CX288551
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288551 vs. ExPASy Swiss-Prot
Match: RER1A_ARATH (Protein RER1A OS=Arabidopsis thaliana GN=RER1A PE=2 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 5.843e-45 Identity = 86/134 (64.18%), Postives = 98/134 (73.13%), Query Frame = 1 Query: 244 MEGIGGDTASAASPVSQWGHDAWRLYQYYLDKTTPHAVYRWIGTLVILAIYCLRVFYVQXXXXXXXXXXXXXXXXXXXXXXPLVDPEI-EVADGPLLPTKGSDEFKPFIRRLPEFKFWYSMTKAFCIAFVMTFF 642 M+ GGD+ S A+PV Q H+AWR+YQ+YLDKTTPHA YRWIGTLV+ IYCLRV+Y+Q PLVDPE V+DGP LPT+GSDEFKPFIRRLPEFKFWYSMTKAFCIAF+MTFF Sbjct: 1 MDESGGDSGSVATPVQQRAHEAWRIYQHYLDKTTPHANYRWIGTLVVALIYCLRVYYIQGFYIIAYGLGIYLLNLLIGFLSPLVDPEAGGVSDGPSLPTRGSDEFKPFIRRLPEFKFWYSMTKAFCIAFLMTFF 134
BLAST of CX288551 vs. ExPASy Swiss-Prot
Match: RER1B_ARATH (Protein RER1B OS=Arabidopsis thaliana GN=RER1B PE=2 SV=2) HSP 1 Score: 179.489 bits (454), Expect = 1.302e-44 Identity = 84/133 (63.16%), Postives = 96/133 (72.18%), Query Frame = 1 Query: 244 MEGIGGDTASAASPVSQWGHDAWRLYQYYLDKTTPHAVYRWIGTLVILAIYCLRVFYVQXXXXXXXXXXXXXXXXXXXXXXPLVDPEIEVADGPLLPTKGSDEFKPFIRRLPEFKFWYSMTKAFCIAFVMTFF 642 MEG GGD+ S A+PV + H+AWR+YQYYLDKTTPH+ RWIGTLV IYCLRV+ + PLVDPE+EV+DG LPT+GSDEFKPFIRRLPEFKFWYSMTKAFCIAF+MTFF Sbjct: 1 MEGSGGDSGSMATPVQKKVHEAWRVYQYYLDKTTPHSTNRWIGTLVFFLIYCLRVYSIHGFYIISYGLGIYLLNLLIGFLSPLVDPELEVSDGATLPTRGSDEFKPFIRRLPEFKFWYSMTKAFCIAFLMTFF 133
BLAST of CX288551 vs. ExPASy Swiss-Prot
Match: RER1C_ARATH (Protein RER1C OS=Arabidopsis thaliana GN=RER1C PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.267e-23 Identity = 53/127 (41.73%), Postives = 74/127 (58.27%), Query Frame = 1 Query: 262 DTASAASPVSQWGHDAWRLYQYYLDKTTPHAVYRWIGTLVILAIYCLRVFYVQXXXXXXXXXXXXXXXXXXXXXXPLVDPEIEVADGPLLPTKGSDEFKPFIRRLPEFKFWYSMTKAFCIAFVMTFF 642 D++S A V++ H + Q+ LDKT PH +YRWI L ++ IY +RV++V+ P DPE + G LPT+ SDE++PF+RRLPEFKFW S+ +AF I F+MTFF Sbjct: 29 DSSSPADAVNRLIHAFSQRQQHLLDKTVPHVLYRWIACLCVVLIYIVRVYFVEGFYIITYAIGIYLLNLIIAFLSPQEDPEASLTSGGSLPTRRSDEYRPFVRRLPEFKFWLSIIRAFIIGFMMTFF 155
BLAST of CX288551 vs. ExPASy Swiss-Prot
Match: RER1_BOVIN (Protein RER1 OS=Bos taurus GN=RER1 PE=2 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 7.685e-21 Identity = 52/134 (38.81%), Postives = 73/134 (54.48%), Query Frame = 1 Query: 247 EGIGGDTASAASPVSQWGHDAWRLYQYYLDKTTPHAVYRWIGTLVILAIYCLRVFYVQXXXXXXXXXXXXXXXXXXXXXXPLVDPEI--EVADGPLLPTKGSDEFKPFIRRLPEFKFWYSMTKAFCIAFVMTFF 642 + +G S V ++ ++YQ +LDK+TPH RW+ TL + IY +RV+ +Q P VDP + + DGP LPTK ++EF+PFIRRLPEFKFW++ TK +A V TFF Sbjct: 5 DSVGDSVHGKPSVVYRFFTRLGQIYQSWLDKSTPHTAVRWVVTLGLSFIYMIRVYLLQGWYIVTYALGIYHLNLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHAATKGILVAMVCTFF 138
BLAST of CX288551 vs. ExPASy Swiss-Prot
Match: RER1_CAEEL (Protein RER1 homolog OS=Caenorhabditis elegans GN=rer-1 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.311e-20 Identity = 49/121 (40.50%), Postives = 66/121 (54.55%), Query Frame = 1 Query: 289 SQWGHDAWRLYQYYLDKTTPHAVYRWIGTLVILAIYCLRVFYVQXXXXXXXXXXXXXXXXXXXXXXPLVDPEIEVAD---GPLLPTKGSDEFKPFIRRLPEFKFWYSMTKAFCIAFVMTFF 642 S++ H YQYYLD+ TPH +RW+ L+ L + R+ +Q P +DP +E D GP+LP+K +DEF+PF+RRLPEFKFW+S KA IA TFF Sbjct: 13 SRFFHSLEVKYQYYLDRLTPHTAFRWVIALISLVFFASRIILLQGFYIVAYAVGIYYLNLFLLFLTPSIDPALEFEDEDDGPVLPSKTNDEFRPFMRRLPEFKFWHSFMKATLIAITCTFF 133
BLAST of CX288551 vs. ExPASy Swiss-Prot
