CX288465

Overview
NameCX288465
Unique NameCX288465
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288465 vs. ExPASy Swiss-Prot
Match: A115_TOBAC (Auxin-induced protein PCNT115 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 395.586 bits (1015), Expect = 1.393e-109
Identity = 195/223 (87.44%), Postives = 206/223 (92.38%), Query Frame = 1
Query:   19 VKRIKLGSQGLEVSAQGLGCMGMSAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTNEILLGKALKGGMRERVELATKFGI-----SYADGKREIRGDPAYARAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEAEIVPTCRELGIGIVAYSPLGRGFFSSGPKVVK 672
            V RIKLGSQGLEVSAQGLGCMGMSAFYGPPKPE DMI LIHHAINSGITLLDTSD+YGPHTNEILLGKALKGG RERV LATKFGI       A+GKR + GDPAY RAACEASLKRLDIDCIDLYYQHR+DTRVPIE+T+GELKKLVEEGK+KYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVE EI+PTCRELGIGIVAYSPLGRGF SSGPK+++
Sbjct:    8 VPRIKLGSQGLEVSAQGLGCMGMSAFYGPPKPEPDMIQLIHHAINSGITLLDTSDVYGPHTNEILLGKALKGGTRERVVLATKFGIVLGDEKKAEGKRAVHGDPAYVRAACEASLKRLDIDCIDLYYQHRVDTRVPIEITVGELKKLVEEGKLKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEEEIIPTCRELGIGIVAYSPLGRGFLSSGPKLLE 230          
BLAST of CX288465 vs. ExPASy Swiss-Prot
Match: IN22_MAIZE (IN2-2 protein OS=Zea mays GN=IN2-2 PE=2 SV=1)

HSP 1 Score: 394.43 bits (1012), Expect = 3.104e-109
Identity = 188/224 (83.93%), Postives = 207/224 (92.41%), Query Frame = 1
Query:   16 AVKRIKLGSQGLEVSAQGLGCMGMSAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTNEILLGKALKGGMRERVELATKFGISYADGKREIRGDPAYARAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEAEIVPTCRELGIGIVAYSPLGRGFFSSGPKVVKAFQRK 687
            +V RIKLGSQGLEVSAQGLGCMGMSAFYGPPKPES+MI LIHHA+++G+T LDTSD+YGPHTNE+LLGKAL+GG+RE+VELATKFG+S+ADGKREI GDPAY R ACE S KRL +DCIDLYYQHRID RVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRD E +I+PTCRELGIGIVAYSPLGRGFFSSG K+V +   +
Sbjct:    7 SVPRIKLGSQGLEVSAQGLGCMGMSAFYGPPKPESEMIKLIHHAVDAGVTFLDTSDVYGPHTNEVLLGKALQGGVREKVELATKFGVSFADGKREIHGDPAYVRTACEGSFKRLGVDCIDLYYQHRIDKRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDAEEDIIPTCRELGIGIVAYSPLGRGFFSSGAKLVDSLSEQ 230          
BLAST of CX288465 vs. ExPASy Swiss-Prot
Match: YAKC_SCHPO (Aldo-keto reductase yakc [NADP+] OS=Schizosaccharomyces pombe GN=yakc PE=1 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.421e-45
Identity = 102/209 (48.80%), Postives = 133/209 (63.64%), Query Frame = 1
Query:   55 VSAQGLGCMGMSAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTNEILLGKALKG-GMRERVELATKFGISY--ADGKREIRGDPAYARAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEAE---IVPTCRELGIGIVAYSPLGRGFFSSGPK 663
            V A G GCMG+ A YGP   E++  A++ HA + G T  D+SD+YG   NE  +G+  K  G R+ + LATKFG       G+  +  +P Y   A + SLKRL IDCIDLYY HR     PIE  +G LKK VE GKI+YIGLSE SA+TIRRA AV+P++AVQ+E+S +S ++E     ++  CRE  I IV Y+PLGRGF +   K
Sbjct:   13 VPAIGFGCMGLHAMYGPSSEEANQ-AVLTHAADLGCTFWDSSDMYGFGANEECIGRWFKQTGRRKEIFLATKFGYEKNPETGELSLNNEPDYIEKALDLSLKRLGIDCIDLYYVHRFSGETPIEKIMGALKKCVEAGKIRYIGLSECSANTIRRAAAVYPVSAVQVEYSPFSLEIERPEIGVMKACRENNITIVCYAPLGRGFLTGAYK 220          
