CX288432

Overview
NameCX288432
Unique NameCX288432
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length773
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288432 vs. ExPASy Swiss-Prot
Match: NAS_SOLLC (Nicotianamine synthase OS=Solanum lycopersicum GN=CHLN PE=2 SV=1)

HSP 1 Score: 311.997 bits (798), Expect = 2.310e-84
Identity = 151/228 (66.23%), Postives = 190/228 (83.33%), Query Frame = 1
Query:    1 PIANLNIFPYYSNYIKLSQLEFNILTQHCSRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSAHGARAFLYPVVDPCDLLGFEVLSVFHPTDEVINSVVLARKYVMPSLEQQDQLSPKILPKK--CSKIEAFNPLHHGSMIDELAIEE 678
            P+ +L+IFPY+ NYIKLS LE+NILT++ +  P KIAFIGSGPLPLTS+VLA  HL TTCF NYDID  AN  A +LV++DPD+S+RM FHT D+M+V+ ALKDY+VVFLAALVGMDK++K++V+DHLAKYM+PGA LMLRSAHGARAFLYPV+DP DL GFEVLSV+HPTDEVINSV++ARK  +PS+   D L   +LP K  C++I AFNPL+  ++++E A+EE
Sbjct:   90 PLQHLHIFPYFDNYIKLSLLEYNILTKNTTNIPKKIAFIGSGPLPLTSLVLATKHLKTTCFHNYDIDVDANFMASALVAADPDMSSRMTFHTADVMDVTCALKDYDVVFLAALVGMDKEDKVKVVDHLAKYMSPGATLMLRSAHGARAFLYPVLDPRDLRGFEVLSVYHPTDEVINSVIIARKLPVPSVPLLDGLGAYVLPSKCACAEIHAFNPLNKMNLVEEFALEE 317          
BLAST of CX288432 vs. ExPASy Swiss-Prot
Match: NAS3_ARATH (Nicotianamine synthase 3 OS=Arabidopsis thaliana GN=NAS3 PE=2 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 1.076e-73
Identity = 144/232 (62.07%), Postives = 184/232 (79.31%), Query Frame = 1
Query:    1 PIANLNIFPYYSNYIKLSQLEFNILTQHCSRF-PTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSAHGARAFLYPVVDPCDLLGFEVLSVFHPTDEVINSVVLARKYVMPSLEQQDQLSPKIL-PKKCSKIEAFNPLHHGSMIDEL-AIEEQLS 687
            P+ +LNIFPYY+NY+KL +LEF++L Q+ + F P  +AFIGSGPLPLTSIVLA  HL  T F N+DIDPSANS A  LVSSDPD+S RMFFHT DIM+V+ +LK ++VVFLAALVGM+K+EK++VI+HL K+MAPGA+LMLRSAHG RAFLYP+V+PCDL GFEVLS++HPTD+VINSVV+++K+ + S+      +  +L P  CSK  A   ++   MI+E  A EEQLS
Sbjct:   91 PLHHLNIFPYYNNYLKLGKLEFDLLEQNLNGFVPKSVAFIGSGPLPLTSIVLASFHLKDTIFHNFDIDPSANSLASLLVSSDPDISQRMFFHTVDIMDVTESLKSFDVVFLAALVGMNKEEKVKVIEHLQKHMAPGAVLMLRSAHGPRAFLYPIVEPCDLQGFEVLSIYHPTDDVINSVVISKKHPVVSIGNVGGPNSCLLKPCNCSKTHA--KMNKNMMIEEFGAREEQLS 320          
BLAST of CX288432 vs. ExPASy Swiss-Prot
Match: NAS4_ARATH (Probable nicotianamine synthase 4 OS=Arabidopsis thaliana GN=NAS4 PE=2 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 2.929e-71
Identity = 144/236 (61.02%), Postives = 181/236 (76.69%), Query Frame = 1
