CX288557
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288557 vs. ExPASy Swiss-Prot
Match: HEM6_ARATH (Coproporphyrinogen-III oxidase, chloroplastic OS=Arabidopsis thaliana GN=CPX PE=1 SV=1) HSP 1 Score: 375.941 bits (964), Expect = 8.583e-104 Identity = 170/202 (84.16%), Postives = 177/202 (87.62%), Query Frame = 3 Query: 6 VVYGVMPPEXXXXXXXXXSDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRYVEFNLVYDRGTTFGLK 611 VVYGVMPPE SD+KPGP+PFFAAG+SSVLHPKNPFAPTLHFNYRYFETDAPKD PGAPRQWWFGGGTD TPAYIFEEDVKHFHS QK ACDKFDP+FYPRFKKWCDDYFYIKH FFDDLNDYDQEMLLSFATECANSV+PAYIPI+EKRKD FT+QHKAWQQLRRGRYVEFNLVYDRGTTFGLK Sbjct: 141 VVYGVMPPEAYRAAKGSASDQKPGPVPFFAAGVSSVLHPKNPFAPTLHFNYRYFETDAPKDVPGAPRQWWFGGGTDFTPAYIFEEDVKHFHSIQKQACDKFDPSFYPRFKKWCDDYFYIKHRDERRGLGGIFFDDLNDYDQEMLLSFATECANSVVPAYIPIVEKRKDMEFTEQHKAWQQLRRGRYVEFNLVYDRGTTFGLK 342
BLAST of CX288557 vs. ExPASy Swiss-Prot
Match: HEM6_SOYBN (Coproporphyrinogen-III oxidase, chloroplastic OS=Glycine max GN=CPX PE=2 SV=1) HSP 1 Score: 373.244 bits (957), Expect = 5.563e-103 Identity = 170/202 (84.16%), Postives = 176/202 (87.13%), Query Frame = 3 Query: 6 VVYGVMPPEXXXXXXXXXSDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRYVEFNLVYDRGTTFGLK 611 VVYGVMPP+ +D+KPGP+PFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKD PGAPRQWWFGGGTDLTPAYIFEEDVKHFHS QK ACDKF+PTFYPRFKKWCDDYFYIKH FFDDLNDYDQEMLLSFATECANSVIPAY+PIIEKRKD PF D KAWQQLRRGRYVEFNLVYDRGTTFGLK Sbjct: 140 VVYGVMPPDAYRAAKGVPTDQKPGPVPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDAPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSIQKQACDKFEPTFYPRFKKWCDDYFYIKHRGERRGLGGIFFDDLNDYDQEMLLSFATECANSVIPAYLPIIEKRKDLPFNDHQKAWQQLRRGRYVEFNLVYDRGTTFGLK 341
BLAST of CX288557 vs. ExPASy Swiss-Prot
Match: HEM6_TOBAC (Coproporphyrinogen-III oxidase, chloroplastic OS=Nicotiana tabacum GN=CPX PE=2 SV=1) HSP 1 Score: 364.385 bits (934), Expect = 2.584e-100 Identity = 168/203 (82.76%), Postives = 175/203 (86.21%), Query Frame = 3 Query: 6 VVYGVMPPEXXXXXXXXXSDE-KPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRYVEFNLVYDRGTTFGLK 611 VVYGVMPPE + KPGPIPFFAAG+SSVLHPKNPFAPTLHFNYRYFETDAPKD PGAPRQWWFGGGTD TPAYIFEEDVKHFHS QK+ACDKFD +FYPRFKKWC DYFYIKH FFDD NDYDQEMLLSF+TECANSVIPAYIPI+EKRKDTPFTD+HKAWQQLRRGRYVEFNLVYDRGTTFGLK Sbjct: 151 VVYGVMPPEAYRAARPTDNGNVKPGPIPFFAAGVSSVLHPKNPFAPTLHFNYRYFETDAPKDAPGAPRQWWFGGGTDFTPAYIFEEDVKHFHSVQKAACDKFDASFYPRFKKWCVDYFYIKHRDERRGLGGIFFDDFNDYDQEMLLSFSTECANSVIPAYIPIVEKRKDTPFTDKHKAWQQLRRGRYVEFNLVYDRGTTFGLK 353
BLAST of CX288557 vs. ExPASy Swiss-Prot