BLAST of CX288465 vs. ExPASy Swiss-Prot
Match: PLR1_SCHPO (Pyridoxal reductase OS=Schizosaccharomyces pombe GN=plr1 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.131e-25
Identity = 79/218 (36.24%), Postives = 120/218 (55.05%), Query Frame = 1
Query:   46 GLEVSAQGLGCMGMSAFYGPPK--PESDMIALIHHAINSGITLLDTSDIYG---PHTNEILLGKALKGGMRE--RVELATKFGISYADGKREIRGDPAYARAACEASLKRL-DIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEAE-IVPTCRELGIGIVAYSPLGRGFFSSGPKVVK 672
            G +V   G G MG++     PK  P+ +   ++++A++ G    D  + YG   P +N  LL +  +       +V L+ K G+ +     +  G+P +   + E  +  L     +DL+   R+D  VPIE T+  LK  V+ GKI  +GLSE SA TI+RAHAV PI AV++E+SL+SRD+E   I+  CR+L I I+AYSP  RG  +   K V+
Sbjct:    6 GFKVGPIGFGLMGLT---WKPKQTPDEEAFEVMNYALSQGSNYWDAGEFYGVDPPTSNLDLLARYFEKYPENANKVFLSVKGGLDFKTLVPD--GNPDFVSKSVENVIAHLRGTKKLDLFQCARVDPNVPIETTMKTLKGFVDSGKISCVGLSEVSAETIKRAHAVVPIAAVEVEYSLFSRDIETNGIMDICRKLSIPIIAYSPFCRGLLTGRIKTVE 218          
BLAST of CX288465 vs. ExPASy Swiss-Prot
Match: YCCK_BACSU (Uncharacterized oxidoreductase yccK OS=Bacillus subtilis GN=yccK PE=3 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.381e-24
Identity = 64/174 (36.78%), Postives = 95/174 (54.60%), Query Frame = 1
Query:  133 LIHHAINSGITLLDTSDIYGPHTNEILLGKALKG-GMRERVELATKFGISYADGKREIRGDPAYARAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEAEIVPTCRELGIGIVAYSPLGRGFFS 651
            L+  A++ G+  +DT+ IYG   +E L+G+ ++  G+R  + +ATK      DG  E+     + R+  E SLKRL  D IDLYY H  D + P+    G LK+L +EGKIK IG S      ++  +A   +   Q E+SL  RD E E++P C + GI  + Y PL  G  +
Sbjct:   41 LVRTALDGGVNFIDTAFIYGLGRSEELIGEVVQERGVRNELIIATKGAHKEVDGSIELDNSREFLRSEVEKSLKRLKTDYIDLYYVHFPDGKTPLAEVAGTLKELKDEGKIKAIGASNLDYQQLQDFNADGYLEVFQAEYSLIQRDAEKELLPYCEKQGISFIPYFPLASGLLT 214          
BLAST of CX288465 vs. ExPASy Swiss-Prot
Match: GS69_BACSU (General stress protein 69 OS=Bacillus subtilis GN=yhdN PE=1 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 6.855e-24
Identity = 71/207 (34.30%), Postives = 108/207 (52.17%), Query Frame = 1
Query:   34 LGSQGLEVSAQGLGCMGMSAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTNEILLGKALKG-GMRERVELATKFGISYADGKREIRGDPAYARAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEAEIVPTCRELGIGIVAYSPLGRGFFS 651
            +   G+E S  GLG   +         E   I  I  A++ GITL+DT+  YG   +E ++GKA+K  G R++V LATK  + + + +     + A      E SLKRL  D IDLY  H  D  VPIE T   +K+L + GKI+ IG+S  S   +    AV P+  +Q  ++L+ R++E  ++P  ++  I  + Y  L RG  +
Sbjct:    6 IADTGIEASRIGLGTWAIGGTMWGGTDEKTSIETIRAALDQGITLIDTAPAYGFGQSEEIVGKAIKEYGKRDQVILATKTALDWKNNQLFRHANRARIVEEVENSLKRLQTDYIDLYQVHWPDPLVPIEETAEVMKELYDAGKIRAIGVSNFSIEQMDTFRAVAPLHTIQPPYNLFEREMEESVLPYAKDNKITTLLYGSLCRGLLT 212          
BLAST of CX288465 vs. ExPASy Swiss-Prot
Match: YQKF_BACSU (Uncharacterized oxidoreductase yqkF OS=Bacillus subtilis GN=yqkF PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.579e-23
