CX288189

BLAST of CX288189 vs. ExPASy Swiss-Prot
Match: RPB3A_ARATH (DNA-directed RNA polymerase II subunit RPB3-A OS=Arabidopsis thaliana GN=RPB36A PE=2 SV=1)

HSP 1 Score: 334.724 bits (857), Expect = 2.516e-91
Identity = 163/194 (84.02%), Postives = 179/194 (92.27%), Query Frame = 1

Query:   73 MDGASYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTSKDLYSSDHSVVPVDFVDPAGYDSTDQQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPEI 654
            MDGA+YQRFPK+KIRELKDDYAKFELR+TD SMANALRRVMI+EVPT+AIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEF L +KC +DQTLDVTS+DLYS+D +V PVDF   +    + + +GIIIVKLRRGQEL+LRAIARKGIGKDHAKWSPAATVTFMYEP+I
Sbjct:    1 MDGATYQRFPKIKIRELKDDYAKFELRETDVSMANALRRVMISEVPTVAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFRLSSKCVTDQTLDVTSRDLYSADPTVTPVDFTIDSSVSDSSEHKGIIIVKLRRGQELKLRAIARKGIGKDHAKWSPAATVTFMYEPDI 194          

BLAST of CX288189 vs. ExPASy Swiss-Prot
Match: RPB3B_ARATH (DNA-directed RNA polymerase II subunit RPB3-B OS=Arabidopsis thaliana GN=RPB36B PE=1 SV=2)

HSP 1 Score: 302.753 bits (774), Expect = 1.060e-81
Identity = 148/194 (76.29%), Postives = 169/194 (87.11%), Query Frame = 1

Query:   73 MDGASYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTSKDLYSSDHSVVPVDFVDPAGYDSTDQQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPEI 654
            MDG +YQRFP VKIRELKDDYAKFELR+TD SMANALRRVMI+EVPT+AI LV+IEVNSSVLNDEFIA RL LIPLTSERAMSMRF +DC+ C+GD  CEFCSVEF L AKC +DQTLDVTS+DLYS+D +V PVDF   +    + + +GIII KLRRGQEL+L+A+ARKGIGKDHAKWSPAATVT+MYEP+I
Sbjct:    1 MDGVTYQRFPTVKIRELKDDYAKFELRETDVSMANALRRVMISEVPTMAIHLVKIEVNSSVLNDEFIAQRLSLIPLTSERAMSMRFCQDCEDCNGDEHCEFCSVEFPLSAKCVTDQTLDVTSRDLYSADPTVTPVDFTSNSSTSDSSEHKGIIIAKLRRGQELKLKALARKGIGKDHAKWSPAATVTYMYEPDI 194          

BLAST of CX288189 vs. ExPASy Swiss-Prot
Match: RPB3_DICDI (DNA-directed RNA polymerase II subunit rpb3 OS=Dictyostelium discoideum GN=polr2c PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 4.493e-48
Identity = 100/187 (53.48%), Postives = 133/187 (71.12%), Query Frame = 1

Query:   94 RFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTSKDLYSSDHSVVPVDFVDPAGYDSTDQQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPEI 654
            R P+++I E+K+D   F L +TD S+ANALRRVMIAEVPT+ IDLVE E N+SVL DEFIAHRLGLIPL S+      ++RDC   D   +C+ CSVE  L  KC  ++  DVTS DL S + +V+PV     +   S++ ++ I IVKLRRGQE++LRAIA+KG+GK+HAKWSP+   T+ ++P I
Sbjct:   10 RQPELEILEIKNDSIIFILSNTDISVANALRRVMIAEVPTMCIDLVEFESNNSVLCDEFIAHRLGLIPLVSDNIDKFCYTRDCSCSD---RCDQCSVELRLNVKCTENRPRDVTSSDLLSQNSAVIPVS----SQVTSSNSEQEIPIVKLRRGQEIKLRAIAKKGVGKEHAKWSPSCVATYQFQPII 189          

BLAST of CX288189 vs. ExPASy Swiss-Prot
Match: RPB3_BOVIN (DNA-directed RNA polymerase II subunit RPB3 OS=Bos taurus GN=POLR2C PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.707e-47
Identity = 104/193 (53.89%), Postives = 133/193 (68.91%), Query Frame = 1