Query:    1 PIANLNIFPYYSNYIKLSQLEFNILTQHCSRF-PTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSAHGARAFLYPVVDPCDLLGFEVLSVFHPTDEVINSVVLARKYVMPS----LEQQDQLSPKILPKKCSKIEAFNPLHHGSMIDEL--AIEEQLS 687
            P+ +LN+FPYY+NY+KLS+LEF++L Q+ + F P  +AFIGSGPLPLTS+VLA +HL  + F N+DIDPSAN  A  LVSSDPDLS RMFFHT DIM+V+ +LK ++VVFLAALVGMDK EK++V++HL K+M+PGALLMLRSAHG RAFLYP+V+PCDL GFEVLSV+HPTDEVINS+V++RK    +     +  DQ S   L   CSKI         S+I+E   A EEQL+
Sbjct:   92 PLHHLNLFPYYNNYLKLSKLEFDLLEQNLNGFVPRTVAFIGSGPLPLTSVVLASSHLKDSIFHNFDIDPSANMVAARLVSSDPDLSQRMFFHTVDIMDVTESLKGFDVVFLAALVGMDKKEKVKVVEHLEKHMSPGALLMLRSAHGPRAFLYPIVEPCDLEGFEVLSVYHPTDEVINSIVISRKLGEDANGVVHDHIDQASD--LACNCSKIHVIMN-KKKSIIEEFAGANEEQLT 324          
BLAST of CX288432 vs. ExPASy Swiss-Prot
Match: NAS1_ARATH (Nicotianamine synthase 1 OS=Arabidopsis thaliana GN=NAS1 PE=2 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 2.742e-69
Identity = 132/228 (57.89%), Postives = 169/228 (74.12%), Query Frame = 1
Query:    1 PIANLNIFPYYSNYIKLSQLEFNILTQHCSRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSAHGARAFLYPVVDPCDLLGFEVLSVFHPTDEVINSVVLARKYVMPSLE-QQDQLSPKILPKKCSKIEA-FNPLHHGSMIDELAIEE 678
            P+ +L+IFPYYSNY+KL +LEF++L+QH S  PTKIAF+GSGP+PLTSIVLA  HL  T F N+DID  AN+ A +LVS DPDLS RM FHTTD++N +  L  Y+VVFLAALVGMDK+ K++ I+HL K+MAPGA+LMLRSAH  RAFLYP+VD  DL GF++L+++HPTD+V+NSVV+ARK   P+            +P  CSKI A  N     +MI+E +  E
Sbjct:   93 PLDHLHIFPYYSNYLKLGKLEFDLLSQHSSHVPTKIAFVGSGPMPLTSIVLAKFHLPNTTFHNFDIDSHANTLASNLVSRDPDLSKRMIFHTTDVLNATEGLDQYDVVFLAALVGMDKESKVKAIEHLEKHMAPGAVLMLRSAHALRAFLYPIVDSSDLKGFQLLTIYHPTDDVVNSVVIARKLGGPTTPGVNGTRGCMFMPCNCSKIHAIMNNRGKKNMIEEFSAIE 320          
BLAST of CX288432 vs. ExPASy Swiss-Prot
Match: NAS2_ARATH (Nicotianamine synthase 2 OS=Arabidopsis thaliana GN=NAS2 PE=2 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 3.581e-69
Identity = 125/210 (59.52%), Postives = 164/210 (78.10%), Query Frame = 1
Query:    1 PIANLNIFPYYSNYIKLSQLEFNILTQHCSRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSAHGARAFLYPVVDPCDLLGFEVLSVFHPTDEVINSVVLARKYVMPSLEQQDQLSP-KILPKKCSKIEA 627
            P+ +L+IFPYY+NY+KL +LEF++L+QH +  PTK+AFIGSGP+PLTSIVLA  HL  T F N+DID  AN+ A +LVS D DLS RM FHTTD++N    L  Y+VVFLAALVGMDK+ K++ I+HL K+MAPGA++MLRSAHG RAFLYP+VD CDL GFEVL+++HP+D+V+NSVV+ARK    +  +  Q+    ++P  CSK+ A