Identity = 71/216 (32.87%), Postives = 113/216 (52.31%), Query Frame = 1
Query:   19 VKRIKLGSQGLEVSAQGLGCMGMSAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTNEILLGKALKGGMRERVELATKFGISYADGKREIRGDP--AYARAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEAEIVPTCRELGIGIVAYSPLGRGFFSSGP 660
            +++ KLG+  L++S  GLGCM +         ++  ++++  AI  GI  LDT+D+Y    NE ++G A++   R  + LATK G  + DG      DP  AY + A + SL RL  D IDLY  H       I+ TI   ++L +EG I+Y G+S    + I+       I ++ +++SL+ R  E E +P   E  I +VA  P+ +G  +  P
Sbjct:    1 MRKRKLGTSDLDISEVGLGCMSLGT------EKNKALSILDEAIELGINYLDTADLYDRGRNEEIVGDAIQN-RRHDIILATKAGNRWDDGSEGWYWDPSKAYIKEAVKKSLTRLKTDYIDLYQLHGGTIEDNIDETIEAFEELKQEGVIRYYGISSIRPNVIKEYVKKSNIVSIMMQFSLFDRRPE-EWLPLLEEHQISVVARGPVAKGLLTEKP 208          
BLAST of CX288465 vs. ExPASy Swiss-Prot
Match: YRPG_BACSU (Uncharacterized oxidoreductase yrpG OS=Bacillus subtilis GN=yrpG PE=3 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 1.688e-22
Identity = 82/230 (35.65%), Postives = 114/230 (49.57%), Query Frame = 1
Query:   34 LGSQGLEVSAQGLGCMGMSAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTN----EILLGK--ALKGGMRERVELATKFGISYAD---GKREIRGDPAYA-RAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHA------VHPITAVQLEWSLWSRDVEAEIVPTCRELGIGIVAYSPLGRGFFSSGPKVVKA 675
            LG  GL VS   LG M     +G    E     ++  A+++GI   DT++IYG   N    E ++GK  A  G  RE+V LATK     +D   G  ++RG   Y  R   E SLKRL  D I+LY  H ID R P +      +  V  GK+ YIG S  +   + +A A         +   Q ++SL  R  E E++P  R+LG+G+VA+SPL  G    G K +K+
Sbjct:    6 LGRTGLRVSRLCLGTMN----FGVDTDEKTAFRIMDEALDNGIQFFDTANIYGWGKNAGLTESIIGKWFAQGGQRREKVVLATKVYEPISDPNDGPNDMRGLSLYKIRRHLEGSLKRLQTDHIELYQMHHIDRRTPWDEIWEAFETQVRSGKVDYIGSSNFAGWHLVKAQAEAEKRRFMGLVTEQHKYSLLERTAEMEVLPAARDLGLGVVAWSPLAGGLL--GGKALKS 229          
BLAST of CX288465 vs. ExPASy Swiss-Prot
Match: IOLS_BACSU (Protein iolS OS=Bacillus subtilis GN=iolS PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.880e-22
Identity = 69/213 (32.39%), Postives = 108/213 (50.70%), Query Frame = 1
Query:   19 VKRIKLGSQGLEVSAQGLG--CMGMSAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTNEILLGKALKGGMRERVELATKFGISYADGKREIRGDPAYARAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEAEIVPTCRELGIGIVAYSPLGRGFFS 651
            +K+ KLG   L+V   GLG   +G    Y P   E     L+  AI +G+T+LDT+ IYG   +E L+G+ L+   RE V +ATK               P + + + + SLKRL+ D IDL+Y H  D   P +  +  L ++ + GKI+ IG+S  S   ++ A+    +  +Q E++L +R+ E    P  +E  I  + Y PL  G  +
Sbjct:    1 MKKAKLGKSDLQVFPIGLGTNAVGGHNLY-PNLNEETGKELVREAIRNGVTMLDTAYIYGIGRSEELIGEVLREFNREDVVIATKAAHRKQGNDFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFPDEHTPKDEAVNALNEMKKAGKIRSIGVSNFSLEQLKEANKDGLVDVLQGEYNLLNREAEKTFFPYTKEHNISFIPYFPLVSGLLA 212          
BLAST of CX288465 vs. ExPASy Swiss-Prot