Match: HEM6_ORYSJ (Coproporphyrinogen-III oxidase, chloroplastic OS=Oryza sativa subsp. japonica GN=CPX PE=2 SV=2) HSP 1 Score: 358.992 bits (920), Expect = 1.086e-98 Identity = 165/209 (78.95%), Postives = 175/209 (83.73%), Query Frame = 3 Query: 6 VVYGVMPPEXXXXXXXXXSDE-------KPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRYVEFNLVYDRGTTFGLK 611 VVYGVMPP+ K GP+PFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKD PGAPRQWWFGGGTDLTP+YI EEDVKHFHS QK ACDKFDP+FYPRFKKWCDDYFYIKH FFDDLNDYDQEMLL+FATECA+SV+PAYIPIIE+RKDTPFT++HKAWQQLRRGRYVEFNLVYDRGTTFGLK Sbjct: 145 VVYGVMPPDAYRAAKGEAGKNGAAADGPKAGPVPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDAPGAPRQWWFGGGTDLTPSYIIEEDVKHFHSVQKQACDKFDPSFYPRFKKWCDDYFYIKHRNERRGLGGIFFDDLNDYDQEMLLNFATECADSVVPAYIPIIERRKDTPFTEEHKAWQQLRRGRYVEFNLVYDRGTTFGLK 353
BLAST of CX288557 vs. ExPASy Swiss-Prot
Match: HEM6_HORVU (Coproporphyrinogen-III oxidase, chloroplastic OS=Hordeum vulgare GN=CPX PE=2 SV=1) HSP 1 Score: 339.347 bits (869), Expect = 8.903e-93 Identity = 150/181 (82.87%), Postives = 161/181 (88.95%), Query Frame = 3 Query: 69 KPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRYVEFNLVYDRGTTFGLK 611 K GP+PFF+AGISSVLHPKNPFAPTLHFNYRYFETDAPKD PGAPR WWFGGGTDLTP+Y+ EEDVKHFHS QK CDKFDP+FYPRFKKWCDDYFYIKH FFDDLNDYDQ+MLL+FATECA SVIPAYIPIIE+RKDTPF ++ KAWQQ+RRGRYVEFNLVYDRGTTFGLK Sbjct: 167 KAGPVPFFSAGISSVLHPKNPFAPTLHFNYRYFETDAPKDVPGAPRSWWFGGGTDLTPSYLIEEDVKHFHSVQKQTCDKFDPSFYPRFKKWCDDYFYIKHRNERRGLGGIFFDDLNDYDQDMLLNFATECAGSVIPAYIPIIERRKDTPFNEEQKAWQQVRRGRYVEFNLVYDRGTTFGLK 347
BLAST of CX288557 vs. ExPASy Swiss-Prot
Match: HEM6_DROME (Coproporphyrinogen-III oxidase OS=Drosophila melanogaster GN=Coprox PE=1 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 8.683e-64 Identity = 108/202 (53.47%), Postives = 138/202 (68.32%), Query Frame = 3 Query: 6 VVYGVMPPEXXXXXXXXXSDEKPGP-IPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRYVEFNLVYDRGTTFGL 608 VV G +PP + K G +PFFA+G+S+V+HP+NP PT+HFNYRYFE + K +QWWFGGGTDLTP Y+ E+D HFH T KSACD+ DPT+YPRFKKWCDDYF IKH FFDD++ +QE +F + CA +VIP+Y+P++ K K+ + + + WQ LRRGRYVEFNL+YDRGT FGL Sbjct: 147 VVTGSLPPAAVQQMRARGKNLKEGASLPFFASGVSAVIHPRNPHVPTIHFNYRYFEVETAK----GEKQWWFGGGTDLTPYYLCEKDASHFHQTLKSACDEHDPTYYPRFKKWCDDYFRIKHRNESRGIGGIFFDDIDSPNQEAAFNFVSSCARAVIPSYVPLVRKHKNREYGNNERQWQLLRRGRYVEFNLIYDRGTKFGL 344
BLAST of CX288557 vs. ExPASy Swiss-Prot
Match: HEM6_HUMAN (Coproporphyrinogen-III oxidase, mitochondrial OS=Homo sapiens GN=CPOX PE=1 SV=3) HSP 1 Score: 232.646 bits (592), Expect = 1.174e-60 Identity = 103/180 (57.22%), Postives = 124/180 (68.89%), Query Frame = 3 Query: 69 KPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRYVEFNLVYDRGTTFGL 608 K G +PF A G+SSV+HPKNP APT+HFNYRYFE + +QWWFGGG DLTP Y+ +ED HFH T K ACD+ P YP+FKKWCDDYF+I H FFDDL+ +E + F CA +V+P+YIP+++K D FT Q K WQQLRRGRYVEFNL+YDRGT FGL Sbjct: 232 KDGKLPFCAMGVSSVIHPKNPHAPTIHFNYRYFEVEEADGN----KQWWFGGGCDLTPTYLNQEDAVHFHRTLKEACDQHGPDLYPKFKKWCDDYFFIAHRGERRGIGGIFFDDLDSPSKEEVFRFVQSCARAVVPSYIPLVKKHCDDSFTPQEKLWQQLRRGRYVEFNLLYDRGTKFGL 407