Match: RER1_RAT (Protein RER1 OS=Rattus norvegicus GN=Rer1 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 4.981e-20 Identity = 49/134 (36.57%), Postives = 73/134 (54.48%), Query Frame = 1 Query: 247 EGIGGDTASAASPVSQWGHDAWRLYQYYLDKTTPHAVYRWIGTLVILAIYCLRVFYVQXXXXXXXXXXXXXXXXXXXXXXPLVDPEI--EVADGPLLPTKGSDEFKPFIRRLPEFKFWYSMTKAFCIAFVMTFF 642 + +G S V ++ ++YQ +LDK+TP+ RW+ TL + +Y +RV+ +Q P VDP + + DGP LPTK ++EF+PFIRRLPEFKFW++ TK +A + TFF Sbjct: 5 DSVGDSVHGKPSVVYRFFSRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYLLQGWYIVTYALGIYHLNLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHAATKGILVAMICTFF 138
BLAST of CX288551 vs. ExPASy Swiss-Prot
Match: RER1_MOUSE (Protein RER1 OS=Mus musculus GN=Rer1 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 4.981e-20 Identity = 49/134 (36.57%), Postives = 73/134 (54.48%), Query Frame = 1 Query: 247 EGIGGDTASAASPVSQWGHDAWRLYQYYLDKTTPHAVYRWIGTLVILAIYCLRVFYVQXXXXXXXXXXXXXXXXXXXXXXPLVDPEI--EVADGPLLPTKGSDEFKPFIRRLPEFKFWYSMTKAFCIAFVMTFF 642 + +G S V ++ ++YQ +LDK+TP+ RW+ TL + +Y +RV+ +Q P VDP + + DGP LPTK ++EF+PFIRRLPEFKFW++ TK +A + TFF Sbjct: 5 DSVGDSVHGKPSVVYRFFSRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYLLQGWYIVTYALGIYHLNLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHAATKGILVAMICTFF 138
BLAST of CX288551 vs. ExPASy Swiss-Prot
Match: RER1_PONAB (Protein RER1 OS=Pongo abelii GN=RER1 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.506e-20 Identity = 50/134 (37.31%), Postives = 73/134 (54.48%), Query Frame = 1 Query: 247 EGIGGDTASAASPVSQWGHDAWRLYQYYLDKTTPHAVYRWIGTLVILAIYCLRVFYVQXXXXXXXXXXXXXXXXXXXXXXPLVDPEI--EVADGPLLPTKGSDEFKPFIRRLPEFKFWYSMTKAFCIAFVMTFF 642 + +G S V ++ ++YQ +LDK+TP+ RW+ TL + +Y +RV+ +Q P VDP + + DGP LPTK ++EF+PFIRRLPEFKFW++ TK +A V TFF Sbjct: 5 DSVGESVHGKPSVVYRFFTRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYLLQGWYIVTYALGIYHLNLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHAATKGILVAMVCTFF 138
BLAST of CX288551 vs. ExPASy Swiss-Prot
Match: RER1_HUMAN (Protein RER1 OS=Homo sapiens GN=RER1 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.506e-20 Identity = 50/134 (37.31%), Postives = 73/134 (54.48%), Query Frame = 1 Query: 247 EGIGGDTASAASPVSQWGHDAWRLYQYYLDKTTPHAVYRWIGTLVILAIYCLRVFYVQXXXXXXXXXXXXXXXXXXXXXXPLVDPEI--EVADGPLLPTKGSDEFKPFIRRLPEFKFWYSMTKAFCIAFVMTFF 642 + +G S V ++ ++YQ +LDK+TP+ RW+ TL + +Y +RV+ +Q P VDP + + DGP LPTK ++EF+PFIRRLPEFKFW++ TK +A V TFF Sbjct: 5 DSVGESVHGKPSVVYRFFTRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYLLQGWYIVTYALGIYHLNLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHAATKGILVAMVCTFF 138
BLAST of CX288551 vs. ExPASy Swiss-Prot
Match: RER1_CHICK (Protein RER1 OS=Gallus gallus GN=RER1 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 8.497e-20 Identity = 52/134 (38.81%), Postives = 72/134 (53.73%), Query Frame = 1 Query: 247 EGIGGDTASAASPVSQWGHDAWRLYQYYLDKTTPHAVYRWIGTLVILAIYCLRVFYVQXXXXXXXXXXXXXXXXXXXXXXPLVDPEI--EVADGPLLPTKGSDEFKPFIRRLPEFKFWYSMTKAFCIAFVMTFF 642 + IG S V ++ ++YQ +LDK+TP+ RWI TL + IY +RV+ +Q P VDP + + DGP LPT+ ++EF+PFIRRLPEFKFW+S TK +A TFF Sbjct: 5 DSIGESVHGKPSVVYRFFTRLGQIYQSWLDKSTPYTAVRWIVTLGLSFIYMIRVYLLQGWYIVTYALGIYHLNLFIAFLSPKVDPSLMEDSDDGPSLPTRQNEEFRPFIRRLPEFKFWHSATKGILVAMACTFF 138 The following BLAST results are available for this feature:
BLAST of CX288551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288551 ID=CX288551; Name=CX288551; organism=Citrus clementina; type=EST; length=643bpback to top |