Match: PLR2_SCHPO (Probable pyridoxal reductase 2 OS=Schizosaccharomyces pombe GN=SPCC1281.04 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.416e-22
Identity = 75/217 (34.56%), Postives = 117/217 (53.92%), Query Frame = 1
Query:   46 GLEVSAQGLGCMGMSAFYGPPK-PESDMIALIHHAINSGITLLDTSDIYG---PHTNEILLGKALKGGMR--ERVELATKFGISYADGKREIRGDPAYARAACEASLKRL-DIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEAE-IVPTCRELGIGIVAYSPLGRGFFSSGPKVVK 672
            G +V   GLG MG++  + P + P      L+++A++ G    +  + YG   P  N  LL    +   +  ++V L+ K G  +        GDP     + + +L RL     +DL+   R+D +VPIE T+  LK  V+ G+I  +GLSEASA +I+RA A+ PI AV+ E+SL+SRD+E   I+ TC +L I I+AY+P   G  +   K  +
Sbjct:    6 GFKVGPIGLGLMGLT--WRPKQTPIKQAFELMNYALSQGSNYWNAGEFYGINPPTANLDLLADYFEKYPKNADKVFLSVKGGTDFKT--LAPHGDPESVTKSVKNALTRLRGKKKLDLFQCARVDHKVPIETTMKALKAFVDSGEISCVGLSEASAESIKRALAIVPIAAVETEYSLFSRDIEKNGILDTCTQLSIPIIAYAPFCHGLLTGRVKTAE 218          
The following BLAST results are available for this feature:
BLAST of CX288465 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
A115_TOBAC1.393e-10987.44Auxin-induced protein PCNT115 OS=Nicotiana tabacum... [more]
IN22_MAIZE3.104e-10983.93IN2-2 protein OS=Zea mays GN=IN2-2 PE=2 SV=1[more]
YAKC_SCHPO2.421e-4548.80Aldo-keto reductase yakc [NADP+] OS=Schizosaccharo... [more]
PLR1_SCHPO2.131e-2536.24Pyridoxal reductase OS=Schizosaccharomyces pombe G... [more]
YCCK_BACSU1.381e-2436.78Uncharacterized oxidoreductase yccK OS=Bacillus su... [more]
GS69_BACSU6.855e-2434.30General stress protein 69 OS=Bacillus subtilis GN=... [more]
YQKF_BACSU7.579e-2332.87Uncharacterized oxidoreductase yqkF OS=Bacillus su... [more]
YRPG_BACSU1.688e-2235.65Uncharacterized oxidoreductase yrpG OS=Bacillus su... [more]
IOLS_BACSU2.880e-2232.39Protein iolS OS=Bacillus subtilis GN=iolS PE=1 SV=... [more]
PLR2_SCHPO6.416e-2234.56Probable pyridoxal reductase 2 OS=Schizosaccharomy... [more]

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Properties
Property NameValue
Genbank descriptionC01020G02SK Veg1 Citrus clementina cDNA clone C01020G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288465 ID=CX288465; Name=CX288465; organism=Citrus clementina; type=EST; length=715bp
GAGGAAATGGCGGGGGCAGTGAAGAGAATCAAGCTTGGTTCACAAGGTCT
AGAGGTTTCAGCACAAGGCTTAGGATGCATGGGCATGTCCGCCTTCTACG
GGCCCCCGAAGCCAGAATCCGACATGATCGCCTTGATCCACCATGCCATT
AACAGTGGCATCACTCTACTTGACACCTCCGATATTTACGGGCCCCACAC
CAATGAAATCCTTCTGGGAAAGGCTTTGAAGGGAGGAATGAGGGAAAGAG
TTGAATTGGCTACTAAATTTGGTATCAGCTATGCGGATGGTAAAAGGGAA
ATTCGCGGTGACCCGGCTTATGCGAGAGCTGCATGTGAGGCCAGCTTGAA
GCGTCTGGATATTGATTGTATTGATCTTTATTACCAACATCGCATTGATA
CACGAGTTCCCATTGAAGTCACGATTGGAGAACTCAAGAAACTAGTTGAA
GAGGGTAAGATAAAGTATATAGGTCTGTCCGAGGCTTCTGCCTCAACAAT
TAGACGAGCTCATGCTGTCCATCCAATAACAGCTGTGCAGTTGGAATGGT
CCTTGTGGTCACGAGATGTGGAGGCAGAGATTGTTCCTACTTGCAGGGAA
CTTGGCATTGGAATTGTTGCATACAGTCCTCTAGGACGAGGATTTTTTTC
CTCAGGGCCTAAAGTGGTGAAAGCTTTTCAAAGGAAGATTTAGACAGTAT
CTACCGAGGTCCAAG
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