CX288593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288593 vs. ExPASy Swiss-Prot
Match: U566_XENLA (UPF0566 protein OS=Xenopus laevis PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.679e-22 Identity = 64/149 (42.95%), Postives = 88/149 (59.06%), Query Frame = 2 Query: 2 LLARLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF--KAQDRCFFHPLSNDMSISLNTNDLDKFLK 439 LLA L +L I EHP V TVE +V ++GG SKNLFLKDKK + ++VS L D +V++ L+++L LG G LR A E +MLE LKV G TP AL + DV +LD F +R +FHP++N ++ + + FLK Sbjct: 9 LLAYLHELDIRPVCAEHPEVFTVEEMMPHVQHLGGAHSKNLFLKDKKKKGLWLVSVLHDRQVNLNDLAKKLNLGSGNLRFADEASMLEKLKVGQGCATPLALFCDRG-DVQFVLDAQFLEGGYERVYFHPMTNAATLGMTPQEFVTFLK 156
BLAST of CX288593 vs. ExPASy Swiss-Prot
Match: U566_BOVIN (UPF0566 protein OS=Bos taurus PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.421e-21 Identity = 58/147 (39.46%), Postives = 87/147 (59.18%), Query Frame = 2 Query: 11 RLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF--KAQDRCFFHPLSNDMSISLNTNDLDKFLKS 442 RL L I EHP V TVE ++ ++ G SKNLFLKDKK + +++V+ L D ++++ L+++LG+G G LR A E MLE LKV G TP AL + DV +LD F ++ +FHP++N ++ L+ D F+K+ Sbjct: 13 RLAALAIRTEVVEHPEVFTVEEMMPHIQHLKGAHSKNLFLKDKKKKGYWLVTVLHDRQINLNDLAKQLGVGSGNLRFADEAAMLEKLKVGQGCATPLALFCDDG-DVKFVLDSAFLEGGHEKVYFHPMTNAATMGLSPEDFLTFVKN 158
BLAST of CX288593 vs. ExPASy Swiss-Prot
Match: U566_HUMAN (UPF0566 protein OS=Homo sapiens PE=3 SV=3) HSP 1 Score: 101.293 bits (251), Expect = 1.856e-21 Identity = 58/146 (39.73%), Postives = 86/146 (58.90%), Query Frame = 2 Query: 11 RLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF--KAQDRCFFHPLSNDMSISLNTNDLDKFLK 439 RL L I EHP V TVE ++ ++ G SKNLFLKDKK + +++V+ L D ++++ L+++LG+G G LR A E MLE LKV G TP AL + DV +LD F ++ +FHP++N ++ L+ D F+K Sbjct: 13 RLGALAIHTEVVEHPEVFTVEEMMPHIQHLKGAHSKNLFLKDKKKKNYWLVTVLHDRQINLNELAKQLGVGSGNLRFADETAMLEKLKVGQGCATPLALFCDGG-DVKFVLDSAFLEGGHEKVYFHPMTNAATMGLSPEDFLTFVK 157
BLAST of CX288593 vs. ExPASy Swiss-Prot
Match: U566_MOUSE (UPF0566 protein OS=Mus musculus PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.203e-20 Identity = 56/147 (38.10%), Postives = 86/147 (58.50%), Query Frame = 2 Query: 11 RLKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHR-FYIVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDKGF--KAQDRCFFHPLSNDMSISLNTNDLDKFLKS 442 RL L I EHP V T+E ++ ++ G SKNLFLKDKK + +++V+ L D ++++ L ++LG+G G LR A E MLE LKV G TP +L + DV +LD F ++ +FHP++N ++ L+ D F+K+ Sbjct: 13 RLGALAIRTEVVEHPEVFTIEEMMPHIQHLKGAHSKNLFLKDKKKKNYWLVTVLHDRQINLNDLGKQLGVGSGNLRFADETAMLEKLKVGQGCATPLSLFCDDG-DVKFVLDSAFLEGGHEKVYFHPMTNAATMGLSPEDFLIFVKA 158
BLAST of CX288593 vs. ExPASy Swiss-Prot
Match: U566_DANRE (UPF0566 protein OS=Danio rerio GN=zgc:64201 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 6.602e-19 Identity = 58/146 (39.73%), Postives = 83/146 (56.85%), Query Frame = 2 Query: 14 LKDLQIEFSQYEHPAVMTVEAQAKYVGNIGGGLSKNLFLKDKKHRFYIVSALADTKVDMKVLSQRLGLGKGGLRMAPEETMLEILKVPLGSVTPFALVNESARDVALLLDK----GFKAQDRCFFHPLSNDMSISLNTNDLDKFLK 439 LK L IE + EHP V TVE +V ++ G ++KNLFLKDKK R ++V D + + LS+R LG LR+A E +LE L+V G VTP AL ++ R V +LD+ G C HP++N ++ + DL +FL+ Sbjct: 31 LKRLNIETTCIEHPEVFTVEEMMPHVSHLSGVVTKNLFLKDKKRRVFLVCVRHDRPLALGELSRR--LGAPNLRLAEERLLLEKLRVRQGCVTPLALFLDTERSVTAVLDRELTHGGHTHIHC--HPMTNSATMGITPADLLRFLE 172 The following BLAST results are available for this feature:
BLAST of CX288593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288593 ID=CX288593; Name=CX288593; organism=Citrus clementina; type=EST; length=442bpback to top |