Sbjct:   92 PLNHLHIFPYYNNYLKLGKLEFDLLSQHTTHVPTKVAFIGSGPMPLTSIVLAKFHLPNTTFHNFDIDSHANTLASNLVSRDSDLSKRMIFHTTDVLNAKEGLDQYDVVFLAALVGMDKESKVKAIEHLEKHMAPGAVVMLRSAHGLRAFLYPIVDSCDLKGFEVLTIYHPSDDVVNSVVIARKLGGSNGARGSQIGRCVVMPCNCSKVHA 301          
BLAST of CX288432 vs. ExPASy Swiss-Prot
Match: NAS9_HORVU (Nicotianamine synthase 9 OS=Hordeum vulgare GN=NAS9 PE=1 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.560e-56
Identity = 111/204 (54.41%), Postives = 146/204 (71.57%), Query Frame = 1
Query:    1 PIANLNIFPYYSNYIKLSQLEFNILTQHC-SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSAHGARAFLYPVVDPCDLL--GFEVLSVFHPTDEVINSVVLARKYVMPSLEQQDQLSPKILP 603
            P+ +L +FPY++NYIKLSQLE  +L +H     P ++AF+GSGPLPL+S+VLA  HL    FDNYDI   AN +A  LV +D D   RM F T D+ +V++ L+ Y+VVFLAALVGM  +EK R+++HL ++MAPGA L++RSAHGAR FLYPVVDP ++   GFEVL+V HP DEVINSV++ARK   P     D+  P  +P
Sbjct:   99 PLDHLTLFPYFNNYIKLSQLEHGLLARHVPGPAPARVAFLGSGPLPLSSLVLAARHLPDASFDNYDISGEANERASRLVRADADAGARMAFRTADVADVTTELEGYDVVFLAALVGMAAEEKARLVEHLGRHMAPGAALVVRSAHGARGFLYPVVDPEEIRRGGFEVLTVHHPEDEVINSVIIARKAAAPPPVAADRDVPVNMP 302          
BLAST of CX288432 vs. ExPASy Swiss-Prot
Match: NAS3_ORYSJ (Nicotianamine synthase 3 OS=Oryza sativa subsp. japonica GN=NAS3 PE=2 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 3.844e-55
Identity = 117/235 (49.79%), Postives = 162/235 (68.94%), Query Frame = 1
Query:    1 PIANLNIFPYYSNYIKLSQLEFNILTQHCSRFP--TKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSAHGARAFLYPVVDPCDLL--GFEVLSVFHPTDEVINSVVLARK--YVMPSLEQQDQLS---PKILPKKCSKIEAFNPLHHGSMIDELAIEE 678
            P+ +L +FPY++NYI+L+QLE+ +L +H    P  +++AF+GSGPLPL+S+VLA  HL    F NYDI   AN +A  LV +D DLS RM FHT+D+ +V++ L  Y+VVFLAALVGM  +EK R+++HL K+MAPGA L++RSAHGAR FLYPVVDP ++   GF+VL+V HP  EVINSV++ARK     P+LE  D  +     ++ + C + E      H  M D  A+E+
Sbjct:  106 PLDHLALFPYFNNYIQLAQLEYALLARHLPAAPPPSRLAFLGSGPLPLSSLVLAARHLPAASFHNYDICADANRRASRLVRADRDLSARMAFHTSDVAHVTTDLAAYDVVFLAALVGMAAEEKARMVEHLGKHMAPGAALVVRSAHGARGFLYPVVDPEEIRRGGFDVLAVHHPEGEVINSVIIARKPPVAAPALEGGDAHAHGHGAVVSRPCQRCE-MEARAHQKMEDMSAMEK 339          
BLAST of CX288432 vs. ExPASy Swiss-Prot
Match: NAS3_ORYSI (Nicotianamine synthase 3 OS=Oryza sativa subsp. indica GN=NAS3 PE=2 SV=2)

