CX288607

Overview
NameCX288607
Unique NameCX288607
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length491
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288607 vs. ExPASy Swiss-Prot
Match: SCP29_ARATH (Serine carboxypeptidase-like 29 OS=Arabidopsis thaliana GN=SCPL29 PE=2 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 3.525e-60
Identity = 105/162 (64.81%), Postives = 129/162 (79.63%), Query Frame = 2
Query:    5 KLETLTQYSIFTPSCTASVSQSNRLLKRMHVVGHASEKYDPCTEKHSVVYFNQPEVQKALHVIPAVAPAKWETCIGVVNNNWLDSPMTVLDIYHELIHSGLRIWMFSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDKGHVGGWTQEYAGLTFVTVRGAG 490
            ++  + QYS+FTP+C A+ SQSN LLK+  +    SE+YDPCTEKH+ VYFN PEVQKALHV P +AP+KW+TC  VV+ +W DSP +VL+IYHELI +GLRIW+FSGD DAV+PVTSTRYSIDALNL  +  +  WY  G VGGW+Q+YAGL FVTVRGAG
Sbjct:  276 EIGNIDQYSVFTPACVANASQSNMLLKKRPMTSRVSEQYDPCTEKHTTVYFNLPEVQKALHVPPGLAPSKWDTCSDVVSEHWNDSPSSVLNIYHELIAAGLRIWVFSGDADAVVPVTSTRYSIDALNLRPLSAYGPWYLDGQVGGWSQQYAGLNFVTVRGAG 437          
BLAST of CX288607 vs. ExPASy Swiss-Prot
Match: CBP22_HORVU (Serine carboxypeptidase II-2 (Fragment) OS=Hordeum vulgare GN=CXP;2-2 PE=1 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 4.604e-60
Identity = 110/160 (68.75%), Postives = 124/160 (77.50%), Query Frame = 2
Query:   17 LTQYSIFTPSCTASVSQS-NRLLKRMHVVGHASEKYDPCTEKHSVVYFNQPEVQKALHVIPAVAPAKWETCIGVVNNNWLDSPMTVLDIYHELIHSGLRIWMFSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWY-DKGHVGGWTQEYAGLTFVTVRGAG 490
            +  YSIFTP+C +S + S N+++KR+  VG   E+YDPCTEKHS+VYFN  EVQKALHV P +  +KWETC  V+N NW D   +VL IYHELI  GLRIWMFSGDTDAVIPVTSTRYSIDAL LPTV PW AWY D G VGGWTQ Y GL FVTVRGAG
Sbjct:  243 IDSYSIFTPTCHSSFASSRNKVVKRLRSVGKMGEQYDPCTEKHSIVYFNLHEVQKALHVNPVIGKSKWETCSEVINTNWKDCERSVLHIYHELIQYGLRIWMFSGDTDAVIPVTSTRYSIDALKLPTVTPWHAWYDDDGEVGGWTQGYKGLNFVTVRGAG 402          
BLAST of CX288607 vs. ExPASy Swiss-Prot
Match: SCP23_ARATH (Putative serine carboxypeptidase-like 23 OS=Arabidopsis thaliana GN=SCPL23 PE=2 SV=2)

HSP 1 Score: 176.407 bits (446), Expect = 6.041e-44
Identity = 81/155 (52.26%), Postives = 106/155 (68.39%), Query Frame = 2
Query:   26 YSIFTPSCTASVSQSNRLLKRMHVVGHASEKYDPCTEKHSVVYFNQPEVQKALHVIPAVAPAKWETCIGVVNNNWLDSPMTVLDIYHELIHSGLRIWMFSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDKGHVGGWTQEYAGLTFVTVRGAG 490
            YSI++PSC    +Q+  L  R+ V  +   +YDPCTE ++ +Y+N+P+VQ+A+H      P KW  C  VVNNNW DS  ++L IY EL  +GLRIW+FSGDTDAV+PVT TR ++  LNLP   PW  WY +  VGGWT+ Y GLTF T+RGAG