Query:   88 YQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAM-SMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTSKDLYSSDHSVVPVDF----VDPAGYDSTDQQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPE 651
            Y   P V+I EL D+  KF + +TD ++AN++RRV IAEVP IAID V+I+ NSSVL+DEFIAHRLGLIPLTS+  +  +++SRDC     +  C  CSVEF L  +C+ DQT  VTS+DL S+   V+PV       DP  Y   D    I+IVKLR+GQELRLRA A+KG GK+HAKW+P A V F Y+P+
Sbjct:    3 YANQPTVRITELTDENVKFIIENTDLAVANSIRRVFIAEVPIIAIDWVQIDANSSVLHDEFIAHRLGLIPLTSDDIVDKLQYSRDCTC---EEFCPECSVEFTLDVRCNEDQTRHVTSRDLISNSPRVIPVTSRNRDNDPNDYVEQDD---ILIVKLRKGQELRLRAYAKKGFGKEHAKWNPTAGVAFEYDPD 189          

BLAST of CX288189 vs. ExPASy Swiss-Prot
Match: RPB3_HUMAN (DNA-directed RNA polymerase II subunit RPB3 OS=Homo sapiens GN=POLR2C PE=1 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 8.473e-47
Identity = 103/193 (53.37%), Postives = 132/193 (68.39%), Query Frame = 1

Query:   88 YQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAM-SMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTSKDLYSSDHSVVPVDF----VDPAGYDSTDQQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPE 651
            Y   P V+I EL D+  KF + +TD ++AN++RRV IAEVP IAID V+I+ NSSVL+DEFIAHRLGLIPL S+  +  +++SRDC     +  C  CSVEF L  +C+ DQT  VTS+DL S+   V+PV       DP  Y   D    I+IVKLR+GQELRLRA A+KG GK+HAKW+P A V F Y+P+
Sbjct:    3 YANQPTVRITELTDENVKFIIENTDLAVANSIRRVFIAEVPIIAIDWVQIDANSSVLHDEFIAHRLGLIPLISDDIVDKLQYSRDCTC---EEFCPECSVEFTLDVRCNEDQTRHVTSRDLISNSPRVIPVTSRNRDNDPNDYVEQDD---ILIVKLRKGQELRLRAYAKKGFGKEHAKWNPTAGVAFEYDPD 189          

BLAST of CX288189 vs. ExPASy Swiss-Prot
Match: RPB3_MOUSE (DNA-directed RNA polymerase II subunit RPB3 OS=Mus musculus GN=Polr2c PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 4.649e-45
Identity = 101/193 (52.33%), Postives = 131/193 (67.88%), Query Frame = 1

Query:   88 YQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAM-SMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTSKDLYSSDHSVVPVDF----VDPAGYDSTDQQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPE 651
            Y   P V+I EL ++  KF + +TD ++AN++RRV IAEVP IAID V+I+ NSSVL+DEFIAHRLGLIPLTS+  +  +++SRDC     +  C  CSVEF L  +C+ DQT  VTS+DL S+   V+PV       DP  Y   D    I+IVKLR+GQELRLRA  +K  GK+HAKW+P A V F Y+P+
Sbjct:    3 YANQPTVRITELTEENVKFIIENTDLAVANSIRRVFIAEVPIIAIDWVQIDGNSSVLHDEFIAHRLGLIPLTSDDIVDKLQYSRDCTC---EEFCPECSVEFTLDVRCNEDQTRHVTSRDLISNSPRVIPVTSRNRDNDPNDYVEQDD---ILIVKLRKGQELRLRAYVKKRSGKEHAKWNPTAGVAFEYDPD 189          

BLAST of CX288189 vs. ExPASy Swiss-Prot
Match: RPB3_YEAST (DNA-directed RNA polymerase II subunit RPB3 OS=Saccharomyces cerevisiae GN=RPB3 PE=1 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 7.682e-40
Identity = 91/183 (49.73%), Postives = 120/183 (65.57%), Query Frame = 1