HSP 1 Score: 214.927 bits (546), Expect = 3.844e-55
Identity = 117/235 (49.79%), Postives = 162/235 (68.94%), Query Frame = 1
Query:    1 PIANLNIFPYYSNYIKLSQLEFNILTQHCSRFP--TKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSAHGARAFLYPVVDPCDLL--GFEVLSVFHPTDEVINSVVLARK--YVMPSLEQQDQLS---PKILPKKCSKIEAFNPLHHGSMIDELAIEE 678
            P+ +L +FPY++NYI+L+QLE+ +L +H    P  +++AF+GSGPLPL+S+VLA  HL    F NYDI   AN +A  LV +D DLS RM FHT+D+ +V++ L  Y+VVFLAALVGM  +EK R+++HL K+MAPGA L++RSAHGAR FLYPVVDP ++   GF+VL+V HP  EVINSV++ARK     P+LE  D  +     ++ + C + E      H  M D  A+E+
Sbjct:  106 PLDHLALFPYFNNYIQLAQLEYALLARHLPAAPPPSRLAFLGSGPLPLSSLVLAARHLPAASFHNYDICADANRRASRLVRADRDLSARMAFHTSDVAHVTTDLAAYDVVFLAALVGMAAEEKARMVEHLGKHMAPGAALVVRSAHGARGFLYPVVDPEEIRRGGFDVLAVHHPEGEVINSVIIARKPPVAAPALEGGDAHAHGHGAVVSRPCQRCE-MEARAHQKMEDMSAMEK 339          
BLAST of CX288432 vs. ExPASy Swiss-Prot
Match: NAS3_HORVU (Probable nicotianamine synthase 3 OS=Hordeum vulgare GN=NAS3 PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.615e-53
Identity = 104/186 (55.91%), Postives = 138/186 (74.19%), Query Frame = 1
Query:    1 PIANLNIFPYYSNYIKLSQLEFNILTQHCSRF-PTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSAHGARAFLYPVVDPCDL--LGFEVLSVFHPTDEVINSVVLARK 549
            P+ +L IFPYYSNYI LS+LE+ +L ++  R  P ++AFIGSGPLP +S VLA  HL  T FDNYD+  +AN +A  L  +D D+  RM FHT D+ +++S L  Y+VVFLAALVGM  ++K +VI HL  +MA GA L++RSAHGAR FLYP+VDP D+   GFEVL+V HP D+V+NSV++A+K
Sbjct:   94 PLDHLGIFPYYSNYINLSKLEYELLARYVRRHRPARVAFIGSGPLPFSSFVLAARHLPDTMFDNYDLCGAANDRASKLFRADTDVGARMSFHTADVADLASELAKYDVVFLAALVGMAAEDKAKVIAHLGAHMADGAALVVRSAHGARGFLYPIVDPQDIGRGGFEVLAVCHPDDDVVNSVIIAQK 279          
BLAST of CX288432 vs. ExPASy Swiss-Prot
Match: NAS2_HORVU (Probable nicotianamine synthase 2 OS=Hordeum vulgare GN=NAS2 PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.367e-51
Identity = 100/187 (53.48%), Postives = 136/187 (72.73%), Query Frame = 1
Query:    1 PIANLNIFPYYSNYIKLSQLEFNILTQHC--SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSAHGARAFLYPVVDPCDL--LGFEVLSVFHPTDEVINSVVLARK 549
            P+ +L +FPYY+NYI LS+LE+ +L ++      P ++AFIGSGPLP +S VLA  HL  T FDNYD+  +AN +A  L  +D D+  RM FHT D+ +++  L  Y+VVFLAALVGM  ++K +VI HL  +MA GA L++RSAHGAR FLYP+VDP D+   GFEVL+V HP D+V+NSV++A+K