Sbjct:  275 YSIYSPSCVHQTNQTKFLHGRLLVEEY---EYDPCTESYAEIYYNRPDVQRAMHANLTSIPYKWTLCNMVVNNNWKDSEFSMLPIYKELTAAGLRIWVFSGDTDAVVPVTGTRLALSKLNLPVKTPWYPWYSEKQVGGWTEVYEGLTFATIRGAG 426          
BLAST of CX288607 vs. ExPASy Swiss-Prot
Match: SCP25_ARATH (Serine carboxypeptidase-like 25 OS=Arabidopsis thaliana GN=SCPL25 PE=2 SV=2)

HSP 1 Score: 172.94 bits (437), Expect = 6.679e-43
Identity = 83/169 (49.11%), Postives = 106/169 (62.72%), Query Frame = 2
Query:   17 LTQYSIFTPSCTASVS-----------QSNRLLKRMHVVGHASEKYDPCTEKHSVVYFNQPEVQKALHVIPAVAPAKWETCIGVVNNNWLDSPMTVLDIYHELIHSGLRIWMFSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDKGHVGGWTQEYAGLTFVTVRGAG 490
            + QY+I+ P C  S             +S RL    H V      YDPCTE+++ +Y+N+P+VQKALH      P KW  C  V+N NW D+  TVL IY E+I  G+R+W+FSGD D+V+PVT+TRYS+  L+L T  PW  WY K  VGGWT+ Y GLTFVTVRGAG
Sbjct:  278 IDQYNIYAPPCNKSSDGGGSYNGSSGRRSMRLPHLPHSVLRKISGYDPCTERYAEIYYNRPDVQKALHANTTKIPYKWTACSEVLNRNWNDTDSTVLPIYREMIAGGIRVWVFSGDVDSVVPVTATRYSLARLSLSTKLPWYPWYVKKQVGGWTEVYEGLTFVTVRGAG 446          
BLAST of CX288607 vs. ExPASy Swiss-Prot
Match: SCP27_ARATH (Serine carboxypeptidase-like 27 OS=Arabidopsis thaliana GN=SCPL27 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 8.723e-43
Identity = 83/155 (53.55%), Postives = 106/155 (68.39%), Query Frame = 2
Query:   26 YSIFTPSCTASVSQSNRLLKRMHVVGHASEKYDPCTEKHSVVYFNQPEVQKALHVIPAVAPAKWETCIGVVNNNWLDSPMTVLDIYHELIHSGLRIWMFSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDKGHVGGWTQEYAGLTFVTVRGAG 490
            YSIFT  C ++V+    L  R   +  A   YDPCTE++S VYFN+ +VQKALH         W+ C  +V + W DSP+++L IY ELI +GL+IW+FSGDTDAV+P+T+TRYS+DAL L T+  W  WYD G VGGW+Q Y GLT VTV GAG
Sbjct:  281 YSIFTKPCNSTVALKRFLKGRYPWMSRA---YDPCTERYSNVYFNRLDVQKALHANVTRLSYPWKACSDIVGSYWDDSPLSMLPIYKELITAGLKIWVFSGDTDAVVPITATRYSVDALKLATITNWYPWYDHGKVGGWSQVYKGLTLVTVAGAG 432          
BLAST of CX288607 vs. ExPASy Swiss-Prot
Match: CBP21_HORVU (Serine carboxypeptidase II-1 (Fragment) OS=Hordeum vulgare GN=CXP;2-1 PE=1 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 7.385e-42
Identity = 80/155 (51.61%), Postives = 102/155 (65.81%), Query Frame = 2
Query:   26 YSIFTPSCTASVSQSNRLLKRMHVVGHASEKYDPCTEKHSVVYFNQPEVQKALHVIPAVAPAKWETCIGVVNNNWLDSPMTVLDIYHELIHSGLRIWMFSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDKGHVGGWTQEYAGLTFVTVRGAG 490
            YSI+TP+C  +     RL+K           YDPCTE++S  Y+N PEVQKA        P  W  C  V++++W DSP ++L IY ELI +G+RIW+FSGD D+V+P+T+TRYSIDAL LPTV  W  WYD+  V GW Q Y GLT VT+RGAG
Sbjct:  138 YSIYTPTCKKTSLHRRRLIKGRRP--WLPRGYDPCTEQYSTKYYNLPEVQKAFRANVTGIPYSWTACSDVLSDHWKDSPRSMLPIYRELIAAGIRIWVFSGDADSVVPLTATRYSIDALYLPTVTNWYPWYDEEEVAGWCQVYKGLTLVTIRGAG 290          
