CX288196
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288196 vs. ExPASy Swiss-Prot
Match: NH2L1_XENTR (NHP2-like protein 1 OS=Xenopus tropicalis GN=nhp2l1 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 8.452e-23 Identity = 54/64 (84.38%), Postives = 57/64 (89.06%), Query Frame = 2 Query: 461 MTGEAVNPKAYPLADSNLTITILDLVQQAANYKQLXKGANEATKTLNRGISEFIVMAADTEPLE 652 MT VNPKAYPLAD+ LT T+LDLVQQAANYKQL KGANEATKTLNRGI+EFIVMAAD EPLE Sbjct: 1 MTEPEVNPKAYPLADAQLTKTLLDLVQQAANYKQLRKGANEATKTLNRGIAEFIVMAADAEPLE 64
BLAST of CX288196 vs. ExPASy Swiss-Prot
Match: NH2L1_XENLA (NHP2-like protein 1 OS=Xenopus laevis GN=nhp2l1 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.883e-22 Identity = 53/64 (82.81%), Postives = 57/64 (89.06%), Query Frame = 2 Query: 461 MTGEAVNPKAYPLADSNLTITILDLVQQAANYKQLXKGANEATKTLNRGISEFIVMAADTEPLE 652 MT VNPKAYPLAD+ LT T+LDLVQQ+ANYKQL KGANEATKTLNRGI+EFIVMAAD EPLE Sbjct: 1 MTEPEVNPKAYPLADAQLTKTLLDLVQQSANYKQLRKGANEATKTLNRGIAEFIVMAADAEPLE 64
BLAST of CX288196 vs. ExPASy Swiss-Prot
Match: NH2L1_RAT (NHP2-like protein 1 OS=Rattus norvegicus GN=Nhp2l1 PE=2 SV=4) HSP 1 Score: 103.219 bits (256), Expect = 1.220e-21 Identity = 52/64 (81.25%), Postives = 56/64 (87.50%), Query Frame = 2 Query: 461 MTGEAVNPKAYPLADSNLTITILDLVQQAANYKQLXKGANEATKTLNRGISEFIVMAADTEPLE 652 MT VNPKAYPLAD++LT +LDLVQQ+ NYKQL KGANEATKTLNRGISEFIVMAAD EPLE Sbjct: 1 MTEADVNPKAYPLADAHLTKKLLDLVQQSCNYKQLRKGANEATKTLNRGISEFIVMAADAEPLE 64
BLAST of CX288196 vs. ExPASy Swiss-Prot
Match: NH2L1_MOUSE (NHP2-like protein 1 OS=Mus musculus GN=Nhp2l1 PE=2 SV=4) HSP 1 Score: 103.219 bits (256), Expect = 1.220e-21 Identity = 52/64 (81.25%), Postives = 56/64 (87.50%), Query Frame = 2 Query: 461 MTGEAVNPKAYPLADSNLTITILDLVQQAANYKQLXKGANEATKTLNRGISEFIVMAADTEPLE 652 MT VNPKAYPLAD++LT +LDLVQQ+ NYKQL KGANEATKTLNRGISEFIVMAAD EPLE Sbjct: 1 MTEADVNPKAYPLADAHLTKKLLDLVQQSCNYKQLRKGANEATKTLNRGISEFIVMAADAEPLE 64
BLAST of CX288196 vs. ExPASy Swiss-Prot
Match: NH2L1_MACFA (NHP2-like protein 1 OS=Macaca fascicularis GN=NHP2L1 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.220e-21 Identity = 52/64 (81.25%), Postives = 56/64 (87.50%), Query Frame = 2 Query: 461 MTGEAVNPKAYPLADSNLTITILDLVQQAANYKQLXKGANEATKTLNRGISEFIVMAADTEPLE 652 MT VNPKAYPLAD++LT +LDLVQQ+ NYKQL KGANEATKTLNRGISEFIVMAAD EPLE Sbjct: 1 MTEADVNPKAYPLADAHLTKKLLDLVQQSCNYKQLRKGANEATKTLNRGISEFIVMAADAEPLE 64
BLAST of CX288196 vs. ExPASy Swiss-Prot
