CX288519
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288519 vs. ExPASy Swiss-Prot
Match: SRCAP_HUMAN (Helicase SRCAP OS=Homo sapiens GN=SRCAP PE=1 SV=2) HSP 1 Score: 140.584 bits (353), Expect = 1.921e-34 Identity = 70/114 (61.40%), Postives = 85/114 (74.56%), Query Frame = 2 Query: 44 GHRVLIFSQWTSMLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRSFKHPTL 385 GHRVLIF+Q T MLD+LE L G Y RLDGST+V +RQA+++ FN D IF +LSTR+GG G+NLTGADTVV +D D+NP +D QA+DRCHRIGQTR V IYR T+ Sbjct: 2059 GHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALMERFNADKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRLISERTV 2172 HSP 2 Score: 26.1794 bits (56), Expect = 1.921e-34 Identity = 11/30 (36.67%), Postives = 20/30 (66.67%), Query Frame = 1 Query: 475 RLVTKGTVDENVYEIAKRKLILDAAVLESG 564 RL+++ TV+EN+ + A +K +L +E G Sbjct: 2165 RLISERTVEENILKKANQKRMLGDMAIEGG 2194
BLAST of CX288519 vs. ExPASy Swiss-Prot
Match: SWR1_EMENI (Helicase swr1 OS=Emericella nidulans GN=swr1 PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 7.683e-34 Identity = 67/115 (58.26%), Postives = 87/115 (75.65%), Query Frame = 2 Query: 41 GGHRVLIFSQWTSMLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRSFKHPTL 385 GGHR LIF+Q T MLD+LE L++ G Y RLDG+T+V +RQ + D FNND I A +LS+R+GG G+NLTGADTV+ +D+D+NP +D+Q +DRCHRIGQTR V IYR T+ Sbjct: 1346 GGHRALIFTQMTKMLDVLEQFLNIHGHRYLRLDGTTKVEQRQILTDRFNNDNRILAFILSSRSGGLGINLTGADTVIFYDLDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSEYTI 1460
BLAST of CX288519 vs. ExPASy Swiss-Prot
Match: SWR1_ASPFU (Helicase swr1 OS=Aspergillus fumigatus GN=swr1 PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.712e-33 Identity = 67/115 (58.26%), Postives = 86/115 (74.78%), Query Frame = 2 Query: 41 GGHRVLIFSQWTSMLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRSFKHPTL 385 GGHR LIF+Q T MLDILE L++ G Y RLDG+T+V +RQ + D FNND I +LS+R+GG G+NLTGADTV+ +D+D+NP +D+Q +DRCHRIGQTR V IYR T+ Sbjct: 1393 GGHRALIFTQMTKMLDILEQFLNIHGHRYLRLDGTTKVEQRQILTDRFNNDDRILVFILSSRSGGLGINLTGADTVIFYDLDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSEHTI 1507
BLAST of CX288519 vs. ExPASy Swiss-Prot
Match: SWR1_GIBZE (Helicase SWR1 OS=Gibberella zeae GN=SWR1 PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 2.920e-33 Identity = 67/115 (58.26%), Postives = 85/115 (73.91%), Query Frame = 2 Query: 41 GGHRVLIFSQWTSMLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRSFKHPTL 385 GGHR LIF+Q T +LDILE L++ G Y RLDG+T+V +RQ + D FNND I +LSTR+GG G+NLTGADTV+ +D D+NP +D+Q +DRCHRIGQTR V IYR T+ Sbjct: 1386 GGHRALIFTQMTKVLDILEQFLNIHGHKYLRLDGATKVEQRQILTDRFNNDPRILCFILSTRSGGLGINLTGADTVIFYDQDWNPAMDKQCQDRCHRIGQTRDVHIYRLVSEHTI 1500
BLAST of CX288519 vs. ExPASy Swiss-Prot
Match: DOM_DROME (Helicase domino OS=Drosophila melanogaster GN=dom PE=1 SV=2) HSP 1 Score: 140.198 bits (352), Expect = 8.494e-33 Identity = 68/114 (59.65%), Postives = 85/114 (74.56%), Query Frame = 2 Query: 44 GHRVLIFSQWTSMLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRSFKHPTL 385 GHRVLIF+Q T MLD+LE L+ G Y RLDGST+V +RQ +++ FN D IF +LSTR+GG G+NLTGADTV+ +D D+NP +D QA+DRCHRIGQTR V IYR T+ Sbjct: 1674 GHRVLIFTQMTKMLDVLEAFLNYHGHIYLRLDGSTRVEQRQILMERFNGDKRIFCFILSTRSGGVGINLTGADTVIFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRLVSERTI 1787
BLAST of CX288519 vs. ExPASy Swiss-Prot
