CX288295

Overview
NameCX288295
Unique NameCX288295
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length680
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig7330 contig Ccv1_Contig7330:84..763. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX288295 vs. ExPASy Swiss-Prot
Match: BEH4_ARATH (BES1/BZR1 homolog protein 4 OS=Arabidopsis thaliana GN=BEH4 PE=1 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 5.634e-49
Identity = 108/220 (49.09%), Postives = 122/220 (55.45%), Query Frame = 3
Query:   33 MTSGTRMPTWXXXXXXXXXXXXXXAIAAKIYAGLRMYGNYRLPKHCDNNEVLKALCNEAGWTVEEDGTTYRKGC-KPVEYMDVMGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHYTPHANGSADANSLIPWLKNLXXXXXXXXXKD---PHHMYIHGGSISAPVTPPLSSPTCRTPRTKNDWDEPTAVAAWAGQHYPFLPSSTPPSPGRQVLPD 680
            MTSGTRMPTW              AIAAKI+ GLRMYGNY LPKHCDNNEVLKALCNEAGW VE DGTTYRKGC +PVE M++ GG                                  +    +G  D  SLIPWLK+L              P+++YI GGSISAPVTPPLSSPT RTPR   DW +          +  F  SSTPPSP RQ++PD
Sbjct:    1 MTSGTRMPTWRERENNKRRERRRRAIAAKIFTGLRMYGNYELPKHCDNNEVLKALCNEAGWIVEPDGTTYRKGCSRPVERMEIGGGSATASPCSSYQPSPCASYNPSPGSSNFMSPASSSFANLTSG--DGQSLIPWLKHLSTTSSSSASSSSRLPNYLYIPGGSISAPVTPPLSSPTARTPRMNTDWQQ---------LNNSFFVSSTPPSPTRQIIPD 209          
BLAST of CX288295 vs. ExPASy Swiss-Prot
Match: BEH3_ARATH (BES1/BZR1 homolog protein 3 OS=Arabidopsis thaliana GN=BEH3 PE=1 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 5.844e-38
Identity = 88/176 (50.00%), Postives = 101/176 (57.39%), Query Frame = 3
Query:   33 MTSGTRMPTWXXXXXXXXXXXXXXAIAAKIYAGLRMYGNYRLPKHCDNNEVLKALCNEAGWTVEEDGTTYRKGCKPVEYMDVMGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHYTPHANGSADANSLIPWLKNLXXXXXXXXXKDPHHM-YIHGGSISAPVTPPLS-SPT 554
            MTSGTR PTW              AIAAKI+AGLR++GN++LPKHCDNNEVLKALCNEAGWTVE+DGTTYRKGCKP++ MD+M G                                  +    N   DANSLIPWLKNL           P  + + HG SISAPVTPPL+ SPT
Sbjct:    1 MTSGTRTPTWKERENNKRRERRRRAIAAKIFAGLRIHGNFKLPKHCDNNEVLKALCNEAGWTVEDDGTTYRKGCKPMDRMDLMNG--------STSASPCSSYQHSPRASYNPSPSSSSFPSPTNPFGDANSLIPWLKNL-------SSNSPSKLPFFHGNSISAPVTPPLARSPT 161          
BLAST of CX288295 vs. ExPASy Swiss-Prot
Match: BZR2_ARATH (Protein BRASSINAZOLE-RESISTANT 2 OS=Arabidopsis thaliana GN=BZR2 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.062e-27
Identity = 82/227 (36.12%), Postives = 105/227 (46.26%), Query Frame = 3
Query:    6 ATSFSASVKMTSGTRMPTWXXXXXXXXXXXXXXAIAAKIYAGLRMYGNYRLPKHCDNNEVLKALCNEAGWTVEEDGTTYRKGCKPVEYMDVMGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHY-TPHANGSA-DANSLIPWLKNLXXXXXXXXXKDPHHMYIHGGSISAPVTPPLSSPTCRTPRTKNDWDEPT-------AVAAWAGQHYPFLPSSTPPSP 659