Match: NH2L1_HUMAN (NHP2-like protein 1 OS=Homo sapiens GN=NHP2L1 PE=1 SV=3) HSP 1 Score: 103.219 bits (256), Expect = 1.220e-21 Identity = 52/64 (81.25%), Postives = 56/64 (87.50%), Query Frame = 2 Query: 461 MTGEAVNPKAYPLADSNLTITILDLVQQAANYKQLXKGANEATKTLNRGISEFIVMAADTEPLE 652 MT VNPKAYPLAD++LT +LDLVQQ+ NYKQL KGANEATKTLNRGISEFIVMAAD EPLE Sbjct: 1 MTEADVNPKAYPLADAHLTKKLLDLVQQSCNYKQLRKGANEATKTLNRGISEFIVMAADAEPLE 64
BLAST of CX288196 vs. ExPASy Swiss-Prot
Match: NH2L1_BOVIN (NHP2-like protein 1 OS=Bos taurus GN=NHP2L1 PE=2 SV=3) HSP 1 Score: 103.219 bits (256), Expect = 1.220e-21 Identity = 52/64 (81.25%), Postives = 56/64 (87.50%), Query Frame = 2 Query: 461 MTGEAVNPKAYPLADSNLTITILDLVQQAANYKQLXKGANEATKTLNRGISEFIVMAADTEPLE 652 MT VNPKAYPLAD++LT +LDLVQQ+ NYKQL KGANEATKTLNRGISEFIVMAAD EPLE Sbjct: 1 MTEADVNPKAYPLADAHLTKKLLDLVQQSCNYKQLRKGANEATKTLNRGISEFIVMAADAEPLE 64
BLAST of CX288196 vs. ExPASy Swiss-Prot
Match: SNU13_SCHPO (13 kDa ribonucleoprotein-associated protein OS=Schizosaccharomyces pombe GN=snu13 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.082e-21 Identity = 51/60 (85.00%), Postives = 56/60 (93.33%), Query Frame = 2 Query: 473 AVNPKAYPLADSNLTITILDLVQQAANYKQLXKGANEATKTLNRGISEFIVMAADTEPLE 652 +VNPKA+PLADS LT ILDLVQQA++YKQL KGANEATKTLNRGISEFIVMAADTEP+E Sbjct: 2 SVNPKAFPLADSGLTQQILDLVQQASHYKQLRKGANEATKTLNRGISEFIVMAADTEPIE 61
BLAST of CX288196 vs. ExPASy Swiss-Prot
Match: NH2L1_CAEEL (NHP2-like protein 1 homolog OS=Caenorhabditis elegans GN=M28.5 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.033e-20 Identity = 49/64 (76.56%), Postives = 55/64 (85.94%), Query Frame = 2 Query: 461 MTGEAVNPKAYPLADSNLTITILDLVQQAANYKQLXKGANEATKTLNRGISEFIVMAADTEPLE 652 M + VNPKA+PLAD+NL+ ++DLVQQA NYKQL KGANEATKTLNRGISE IVMAAD EPLE Sbjct: 1 MADDGVNPKAFPLADTNLSQKLMDLVQQAMNYKQLKKGANEATKTLNRGISEIIVMAADAEPLE 64
BLAST of CX288196 vs. ExPASy Swiss-Prot
Match: SNU13_USTMA (13 kDa ribonucleoprotein-associated protein OS=Ustilago maydis GN=SNU13 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.949e-19 Identity = 47/60 (78.33%), Postives = 53/60 (88.33%), Query Frame = 2 Query: 473 AVNPKAYPLADSNLTITILDLVQQAANYKQLXKGANEATKTLNRGISEFIVMAADTEPLE 652 A NPKA+PLAD+ LT ILDL+QQA++YKQL KGANEATKTLNRGI EFIVMAAD EP+E Sbjct: 3 APNPKAFPLADATLTNQILDLIQQASHYKQLKKGANEATKTLNRGICEFIVMAADVEPIE 62 The following BLAST results are available for this feature:
BLAST of CX288196 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288196 ID=CX288196; Name=CX288196; organism=Citrus clementina; type=EST; length=653bpback to top |