BLAST of CX288557 vs. ExPASy Swiss-Prot
Match: HEM6_RAT (Coproporphyrinogen-III oxidase, mitochondrial OS=Rattus norvegicus GN=Cpox PE=2 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 7.607e-60 Identity = 103/181 (56.91%), Postives = 122/181 (67.40%), Query Frame = 3 Query: 66 EKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRYVEFNLVYDRGTTFGL 608 +K G +PF A GISSV+HPKNP+APT+HFNYRYFE + WWFGGG DLTP Y+ ED HFH T K ACD+ P YP+FKKWCDDYF+I H FFDDL+ +E F CA +V+P+Y+PI++K D +T Q K WQQLRRGRYVEFNLVYDRGT FGL Sbjct: 220 KKDGKLPFTAMGISSVIHPKNPYAPTMHFNYRYFEVEEAD----GKMHWWFGGGCDLTPTYLNREDAVHFHRTLKEACDQHGPDIYPKFKKWCDDYFFIAHRGERRGIGGIFFDDLDSPSKEEAFRFVKTCAEAVVPSYVPIVKKHCDDSYTPQDKLWQQLRRGRYVEFNLVYDRGTKFGL 396
BLAST of CX288557 vs. ExPASy Swiss-Prot
Match: HEM6_SCHPO (Probable coproporphyrinogen-III oxidase OS=Schizosaccharomyces pombe GN=hem13 PE=2 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 2.447e-58 Identity = 101/183 (55.19%), Postives = 126/183 (68.85%), Query Frame = 3 Query: 63 DEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRYVEFNLVYDRGTTFGLK 611 D +PFFAAGIS V+HP+NP APT H NYRYFE + WWFGGG DLTP+ +FEED KHFH K ACD+ DPTFYPRFKKW D+YF IKH FFDDL++ D + L +F +CA++ +PAY+PI+EKRK+ FT+ K +Q +RRG Y EFN++YDRGT FGL+ Sbjct: 90 DRTAKELPFFAAGISMVIHPRNPMAPTTHLNYRYFELV----NSDGKKIWWFGGGADLTPSILFEEDGKHFHKLHKEACDRHDPTFYPRFKKWADEYFLIKHRKETRGIGGIFFDDLSEKDPQELFAFVKDCAHTFLPAYVPIMEKRKNMEFTEDDKEFQLIRRGYYAEFNVMYDRGTWFGLQ 268
BLAST of CX288557 vs. ExPASy Swiss-Prot
Match: HEM6_MOUSE (Coproporphyrinogen-III oxidase, mitochondrial OS=Mus musculus GN=Cpox PE=1 SV=2) HSP 1 Score: 224.557 bits (571), Expect = 3.196e-58 Identity = 99/180 (55.00%), Postives = 121/180 (67.22%), Query Frame = 3 Query: 69 KPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRYVEFNLVYDRGTTFGL 608 K +PF A G+SSV+HPKNP+APT+HFNYRYFE + WWFGGG DLTP Y+ +ED HFH T K ACD+ P YP+FKKWCDDYF+I H FFDDL+ +E F CA +V+P+Y+PI++K D +T + K WQQLRRGRYVEFNL+YDRGT FGL Sbjct: 221 KDSKLPFTAMGVSSVIHPKNPYAPTMHFNYRYFEVEEADGNT----HWWFGGGCDLTPTYLNQEDAVHFHRTLKEACDQHGPDIYPKFKKWCDDYFFIVHRGERRGIGGIFFDDLDSPSKEEAFRFVKTCAEAVVPSYVPIVKKHCDDSYTPRDKLWQQLRRGRYVEFNLLYDRGTKFGL 396 The following BLAST results are available for this feature:
BLAST of CX288557 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 239
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288557 ID=CX288557; Name=CX288557; organism=Citrus clementina; type=EST; length=612bpback to top |