CX288197
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288197 vs. ExPASy Swiss-Prot
Match: RK2_CITSI (50S ribosomal protein L2, chloroplastic OS=Citrus sinensis GN=rpl2-A PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.179e-16 Identity = 39/39 (100.00%), Postives = 39/39 (100.00%), Query Frame = 2 Query: 2 RAPIGRKRPATPWGYPALGRRSRKRNKYSDNLILRRRTK 118 RAPIGRKRPATPWGYPALGRRSRKRNKYSDNLILRRRTK Sbjct: 236 RAPIGRKRPATPWGYPALGRRSRKRNKYSDNLILRRRTK 274
BLAST of CX288197 vs. ExPASy Swiss-Prot
Match: RK2_POPTR (50S ribosomal protein L2, chloroplastic OS=Populus trichocarpa GN=rpl2-A PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.644e-16 Identity = 37/39 (94.87%), Postives = 39/39 (100.00%), Query Frame = 2 Query: 2 RAPIGRKRPATPWGYPALGRRSRKRNKYSDNLILRRRTK 118 RAPIGRK+PATPWGYPALGRRSRKRNKYSDNLILRRR+K Sbjct: 236 RAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 274
BLAST of CX288197 vs. ExPASy Swiss-Prot
Match: RK2_MORIN (50S ribosomal protein L2, chloroplastic OS=Morus indica GN=rpl2-A PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.644e-16 Identity = 37/39 (94.87%), Postives = 39/39 (100.00%), Query Frame = 2 Query: 2 RAPIGRKRPATPWGYPALGRRSRKRNKYSDNLILRRRTK 118 RAPIGRK+PATPWGYPALGRRSRKRNKYSDNLILRRR+K Sbjct: 236 RAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 274
BLAST of CX288197 vs. ExPASy Swiss-Prot
Match: RK2_MANES (50S ribosomal protein L2, chloroplastic OS=Manihot esculenta GN=rpl2-A PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.644e-16 Identity = 37/39 (94.87%), Postives = 39/39 (100.00%), Query Frame = 2 Query: 2 RAPIGRKRPATPWGYPALGRRSRKRNKYSDNLILRRRTK 118 RAPIGRK+PATPWGYPALGRRSRKRNKYSDNLILRRR+K Sbjct: 239 RAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 277
BLAST of CX288197 vs. ExPASy Swiss-Prot
Match: RK2_GOSHI (50S ribosomal protein L2, chloroplastic OS=Gossypium hirsutum GN=rpl2-A PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.644e-16 Identity = 37/39 (94.87%), Postives = 39/39 (100.00%), Query Frame = 2 Query: 2 RAPIGRKRPATPWGYPALGRRSRKRNKYSDNLILRRRTK 118 RAPIGRK+PATPWGYPALGRRSRKRNKYSDNLILRRR+K Sbjct: 236 RAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 274
BLAST of CX288197 vs. ExPASy Swiss-Prot
Match: RK2_CUCSA (50S ribosomal protein L2, chloroplastic OS=Cucumis sativus GN=rpl2-A PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.644e-16 Identity = 37/39 (94.87%), Postives = 39/39 (100.00%), Query Frame = 2 Query: 2 RAPIGRKRPATPWGYPALGRRSRKRNKYSDNLILRRRTK 118 RAPIGRK+PATPWGYPALGRRSRKRNKYSDNLILRRR+K Sbjct: 236 RAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 274
BLAST of CX288197 vs. ExPASy Swiss-Prot
Match: RK2_CARPA (50S ribosomal protein L2, chloroplastic OS=Carica papaya GN=rpl2-A PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.644e-16 Identity = 37/39 (94.87%), Postives = 39/39 (100.00%), Query Frame = 2 Query: 2 RAPIGRKRPATPWGYPALGRRSRKRNKYSDNLILRRRTK 118 RAPIGRK+PATPWGYPALGRRSRKRNKYSDNLILRRR+K Sbjct: 236 RAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 274
BLAST of CX288197 vs. ExPASy Swiss-Prot
Match: RK2B_POPAL (50S ribosomal protein L2-B, chloroplastic OS=Populus alba GN=rpl2-B PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.644e-16 Identity = 37/39 (94.87%), Postives = 39/39 (100.00%), Query Frame = 2 Query: 2 RAPIGRKRPATPWGYPALGRRSRKRNKYSDNLILRRRTK 118 RAPIGRK+PATPWGYPALGRRSRKRNKYSDNLILRRR+K Sbjct: 236 RAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 274
BLAST of CX288197 vs. ExPASy Swiss-Prot
Match: RK2A_POPAL (50S ribosomal protein L2-A, chloroplastic OS=Populus alba GN=rpl2-A PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.644e-16 Identity = 37/39 (94.87%), Postives = 39/39 (100.00%), Query Frame = 2 Query: 2 RAPIGRKRPATPWGYPALGRRSRKRNKYSDNLILRRRTK 118 RAPIGRK+PATPWGYPALGRRSRKRNKYSDNLILRRR+K Sbjct: 237 RAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 275
BLAST of CX288197 vs. ExPASy Swiss-Prot
Match: RK2_VITVI (50S ribosomal protein L2, chloroplastic OS=Vitis vinifera GN=rpl2-A PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.224e-15 Identity = 36/39 (92.31%), Postives = 38/39 (97.44%), Query Frame = 2 Query: 2 RAPIGRKRPATPWGYPALGRRSRKRNKYSDNLILRRRTK 118 RAPIGRK+P TPWGYPALGRRSRKRNKYSDNLILRRR+K Sbjct: 236 RAPIGRKKPTTPWGYPALGRRSRKRNKYSDNLILRRRSK 274 The following BLAST results are available for this feature:
BLAST of CX288197 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 97
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288197 ID=CX288197; Name=CX288197; organism=Citrus clementina; type=EST; length=178bpback to top |