CX288203
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288203 vs. ExPASy Swiss-Prot
Match: EFTU1_SOYBN (Elongation factor Tu, chloroplastic OS=Glycine max GN=TUFA PE=3 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 2.836e-58 Identity = 110/121 (90.91%), Postives = 116/121 (95.87%), Query Frame = 1 Query: 4 IRHEEKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 366 +R +K DIQRGMVLAKPGTITPHTKF AIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTG+V+SIMNDKDEES MV+PGDRVKMVVELI+PVACEQGMRFAIREGGKTVGAGVIQSIIE Sbjct: 359 LRGVQKTDIQRGMVLAKPGTITPHTKFSAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTSIMNDKDEESTMVLPGDRVKMVVELIVPVACEQGMRFAIREGGKTVGAGVIQSIIE 479
BLAST of CX288203 vs. ExPASy Swiss-Prot
Match: EFTU2_SOYBN (Elongation factor Tu, chloroplastic OS=Glycine max GN=TUFB1 PE=3 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 4.838e-58 Identity = 109/121 (90.08%), Postives = 116/121 (95.87%), Query Frame = 1 Query: 4 IRHEEKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 366 +R +K DIQRGMVLAKPGTITPHTKF AIVYVLKKEEGGRHSPFF+GYRPQFYMRTTDVTG+V+ IMNDKDEESKMVMPGDRVK+VVELI+PVACEQGMRFAIREGGKTVGAGVIQSIIE Sbjct: 359 LRGIQKTDIQRGMVLAKPGTITPHTKFSAIVYVLKKEEGGRHSPFFSGYRPQFYMRTTDVTGKVTEIMNDKDEESKMVMPGDRVKLVVELIVPVACEQGMRFAIREGGKTVGAGVIQSIIE 479
BLAST of CX288203 vs. ExPASy Swiss-Prot
Match: EFTU_ARATH (Elongation factor Tu, chloroplastic OS=Arabidopsis thaliana GN=TUFA PE=1 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 1.192e-56 Identity = 106/121 (87.60%), Postives = 116/121 (95.87%), Query Frame = 1 Query: 4 IRHEEKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 366 +R +KADIQRGMVLAKPG+ITPHTKF AI+YVLKKEEGGRHSPFFAGYRPQFYMRTTDVTG+V+ IMNDKDEESKMVMPGDRVK+VVELI+PVACEQGMRFAIREGGKTVGAGVI +I+E Sbjct: 356 LRGIQKADIQRGMVLAKPGSITPHTKFEAIIYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTKIMNDKDEESKMVMPGDRVKIVVELIVPVACEQGMRFAIREGGKTVGAGVIGTILE 476
BLAST of CX288203 vs. ExPASy Swiss-Prot
Match: EFTU_PEA (Elongation factor Tu, chloroplastic OS=Pisum sativum GN=tufA PE=2 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 7.724e-56 Identity = 107/121 (88.43%), Postives = 115/121 (95.04%), Query Frame = 1 Query: 4 IRHEEKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 366 +R +K DIQRGMVLAKPGTITPH+KF AIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTG+V+SIMNDKDEESKMVMPGDRVK+VVELI+PVA EQGMRFAIREGGKTVGAGVI +IIE Sbjct: 368 LRGIQKIDIQRGMVLAKPGTITPHSKFSAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTSIMNDKDEESKMVMPGDRVKIVVELIVPVAIEQGMRFAIREGGKTVGAGVIGAIIE 488
BLAST of CX288203 vs. ExPASy Swiss-Prot
Match: EFTUB_NICSY (Elongation factor TuB, chloroplastic OS=Nicotiana sylvestris GN=TUFB PE=2 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 7.724e-56 Identity = 106/121 (87.60%), Postives = 113/121 (93.39%), Query Frame = 1 Query: 4 IRHEEKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 366 +R +K DIQRGMVLAKPGTITPHTKF A+VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTG+V+ IM+DK EESKMVMPGDRV MVVELIMPVACEQGMRFAIREGGKTVGAGVIQ I+E Sbjct: 365 LRGIQKIDIQRGMVLAKPGTITPHTKFEALVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTVIMSDKGEESKMVMPGDRVNMVVELIMPVACEQGMRFAIREGGKTVGAGVIQKILE 485