Query:  100 PKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTSKDLYSSDHSVVPVDFVDPAGYDSTDQQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEP 648
            P+VKIRE   D   F L + D +MAN+LRRVMIAE+PT+AID VE+E N++VL DEFIAHRLGLIPL S     + +SRDC   D    C+ CSV   L+A   S+ T +V SKDL     +++  +   P   D   +  G++I KLR+GQEL+L  +A+KGI K+HAKW PAA + F Y+P
Sbjct:    6 PQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCED---HCDKCSVVLTLQAFGESESTTNVYSKDLVIVS-NLMGRNIGHPIIQDK--EGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDP 182          

BLAST of CX288189 vs. ExPASy Swiss-Prot
Match: RPB3_SCHPO (DNA-directed RNA polymerase II subunit RPB3 OS=Schizosaccharomyces pombe GN=rpb3 PE=1 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 5.505e-38
Identity = 85/187 (45.45%), Postives = 121/187 (64.71%), Query Frame = 1

Query:  106 VKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSER-----AMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTSKDL-YSSDHSVVPVDFVDPAGYDSTDQQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEP 648
            + IR +  +   F L +T  ++AN+LRRV++AE+PT+AIDLVEI VN+SV+ DEF+AHRLG+IPL S        + + ++R+CD    D  C  CSVE  L AKC  + T+++ ++DL  SS+ S+      DP       + RG +I KLR+ QE+ LR IA+KGI K+HAKWSP + V F Y+P
Sbjct:    7 ITIRNISKNSVDFVLTNTSLAVANSLRRVVLAEIPTVAIDLVEINVNTSVMPDEFLAHRLGMIPLDSSNIDEPPPVGLEYTRNCDC---DQYCPKCSVELFLNAKCTGEGTMEIYARDLVVSSNSSLGHPILADP-------KSRGPLICKLRKEQEISLRCIAKKGIAKEHAKWSPTSAVAFEYDP 183          

BLAST of CX288189 vs. ExPASy Swiss-Prot
Match: CNJC_TETTH (Conjugation stage-specific protein OS=Tetrahymena thermophila GN=CNJC PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.477e-30
Identity = 72/190 (37.89%), Postives = 115/190 (60.53%), Query Frame = 1

Query:  103 KVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTSKDL-----YSSDHSVVPVDFVDPAGYD-STDQQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPEI 654
            K+ +  L++   +F L + D S+AN+LRR+++AE+ TIAI  V++  N+S L DE+IAHRLGLIPL S +     +  +C+     G+C+ C++ F LR    +++ L+VTS DL     ++ + +V P+        +    ++ GI I+KL +GQ++     A+KGIGK H+KW+P    TF  EPEI
Sbjct:    5 KLTLTNLEEFKCEFTLENCDISLANSLRRILLAEIETIAIHNVKVYENTSSLPDEYIAHRLGLIPLNSAKVDDYNYIWNCNC---QGECDRCTIHFDLRVSNFTNEVLEVTSLDLKQRQDHTDEDAVRPIKVYSILRDEYGNKREVGIPIIKLSKGQQIHFECEAQKGIGKMHSKWNPVCISTFSVEPEI 191          

BLAST of CX288189 vs. ExPASy Swiss-Prot
Match: RPOD_METST (DNA-directed RNA polymerase subunit D OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rpoD PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.272e-26
Identity = 71/184 (38.59%), Postives = 103/184 (55.98%), Query Frame = 1

Query:  106 VKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKC-HSDQTLDVTSKDLYSSDHSVVPVDFVDPAGYDSTDQQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPEI 654
            ++IRE  D+ A F +   D +  N +RR+ + E+PT+AI+ V I  N + + DE +AHRLGLIP+ ++    +  S     CD +  C+ C V F L+ KC   + +  V SKDL S D +V PV       YD+      I IV+LR G+E+ L AIA  G+G +HAKW    T  + Y P+I
Sbjct:    3 IEIREKDDERAVFVVEGVDDTFINTIRRICLVEIPTLAIEDVNIYKNDAKMFDEVLAHRLGLIPIVTDLDSYVMPSE----CDCESGCQHCRVSFLLKEKCEEGNDSKIVYSKDLKSDDPAVKPV-------YDT------IPIVRLREGEEVELEAIAELGLGSEHAKWQATTTCGYKYYPKI 169