-21 Identity = 62/174 (35.63%), Postives = 95/174 (54.60%), Query Frame = -2 Query: 134 VPPVGLWDRFPTARTVQQMMETMDRMLEEPFAYSGTWPSPLPSETGGFNSRGRTPWEIKEGENEYTMRFDMPGMTKQDVKVWVEEKMLXXXXXXXXXXXXKETQVXXXXXXXXXXXXXXXGDWSAKSYGRYSSRIALPENVQFDKITAEVKDGVLYVTIPKPSHNNGRILDINV 655 V P G+ D RT++QM++TMDR+ E+ + G + S TG RTPW+I + ENE MRFDMPG++K+DVKV VE ML ++ W ++Y Y +R++LP+NV DKI AE+K+GVL+++IPK + +++D+ + Sbjct: 87 VSPFGVLDPMSPMRTMRQMIDTMDRLFEDTMTFPGRNRA---SGTGEI----RTPWDIHDDENEIKMRFDMPGLSKEDVKVSVENDMLVIKGEHKKEEDGRDKH-----------------SW-GRNYSSYDTRLSLPDNVVKDKIKAELKNGVLFISIPK-TEVEKKVIDVQI 234
BLAST of CX288184 vs. ExPASy Swiss-Prot
Match: HS22C_PETHY (Small heat shock protein, chloroplastic OS=Petunia hybrida GN=HSP22 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.418e-21 Identity = 62/181 (34.25%), Postives = 95/181 (52.49%), Query Frame = -2 Query: 131 KKRVAPVPPVGLWDRFPTARTVQQMMETMDRMLEEPFAYSGTWPSPLPSETGGFNSRGRTPWEIKEGENEYTMRFDMPGMTKQDVKVWVEEKMLXXXXXXXXXXXXKETQVXXXXXXXXXXXXXXXGDWSAKSYGRYSSRIALPENVQFDKITAEVKDGVLYVTIPKPSHNNGRILDINVQ 673 ++ V P GL D RT++QMM+TMDR+ E+ T+P TG R PW+IK+ ENE MRFDMPG++K++VKV VE+ +L K+ D ++Y Y +R++LP+NV DK+ AE+K+GVL ++IPK ++ D+ ++ Sbjct: 89 RRMALDVSPFGLLDPMSPMRTMRQMMDTMDRLFEDTM----TFPGSRNRGTGEI----RAPWDIKDDENEIKMRFDMPGLSKEEVKVSVEDDVLVIKGEHKKEESGKD-------------------DSWGRNYSSYDTRLSLPDNVDKDKVKAELKNGVLLISIPKTKVEK-KVTDVEIK 241
BLAST of CX288184 vs. ExPASy Swiss-Prot
Match: HS26P_ORYSJ (26.7 kDa heat shock protein, chloroplastic OS=Oryza sativa subsp. japonica GN=HSP26.7 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.503e-18 Identity = 58/193 (30.05%), Postives = 93/193 (48.19%), Query Frame = -2 Query: 131 QRANSKHHQPQSKKRVAPVPPVGLWDRFPTARTVQQMMETMDRMLEEPFAYSGTWPSPLPSETGGFNSRGRTPWEIKEGENEYTMRFDMPGMTKQDVKVWVEEKMLXXXXXXXXXXXXKETQVXXXXXXXXXXXXXXXGDWSAKSYGRYSSRIALPENVQFDKITAEVKDGVLYVTIPKPSHNNGRILDINVQ 709 Q+ N+ +P+ + + P GL D RT++QM++TMDR+ ++ G +P S G R PW++ E + E MRFDMPG+++++VKV VE+ L W +S Y R+ALP+ K+ AE+K+GVL VT+PK + +++D+ VQ Sbjct: 67 QQGNAVQRRPRRSSALDGISPFGLVDPMSPMRTMRQMLDTMDRIFDD--VALGFPATPRRSLATG---EVRMPWDVMEDDKEVRMRFDMPGLSREEVKVMVEDDALVIRGEHKKEEGEGAEGSGDGW-------------WKERSVSSYDMRLALPDECDKSKVRAELKNGVLLVTVPK-TEVERKVIDVQVQ 240
BLAST of CX288184 vs. ExPASy Swiss-Prot
Match: HS21C_WHEAT (Small heat shock protein, chloroplastic OS=Triticum aestivum GN=HSP21 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.269e-18 Identity = 57/193 (29.53%), Postives = 95/193 (49.22%), Query Frame = -2 Query: 131 QRANSKHHQPQSKKRVAPVPPVGLWDRFPTARTVQQMMETMDRMLEEPFAYSGTWPSPLPSETGGFNSRGRTPWEIKEGENEYTMRFDMPGMTKQDVKVWVEEKMLXXXXXXXXXXXXKETQVXXXXXXXXXXXXXXXGDWSAKSYGRYSSRIALPENVQFDKITAEVKDGVLYVTIPKPSHNNGRILDINVQ 709 Q+ N+ +P ++ + P GL D RT++QM++TMDR+ ++ + T SP +R R PW+I E E E MRFDMPG+++++V+V VE+ L + + W +S Y R+ALP+ ++ AE+K+GVL V++PK +++D+ VQ Sbjct: 69 QQGNAVQRRP--RRAGFDISPFGLVDPMSPMRTMRQMLDTMDRLFDDAVGFP-TRRSPAA------RARRRMPWDIMEDEKEVKMRFDMPGLSREEVRVMVEDDALVIRGEHKKEAGEGQGEGGDGW-------------WKERSVSSYDMRLALPDECDKSQVRAELKNGVLLVSVPK-RETERKVIDVQVQ 238 The following BLAST results are available for this feature:
BLAST of CX288184 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288184 ID=CX288184; Name=CX288184; organism=Citrus clementina; type=EST; length=713bpback to top |