            +TS +A+    +  R P+W              A+AAKIY GLR  GNY LPKHCDNNEVLKALC+EAGW VEEDGTTYRKG KP+   D+ G                                   + +P   G   + +++ P+L+N            P  +     S SAPVTPP+SSPT R P+    W+  T       A  +    +YPF   S P SP
Sbjct:    8 STSAAAAAAAMATRRKPSWRERENNRRRERRRRAVAAKIYTGLRAQGNYNLPKHCDNNEVLKALCSEAGWVVEEDGTTYRKGHKPLP-GDMAGSSSRATPYSSHNQSPLSSTFDSPILSYQVSPSSSSFPSPSRVGDPHNISTIFPFLRN---------GGIPSSLPPLRISNSAPVTPPVSSPTSRNPKPLPTWESFTKQSMSMAAKQSMTSLNYPFYAVSAPASP 224          
BLAST of CX288295 vs. ExPASy Swiss-Prot
Match: BZR1_ARATH (Protein BRASSINAZOLE-RESISTANT 1 OS=Arabidopsis thaliana GN=BZR1 PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 7.917e-27
Identity = 82/230 (35.65%), Postives = 106/230 (46.09%), Query Frame = 3
Query:    6 ATSFSASVKMTSGT---RMPTWXXXXXXXXXXXXXXAIAAKIYAGLRMYGNYRLPKHCDNNEVLKALCNEAGWTVEEDGTTYRKGCKPVEYMDVMGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHYTPHANGSADAN---SLIPWLKNLXXXXXXXXXKDPHHMYIHGGSISAPVTPPLSSPTCRTPRTKNDWD----EPTAVA--AWAGQHYPFLPSSTPPSP 659
            ATS SA+    +     R P+W              A+AAKIY GLR  G+Y LPKHCDNNEVLKALC EAGW VEEDGTTYRKGCKP+   ++ G                                   +   + G  + N   +  P+L+N            P  +     S S PVTPP+SSPT + P+   +W+    +  A+A  + A  +YPF   S P SP
Sbjct:    6 ATSTSAAAAAAAAAAARRKPSWRERENNRRRERRRRAVAAKIYTGLRAQGDYNLPKHCDNNEVLKALCVEAGWVVEEDGTTYRKGCKPLP-GEIAGTSSRVTPYSSQNQSPLSSAFQSPIPSYQVSPSSSSFPSPSRGEPNNNMSSTFFPFLRN---------GGIPSSLPSLRISNSCPVTPPVSSPTSKNPKPLPNWESIAKQSMAIAKQSMASFNYPFYAVSAPASP 225          
BLAST of CX288295 vs. ExPASy Swiss-Prot
Match: BEH2_ARATH (BES1/BZR1 homolog protein 2 OS=Arabidopsis thaliana GN=BEH2 PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 9.678e-25
Identity = 77/213 (36.15%), Postives = 98/213 (46.01%), Query Frame = 3
Query:   36 TSGTRMPTWXXXXXXXXXXXXXXAIAAKIYAGLRMYGNYRLPKHCDNNEVLKALCNEAGWTVEEDGTTYRKGCKPVEYMDVMGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHYTPHA--NGSADANSLIPWLKNLXXXXXXXXXKDPHHMYIHGGSISAPVTPPLSSPTCRTPRTKNDWDEPTAVAAWAGQHYPFLPSSTPPSPGRQ 668
            +S  R PTW              AI AKIY+GLR  GNY+LPKHCDNNEVLKALC EAGW VE+DGTTYRKG KP    D+ G                                   +   +  +G+  +  L+P+L N+           P ++     S SAPVTPPLSSPT R  + K   ++     +     +P    S P SP R+
Sbjct:   12 SSSGRTPTWKERENNKKRERRRRAITAKIYSGLRAQGNYKLPKHCDNNEVLKALCLEAGWIVEDDGTTYRKGFKP-PASDISGTPTNFSTNSSIQPSPQSSAFPSPAPSYHGSPVSSSFPSPSRYDGNPSSYLLLPFLHNIASSI-------PANLPPLRISNSAPVTPPLSSPTSRGSKRKLTSEQLPNGGSLHVLRHPLFAISAPSSPTRR 216          
BLAST of CX288295 vs. ExPASy Swiss-Prot
