CX288293
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_ARATH (Alanyl-tRNA synthetase, mitochondrial OS=Arabidopsis thaliana GN=ALATS PE=1 SV=3) HSP 1 Score: 181.03 bits (458), Expect = 4.936e-45 Identity = 88/102 (86.27%), Postives = 95/102 (93.14%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAEF 308 H+DQKGS+VLPEKLRFDFSHGKPVDPE LRRIESIVN+QIK ELDVFSKEA L+EAKRI GLRAVFGEVYPDPVRVV+IGRKVEDLLADPEN EW +S+EF Sbjct: 663 HIDQKGSIVLPEKLRFDFSHGKPVDPEDLRRIESIVNKQIKDELDVFSKEAVLSEAKRIKGLRAVFGEVYPDPVRVVSIGRKVEDLLADPENNEWSLLSSEF 764
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYAC_YEAST (Alanyl-tRNA synthetase, cytoplasmic OS=Saccharomyces cerevisiae GN=ALA1 PE=1 SV=2) HSP 1 Score: 131.724 bits (330), Expect = 3.434e-30 Identity = 64/101 (63.37%), Postives = 77/101 (76.24%), Query Frame = 3 Query: 6 VDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAEF 308 VDQKGS+V PEKLRFDFSH K V E L+++E I NEQIK L VF KE L AK I+G+RAVFGE YPDPVRVV++G+ +E+LLA+P N+EW S EF Sbjct: 618 VDQKGSLVAPEKLRFDFSHKKAVSNEELKKVEDICNEQIKENLQVFYKEIPLDLAKSIDGVRAVFGETYPDPVRVVSVGKPIEELLANPANEEWTKYSIEF 718
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_DICDI (Alanyl-tRNA synthetase OS=Dictyostelium discoideum GN=alaS PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.008e-26 Identity = 57/101 (56.44%), Postives = 75/101 (74.26%), Query Frame = 3 Query: 6 VDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAEF 308 +DQ+GS V ++ RFDFS G+ + + L +I+ IVN+QI +LDV +KE LA AK+INGLRAVFGEVYPDPVRVV++G VE L+ +P N EW + S EF Sbjct: 609 IDQRGSFVDAQRFRFDFSFGRAITKDELIKIDQIVNDQIFKQLDVHAKEVGLASAKKINGLRAVFGEVYPDPVRVVSVGVPVEQLIENPTNPEWANYSIEF 709
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYAC_SCHPO (Probable alanyl-tRNA synthetase, cytoplasmic OS=Schizosaccharomyces pombe GN=SPAC23C11.09 PE=1 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.384e-23 Identity = 53/101 (52.48%), Postives = 70/101 (69.31%), Query Frame = 3 Query: 6 VDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAEF 308 +DQ+GS+V EKLRFDFS+ + + L +E+ N I+ L V+SKE L++AK INGLRAVFGEVYPDPVRVV IG ++ LL +P+ +W S EF Sbjct: 624 IDQRGSLVSQEKLRFDFSYKSSIPIDKLLLVENYCNNVIQDNLSVYSKEVALSKAKEINGLRAVFGEVYPDPVRVVCIGVDIDTLLQEPKKPDWTKYSIEF 724
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYAC_PONAB (Alanyl-tRNA synthetase, cytoplasmic OS=Pongo abelii GN=AARS PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.374e-20 Identity = 49/100 (49.00%), Postives = 66/100 (66.00%), Query Frame = 3 Query: 9 DQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAEF 308 DQKGS+V P++LRFDF+ + + +++ E I NE I+A V++++ +LA AK I GLRAVF E YPDPVRVV+IG V +LL DP S EF Sbjct: 623 DQKGSLVAPDRLRFDFTAKGAMSTQQIKKAEEIANEMIEAAKPVYTQDCSLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTSVEF 722
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYAC_HUMAN (Alanyl-tRNA synthetase, cytoplasmic OS=Homo sapiens GN=AARS PE=1 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 2.088e-19 Identity = 49/100 (49.00%), Postives = 65/100 (65.00%), Query Frame = 3 Query: 9 DQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAEF 308 DQKGS+V P++LRFDF+ + + +++ E I NE I+A V++++ LA AK I GLRAVF E YPDPVRVV+IG V +LL DP S EF Sbjct: 623 DQKGSLVAPDRLRFDFTAKGAMSTQQIKKAEEIANEMIEAAKAVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTSVEF 722
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYAC_RAT (Alanyl-tRNA synthetase, cytoplasmic OS=Rattus norvegicus GN=Aars PE=1 SV=3) HSP 1 Score: 95.1301 bits (235), Expect = 3.562e-19 Identity = 50/100 (50.00%), Postives = 64/100 (64.00%), Query Frame = 3 Query: 9 DQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAEF 308 DQKGS+V P++LRFDF+ + E +++ E IVN I+A V++ + LA AK I GLRAVF E YPDPVRVV+IG V +LL DP S EF Sbjct: 623 DQKGSLVAPDRLRFDFTAKGAMSTEQIKKTEEIVNGMIEAAKPVYTLDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTSVEF 722
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYAC_MESAU (Alanyl-tRNA synthetase, cytoplasmic OS=Mesocricetus auratus GN=AARS PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.652e-19 Identity = 49/100 (49.00%), Postives = 64/100 (64.00%), Query Frame = 3 Query: 9 DQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAEF 308 DQKGS+V P++LRFDF+ + + ++ E IVN I+A V++++ LA AK I GLRAVF E YPDPVRVV+IG V +LL DP S EF Sbjct: 623 DQKGSLVAPDRLRFDFTAKGAMSTQQIKEAEEIVNAMIEAAKPVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTSVEF 722
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYAC_BOMMO (Alanyl-tRNA synthetase, cytoplasmic OS=Bombyx mori PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.935e-19 Identity = 45/100 (45.00%), Postives = 69/100 (69.00%), Query Frame = 3 Query: 9 DQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAEF 308 DQ+GS+V+P++LRFDF++ P+ + ++ E+ + E I V++ +L+EAK+INGLRA+F E YPDPVRVV++G VEDL+ +P+ S EF Sbjct: 624 DQRGSLVMPDRLRFDFTNKGPMTIKQIKDTENEIKEIIAKNKTVYANYTSLSEAKKINGLRAMFDEHYPDPVRVVSVGVPVEDLIKNPDAPTGFETSVEF 723
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYAC_MOUSE (Alanyl-tRNA synthetase, cytoplasmic OS=Mus musculus GN=Aars PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.036e-18 Identity = 49/100 (49.00%), Postives = 65/100 (65.00%), Query Frame = 3 Query: 9 DQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAEF 308 DQKGS+V P++LRFDF+ + + +++ E IVN I+A V++++ LA AK I GLRAVF E YPDPVRVV+IG V +LL DP S EF Sbjct: 623 DQKGSLVAPDRLRFDFTAKGAMSTQQIKKAEEIVNGMIEAAKPVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPCGPAGSLTSVEF 722 The following BLAST results are available for this feature:
BLAST of CX288293 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 263
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288293 ID=CX288293; Name=CX288293; organism=Citrus clementina; type=EST; length=682bpback to top |