BLAST of CX288607 vs. ExPASy Swiss-Prot
Match: SCP24_ARATH (Serine carboxypeptidase 24 OS=Arabidopsis thaliana GN=SCPL24 PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 2.149e-41
Identity = 84/168 (50.00%), Postives = 104/168 (61.90%), Query Frame = 2
Query:   17 LTQYSIFTPSCTAS----------VSQSNRLLKRMHVVGHASEKYDPCTEKHSVVYFNQPEVQKALHVIPAVAPAKWETCIGVVNNNWLDSPMTVLDIYHELIHSGLRIWMFSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDKGHVGGWTQEYAGLTFVTVRGAG 490
            + QYSI+TP+C A+          V   N LL+R  V G     YDPCTE ++  YFN+P+VQ+A+H        KW  C  V+   W DS  T+L IY EL  SGLRIW+FSGDTD+V+PVT+TR+S+  LNLP    W  WY    VGGWT+ Y GLTF TVRGAG
Sbjct:  275 IDQYSIYTPTCVAAQQKKNTTGFFVRMKNTLLRRRLVSG-----YDPCTESYAEKYFNRPDVQRAMHANVTGIRYKWTACSDVLIKTWKDSDKTMLPIYKELAASGLRIWIFSGDTDSVVPVTATRFSLSHLNLPVKTRWYPWYTDNQVGGWTEVYKGLTFATVRGAG 437          
BLAST of CX288607 vs. ExPASy Swiss-Prot
Match: CBP2_WHEAT (Serine carboxypeptidase 2 OS=Triticum aestivum GN=CBP2 PE=1 SV=2)

HSP 1 Score: 166.392 bits (420), Expect = 6.252e-41
Identity = 81/165 (49.09%), Postives = 108/165 (65.45%), Query Frame = 2
Query:   17 LTQYSIFTPSC---TASVSQSNRLLKRMHVVGH---ASEKYDPCTEKHSVVYFNQPEVQKALHV-IPAVAPAKWETCIGVVNNNWLDSPMTVLDIYHELIHSGLRIWMFSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDKGHVGGWTQEYAGLTFVTVRGAG 490
            +  YS++TP C   ++S S S+ L ++    G     +  YDPCTE++S  Y+N+ +VQ ALH  +       W TC   +N +W D+P ++L IY ELI +GLRIW+FSGDTDAV+P+T+TRYSI AL LPT   W  WYD   VGGW+Q Y GLT V+VRGAG
Sbjct:  248 IDMYSLYTPVCNITSSSSSSSSSLSQQRRSRGRYPWLTGSYDPCTERYSTAYYNRRDVQMALHANVTGAMNYTWATCSDTINTHWHDAPRSMLPIYRELIAAGLRIWVFSGDTDAVVPLTATRYSIGALGLPTTTSWYPWYDDQEVGGWSQVYKGLTLVSVRGAG 412          
BLAST of CX288607 vs. ExPASy Swiss-Prot
Match: SCP22_ARATH (Serine carboxypeptidase-like 22 OS=Arabidopsis thaliana GN=SCPL22 PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 1.393e-40
Identity = 83/165 (50.30%), Postives = 106/165 (64.24%), Query Frame = 2
Query:   17 LTQYSIFTPSCTASVSQSNRL----LKRMHVVGHASE-KYDPCTEKHSVVYFNQPEVQKALHVIPAVAPAKWETCIGVVNNNW--LDSPMTVLDIYHELIHSGLRIWMFSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDKGHVGGWTQEYAGLTFVTVRGAG 490
            + QYSI+TP C     Q+N+     + +MH      E +YDPCTE ++ +Y+N+PEVQ+A+H      P KW  C   V NNW   DS  ++L IY ELI +GLRIW++SGDTD+VIPVT+TRYS+  LNL     W  WY    VGG T+ Y GLTFVTVRGAG
Sbjct:  272 IDQYSIYTPKCVPPQDQTNQTKFEQMMQMHTTKRFLEDQYDPCTENYAEIYYNRPEVQRAMHANHTAIPYKWTACSDSVFNNWNWRDSDNSMLPIYKELIAAGLRIWVYSGDTDSVIPVTATRYSLGKLNLRVKTRWYPWYSGNQVGGRTEVYEGLTFVTVRGAG 436          
BLAST of CX288607 vs. ExPASy Swiss-Prot