BLAST of CX288203 vs. ExPASy Swiss-Prot
Match: EFTU_TOBAC (Elongation factor Tu, chloroplastic OS=Nicotiana tabacum GN=TUFA PE=3 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 1.721e-55 Identity = 106/121 (87.60%), Postives = 112/121 (92.56%), Query Frame = 1 Query: 4 IRHEEKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 366 +R +K DIQRGMVLAKPGTITPHTKF AIVYVLKKEEGGRHSPFF+GYRPQFYMRTTDVTG+V+SI DK EESKMVMPGDRV +VVELIMPVACEQGMRFAIREGGKTVGAGVIQ IIE Sbjct: 358 LRGIQKIDIQRGMVLAKPGTITPHTKFEAIVYVLKKEEGGRHSPFFSGYRPQFYMRTTDVTGKVTSITTDKGEESKMVMPGDRVNLVVELIMPVACEQGMRFAIREGGKTVGAGVIQKIIE 478
BLAST of CX288203 vs. ExPASy Swiss-Prot
Match: EFTUA_NICSY (Elongation factor TuA, chloroplastic OS=Nicotiana sylvestris GN=TUFA PE=2 SV=2) HSP 1 Score: 214.927 bits (546), Expect = 1.721e-55 Identity = 106/121 (87.60%), Postives = 112/121 (92.56%), Query Frame = 1 Query: 4 IRHEEKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 366 +R +K DIQRGMVLAKPGTITPHTKF AIVYVLKKEEGGRHSPFF+GYRPQFYMRTTDVTG+V+SI DK EESKMVMPGDRV +VVELIMPVACEQGMRFAIREGGKTVGAGVIQ IIE Sbjct: 358 LRGIQKIDIQRGMVLAKPGTITPHTKFEAIVYVLKKEEGGRHSPFFSGYRPQFYMRTTDVTGKVTSITTDKGEESKMVMPGDRVNLVVELIMPVACEQGMRFAIREGGKTVGAGVIQKIIE 478
BLAST of CX288203 vs. ExPASy Swiss-Prot
Match: EFTU_OSTTA (Elongation factor Tu, chloroplastic OS=Ostreococcus tauri GN=tufA PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 7.742e-48 Identity = 89/121 (73.55%), Postives = 107/121 (88.43%), Query Frame = 1 Query: 4 IRHEEKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 366 +R +K DI+RGMVLA+PGTITPHTKF A VYVLKKEEGGRH+PFF GYRPQFY+RTTDVTG++ S ++D+ +E+ MVMPGDRVKMVVELI P+A E GMRFAIREGG+TVGAGV+ SI++ Sbjct: 289 LRGIQKEDIERGMVLAQPGTITPHTKFEAQVYVLKKEEGGRHTPFFPGYRPQFYVRTTDVTGKIESFISDEGDEATMVMPGDRVKMVVELIQPIAIENGMRFAIREGGRTVGAGVVSSILK 409
BLAST of CX288203 vs. ExPASy Swiss-Prot
Match: EFTU_LEPTE (Elongation factor Tu, chloroplastic OS=Leptosira terrestris GN=tufA PE=3 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 7.246e-46 Identity = 83/120 (69.17%), Postives = 104/120 (86.67%), Query Frame = 1 Query: 4 IRHEEKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 363 +R +K DIQRGMVLAKPG+ITPHTKF A VY+L ++EGGRH+PFFAGYRPQFY+RTTDVTG++ + D D+ ++MVMPGDR+KM VELI P+A E+GMRFAIREGG+TVGAGV+ +I+ Sbjct: 289 LRGIQKIDIQRGMVLAKPGSITPHTKFTAQVYILTRDEGGRHTPFFAGYRPQFYVRTTDVTGKIETFRTDDDQPTQMVMPGDRIKMEVELIQPIAIEKGMRFAIREGGRTVGAGVVSAIV 408
BLAST of CX288203 vs. ExPASy Swiss-Prot
Match: EFTU_SYNPW (Elongation factor Tu OS=Synechococcus sp. (strain WH7803) GN=tuf PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 6.134e-45 Identity = 85/121 (70.25%), Postives = 101/121 (83.47%), Query Frame = 1 Query: 4 IRHEEKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 366 +R +K DI+RGMVL KPG+ITPHTKF VYVLKKEEGGRH+PFFAGYRPQFY+RTTDVTG++++ D + +MVMPGDR+KM ELI PVA EQGMRFAIREGG+T+GAGV+ IIE Sbjct: 279 LRGIQKEDIERGMVLVKPGSITPHTKFEGEVYVLKKEEGGRHTPFFAGYRPQFYIRTTDVTGQITAFTADDGSDVEMVMPGDRIKMTGELICPVAIEQGMRFAIREGGRTIGAGVVSKIIE 399 The following BLAST results are available for this feature:
BLAST of CX288203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288203 ID=CX288203; Name=CX288203; organism=Citrus clementina; type=EST; length=514bpback to top |