Match: BEH1_ARATH (BES1/BZR1 homolog protein 1 OS=Arabidopsis thaliana GN=BEH1 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.825e-23
Identity = 75/208 (36.06%), Postives = 91/208 (43.75%), Query Frame = 3
Query:   48 RMPTWXXXXXXXXXXXXXXAIAAKIYAGLRMYGNYRLPKHCDNNEVLKALCNEAGWTVEEDGTTYRKGCKPVEYMDVMGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHYTPHANGSADANSLIPWLKNLXXXXXXXXXKDPHHMYIHGGSISAPVTPPLSSPTCRTPRTKNDWDEPTAVAAWAGQHYPFLPSSTPPSPGRQV 671
            RMPTW              AIAAKI+ GLR  GNY+LPKHCDNNEVLKALC EAGW V EDGTTYRKG +P E                                         + P+ +    +  LIP+L+NL         +          S SAPVTPP+SSP    PR          +  W   ++P    S P SP R++
Sbjct:   14 RMPTWKERENNKKRERRRRAIAAKIFTGLRSQGNYKLPKHCDNNEVLKALCLEAGWIVHEDGTTYRKGSRPTE---TTVPCSSIQLSPQSSAFQSPIPSYQASPSSSSYPSPTRFDPNQS----STYLIPYLQNLASSGNLAPLRI---------SNSAPVTPPISSPRRSNPR----------LPRWQSSNFPV---SAPSSPTRRL 192          
The following BLAST results are available for this feature:
BLAST of CX288295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
BEH4_ARATH5.634e-4949.09BES1/BZR1 homolog protein 4 OS=Arabidopsis thalian... [more]
BEH3_ARATH5.844e-3850.00BES1/BZR1 homolog protein 3 OS=Arabidopsis thalian... [more]
BZR2_ARATH6.062e-2736.12Protein BRASSINAZOLE-RESISTANT 2 OS=Arabidopsis th... [more]
BZR1_ARATH7.917e-2735.65Protein BRASSINAZOLE-RESISTANT 1 OS=Arabidopsis th... [more]
BEH2_ARATH9.678e-2536.15BES1/BZR1 homolog protein 2 OS=Arabidopsis thalian... [more]
BEH1_ARATH1.825e-2336.06BES1/BZR1 homolog protein 1 OS=Arabidopsis thalian... [more]
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Properties
Property NameValue
Genbank descriptionC01018H03SK Veg1 Citrus clementina cDNA clone C01018H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288295 ID=CX288295; Name=CX288295; organism=Citrus clementina; type=EST; length=680bp
AAGAAGCGACGTCGTTTTCAGCTTCAGTGAAAATGACGTCGGGGACGAGA
ATGCCGACGTGGAAGGAGAGGGACAACAACAAGAGACGAGAGCGGCGACG
GAGAGCCATCGCCGCGAAGATCTACGCTGGATTAAGAATGTACGGTAACT
ATAGGCTCCCCAAACACTGCGACAATAACGAGGTGTTAAAAGCTCTCTGT
AATGAGGCTGGCTGGACCGTCGAAGAAGACGGCACCACTTACAGAAAGGG
ATGCAAACCTGTAGAATACATGGATGTCATGGGAGGGTCCGCATCAGCCA
GTGCCTGCTCATCATACCAGCAAAGCCCATGTGCATCCTACAATCCCAGT
CCTGGCTCATCTTCCTTTCCAAGTCCACGGTCTTCTCATTACACACCTCA
TGCTAATGGTAGTGCTGATGCCAATTCACTCATCCCATGGCTCAAAAACC
TTTCATCTAGCTCATCATCAGCTTCATCCAAGGACCCCCACCATATGTAC
ATTCATGGAGGTTCCATAAGTGCTCCAGTCACCCCTCCGCTGAGTTCCCC
AACTTGCCGAACTCCTCGAACAAAAAATGACTGGGATGAACCAACTGCTG
TTGCTGCTTGGGCTGGTCAGCACTATCCTTTCTTGCCTTCTTCCACCCCA
CCAAGTCCTGGCCGTCAGGTCCTGCCTGAT
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