Match: SCP26_ARATH (Serine carboxypeptidase-like 26 OS=Arabidopsis thaliana GN=SCPL26 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 6.912e-40
Identity = 80/157 (50.96%), Postives = 100/157 (63.69%), Query Frame = 2
Query:   26 YSIFTPSCTASVSQSNRLLKRMHVVGHAS--EKYDPCTEKHSVVYFNQPEVQKALHVIPAVAPAKWETCIGVVNNNWLDSPMTVLDIYHELIHSGLRIWMFSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDKGHVGGWTQEYAGLTFVTVRGAG 490
            YSI+T +C     ++  L  R   V H      YDPCTEK+S +YFN PEVQKA+H         W+ C  +V   W DSP+++L IY ELI +GLRIW+FSGDTD+V+P+T TRYSI AL L  +  W  W D G VGGW+Q Y GLT VT+ GAG
Sbjct:  273 YSIYTVTCK---KEAAALRSRFSRVRHPWMWRAYDPCTEKYSGMYFNSPEVQKAMHANITGLAYPWKGCSDIVGEKWADSPLSMLPIYKELIAAGLRIWVFSGDTDSVVPITGTRYSIRALKLQPLSKWYPWNDDGQVGGWSQVYKGLTLVTIHGAG 426          
The following BLAST results are available for this feature:
BLAST of CX288607 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
SCP29_ARATH3.525e-6064.81Serine carboxypeptidase-like 29 OS=Arabidopsis tha... [more]
CBP22_HORVU4.604e-6068.75Serine carboxypeptidase II-2 (Fragment) OS=Hordeum... [more]
SCP23_ARATH6.041e-4452.26Putative serine carboxypeptidase-like 23 OS=Arabid... [more]
SCP25_ARATH6.679e-4349.11Serine carboxypeptidase-like 25 OS=Arabidopsis tha... [more]
SCP27_ARATH8.723e-4353.55Serine carboxypeptidase-like 27 OS=Arabidopsis tha... [more]
CBP21_HORVU7.385e-4251.61Serine carboxypeptidase II-1 (Fragment) OS=Hordeum... [more]
SCP24_ARATH2.149e-4150.00Serine carboxypeptidase 24 OS=Arabidopsis thaliana... [more]
CBP2_WHEAT6.252e-4149.09Serine carboxypeptidase 2 OS=Triticum aestivum GN=... [more]
SCP22_ARATH1.393e-4050.30Serine carboxypeptidase-like 22 OS=Arabidopsis tha... [more]
SCP26_ARATH6.912e-4050.96Serine carboxypeptidase-like 26 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionC02002C12SK IF1 Citrus clementina cDNA clone C02002C12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288607 ID=CX288607; Name=CX288607; organism=Citrus clementina; type=EST; length=491bp
AATGAAATTGGAAACATTGACTCAATACAGTATTTTCACCCCTTCCTGCA
CTGCCAGTGTTAGCCAGTCAAATCGGCTGCTTAAAAGAATGCATGTTGTT
GGTCACGCCAGCGAGAAGTATGATCCTTGCACTGAGAAGCACTCAGTTGT
GTACTTCAATCAACCTGAGGTTCAAAAGGCTCTCCATGTTATTCCAGCAG
TTGCACCGGCCAAATGGGAGACTTGCATTGGTGTGGTAAATAATAACTGG
CTGGATTCTCCTATGACAGTCCTGGACATTTATCATGAGCTTATACATTC
TGGACTTCGTATATGGATGTTCAGTGGTGATACAGATGCTGTGATCCCAG
TTACGTCCACCCGTTACAGCATAGATGCTCTTAATCTTCCAACAGTGAAG
CCCTGGCGTGCCTGGTATGACAAGGGGCACGTGGGAGGATGGACCCAAGA
GTATGCTGGACTTACCTTTGTCACCGTGAGGGGAGCAGGCC
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