Sbjct:   93 PLDHLGMFPYYNNYINLSKLEYELLARYVPGGYRPARVAFIGSGPLPFSSFVLAARHLPDTMFDNYDLCGAANDRASKLFRADRDVGARMSFHTADVADLAGELAKYDVVFLAALVGMAAEDKAKVIAHLGAHMADGAALVVRSAHGARGFLYPIVDPQDIGRGGFEVLAVCHPDDDVVNSVIIAQK 279          
The following BLAST results are available for this feature:
BLAST of CX288432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
NAS_SOLLC2.310e-8466.23Nicotianamine synthase OS=Solanum lycopersicum GN=... [more]
NAS3_ARATH1.076e-7362.07Nicotianamine synthase 3 OS=Arabidopsis thaliana G... [more]
NAS4_ARATH2.929e-7161.02Probable nicotianamine synthase 4 OS=Arabidopsis t... [more]
NAS1_ARATH2.742e-6957.89Nicotianamine synthase 1 OS=Arabidopsis thaliana G... [more]
NAS2_ARATH3.581e-6959.52Nicotianamine synthase 2 OS=Arabidopsis thaliana G... [more]
NAS9_HORVU1.560e-5654.41Nicotianamine synthase 9 OS=Hordeum vulgare GN=NAS... [more]
NAS3_ORYSJ3.844e-5549.79Nicotianamine synthase 3 OS=Oryza sativa subsp. ja... [more]
NAS3_ORYSI3.844e-5549.79Nicotianamine synthase 3 OS=Oryza sativa subsp. in... [more]
NAS3_HORVU1.615e-5355.91Probable nicotianamine synthase 3 OS=Hordeum vulga... [more]
NAS2_HORVU3.367e-5153.48Probable nicotianamine synthase 2 OS=Hordeum vulga... [more]

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Properties
Property NameValue
Genbank descriptionC01020D05SK Veg1 Citrus clementina cDNA clone C01020D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288432 ID=CX288432; Name=CX288432; organism=Citrus clementina; type=EST; length=773bp
CCTATTGCCAATCTCAATATTTTCCCTTACTATTCAAACTACATCAAGCT
TAGCCAACTTGAGTTCAACATCCTTACCCAACATTGCTCTCGCTTCCCTA
CCAAAATTGCATTTATTGGGTCCGGCCCTCTTCCTTTGACTTCAATTGTT
TTAGCCATTAATCATCTCACTACTACTTGTTTCGACAACTATGATATTGA
CCCTTCGGCCAATTCCAAGGCTCTTAGCTTGGTTTCATCTGACCCTGATT
TGTCAACACGAATGTTCTTTCACACTACTGATATAATGAATGTTTCATCA
GCGCTTAAAGACTATGAAGTCGTTTTCTTGGCAGCGCTGGTAGGGATGGA
CAAGGATGAAAAGATTCGAGTCATCGATCATTTGGCTAAGTACATGGCTC
CCGGTGCTCTTCTAATGCTGAGGAGTGCTCATGGAGCTCGTGCCTTCCTT
TATCCGGTTGTTGATCCTTGTGATCTTCTCGGGTTCGAGGTTTTATCTGT
CTTTCATCCTACTGATGAAGTGATCAATTCAGTGGTACTTGCGCGTAAGT
ACGTAATGCCATCACTCGAGCAACAAGATCAGCTTAGCCCTAAAATTCTG
CCTAAGAAATGTTCCAAGATTGAAGCCTTCAATCCCCTTCACCATGGAAG
CATGATTGATGAATTGGCCATTGAGGAGCAGCTCTCATGAATTTCTTCGC
GTTCCGATCATGAATTGGATCCCTATATGCTCTTCTGGCGTGTGATCACG
TATGTCTACATCTTATATACATC
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