Match: SWR1_NEUCR (Helicase swr-1 OS=Neurospora crassa GN=swr-1 PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.109e-32 Identity = 66/115 (57.39%), Postives = 85/115 (73.91%), Query Frame = 2 Query: 41 GGHRVLIFSQWTSMLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRSFKHPTL 385 GGHR LIF+Q T +LDILE L++ G Y RLDG+T+V +RQ + D FN+D I +LSTR+GG G+NLTGADTV+ +D D+NP +D+Q +DRCHRIGQTR V IYR T+ Sbjct: 1521 GGHRALIFTQMTKVLDILEQFLNIHGHKYLRLDGATKVEQRQILTDRFNHDPRILCFILSTRSGGLGINLTGADTVIFYDQDWNPAMDKQCQDRCHRIGQTRDVHIYRLVSEHTI 1635
BLAST of CX288519 vs. ExPASy Swiss-Prot
Match: SWR1_YARLI (Helicase SWR1 OS=Yarrowia lipolytica GN=SWR1 PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 4.216e-32 Identity = 63/115 (54.78%), Postives = 85/115 (73.91%), Query Frame = 2 Query: 41 GGHRVLIFSQWTSMLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRSFKHPTL 385 GGHR LIF+Q T +LD+LE L++ G+ Y RLDG+T++ +RQ + + FN D I +LSTR+GG G+NLTGADTV+ +D D+NP +D+Q +DRCHRIGQTR V IYR T+ Sbjct: 1484 GGHRALIFTQMTKVLDVLEQFLNIHGLRYMRLDGATKIEQRQLLTERFNTDPKIPVFILSTRSGGLGINLTGADTVIFYDSDWNPSMDKQCQDRCHRIGQTRDVHIYRFVSEHTI 1598
BLAST of CX288519 vs. ExPASy Swiss-Prot
Match: SWR1_USTMA (Helicase SWR1 OS=Ustilago maydis GN=SWR1 PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 4.958e-32 Identity = 65/115 (56.52%), Postives = 82/115 (71.30%), Query Frame = 2 Query: 41 GGHRVLIFSQWTSMLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRSFKHPTL 385 GGHR+LIF+Q T +LDILE L+ G Y RLDG+T+V RQA+ + FN D I A +LSTR+GG G+NLTGADTV+ +D+D+N I+ Q DR HRIGQTR V IYR T+ Sbjct: 1548 GGHRILIFTQMTRVLDILESFLNYHGYRYLRLDGATKVESRQALTEQFNRDARISAFILSTRSGGLGINLTGADTVLFYDLDWNAAIEAQCMDRAHRIGQTRDVHIYRFVTEHTI 1662 HSP 2 Score: 28.8758 bits (63), Expect = 4.958e-32 Identity = 12/30 (40.00%), Postives = 20/30 (66.67%), Query Frame = 1 Query: 475 RLVTKGTVDENVYEIAKRKLILDAAVLESG 564 R VT+ T++EN+ A +K +LD V++ G Sbjct: 1655 RFVTEHTIEENMLRKANQKRLLDNVVIQQG 1684
BLAST of CX288519 vs. ExPASy Swiss-Prot
Match: SWR1_SCHPO (Helicase swr1 OS=Schizosaccharomyces pombe GN=swr1 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.227e-31 Identity = 66/114 (57.89%), Postives = 85/114 (74.56%), Query Frame = 2 Query: 44 GHRVLIFSQWTSMLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYRSFKHPTL 385 GHRVLIF+Q T +LDILE L++ G Y RLDG+T++ +RQ + + FNND I +LSTR+GG G+NLTGADTV+ +D D+NPQ+D QA+DR HRIGQTR V IYR T+ Sbjct: 1007 GHRVLIFTQMTKVLDILEQFLNIHGHRYLRLDGATKIEQRQILTERFNNDDKIPVFILSTRSGGLGINLTGADTVIFYDSDWNPQLDAQAQDRSHRIGQTRDVHIYRLISEYTV 1120
BLAST of CX288519 vs. ExPASy Swiss-Prot
Match: SWR1_CRYNE (Helicase SWR1 OS=Cryptococcus neoformans GN=SWR1 PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.432e-31 Identity = 63/107 (58.88%), Postives = 79/107 (73.83%), Query Frame = 2 Query: 44 GHRVLIFSQWTSMLDILEWTLDVIGVTYRRLDGSTQVTERQAIVDAFNNDTSIFACLLSTRAGGQGLNLTGADTVVIHDMDFNPQIDRQAEDRCHRIGQTRPVTIYR 364 GHRVLIF+Q T +LDILE L G Y RLDGST++ +RQ + + FN+D+ IF + S+R+GG G+NLTGADTV +D D+NP +DRQ DR HRIGQTR V IYR Sbjct: 954 GHRVLIFTQMTRVLDILEMFLSHNGHRYLRLDGSTKIEDRQVLTERFNSDSRIFVFIASSRSGGVGINLTGADTVFFYDSDWNPSMDRQCMDRAHRIGQTREVHIYR 1060 HSP 2 Score: 27.7202 bits (60), Expect = 1.432e-31 Identity = 12/30 (40.00%), Postives = 20/30 (66.67%), Query Frame = 1 Query: 475 RLVTKGTVDENVYEIAKRKLILDAAVLESG 564 R V+ TV+EN+ A++K +LD V++ G Sbjct: 1060 RFVSSHTVEENMLRKAEQKRLLDKMVIQEG 1089 The following BLAST results are available for this feature:
BLAST of CX288519 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 185
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288519 ID=CX288519; Name=CX288519; organism=Citrus clementina; type=EST; length=635bpback to top |