CX288766

Overview
NameCX288766
Unique NameCX288766
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length474
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288766 vs. ExPASy Swiss-Prot
Match: C76C4_ARATH (Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CYP76C4 PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 1.686e-56
Identity = 101/154 (65.58%), Postives = 123/154 (79.87%), Query Frame = 1
Query:    1 MAELLHNPEALLKTKLELEQIVGKGNPIEESDISQLPYLQAVVKETFRLHPAVPLLIPRTALXDVEVAGFTVPKGAQVFVNVWAIGRDESTWDKPHSFMPERFLGLDVDFKGRNFELIPFGTGRRICPGLPLAIKMLHLMLGSLINSFDWKLEN 462
            MAELL NP+ ++K + E+++++G+ + ++ESDIS LPYLQAVVKETFRLHPA PLL+PR A  DVEV GF VPK  QV VNVWAIGRD S W+ P  F PERF+G D+D KGR++EL PFG GRRICPGLPLA+K + LML SL+ SFDWKL N
Sbjct:  324 MAELLRNPKTMVKAQAEMDRVLGQNSVVQESDISGLPYLQAVVKETFRLHPAAPLLVPRKAESDVEVLGFMVPKDTQVLVNVWAIGRDPSVWENPSQFEPERFMGKDIDVKGRDYELTPFGGGRRICPGLPLAVKTVSLMLASLLYSFDWKLPN 477          
BLAST of CX288766 vs. ExPASy Swiss-Prot
Match: C76C2_ARATH (Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CYP76C2 PE=2 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 2.202e-56
Identity = 102/154 (66.23%), Postives = 121/154 (78.57%), Query Frame = 1
Query:    1 MAELLHNPEALLKTKLELEQIVGKGNPIEESDISQLPYLQAVVKETFRLHPAVPLLIPRTALXDVEVAGFTVPKGAQVFVNVWAIGRDESTWDKPHSFMPERFLGLDVDFKGRNFELIPFGTGRRICPGLPLAIKMLHLMLGSLINSFDWKLEN 462
            MAELL NPE ++K + E++ ++G+   +EESDIS LPYLQAVVKETFRLHPA PLL+PR A  DVEV GF VPK  QVFVNVWAIGRD + W+    F PERFLG D+D +GR++EL PFG GRRICPGLPLA+K + LML SL+ SFDWKL N
Sbjct:  325 MAELLRNPETMVKAQAEIDCVIGQKGVVEESDISALPYLQAVVKETFRLHPAAPLLVPRKAESDVEVLGFMVPKDTQVFVNVWAIGRDPNVWENSSRFKPERFLGKDIDLRGRDYELTPFGAGRRICPGLPLAVKTVPLMLASLLYSFDWKLPN 478          
BLAST of CX288766 vs. ExPASy Swiss-Prot
Match: C76C1_ARATH (Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CYP76C1 PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 1.477e-52
Identity = 97/152 (63.82%), Postives = 116/152 (76.32%), Query Frame = 1
Query:    1 MAELLHNPEALLKTKLELEQIVGKGNPIEESDISQLPYLQAVVKETFRLHPAVPLLIPRTALXDVEVAGFTVPKGAQVFVNVWAIGRDESTWDKPHSFMPERFLGLDVDFKGRNFELIPFGTGRRICPGLPLAIKMLHLMLGSLINSFDWKL 456
            M ELL NP+ + K + E++ ++G+   +EESDIS+LPYLQAVVKETFRLH  VPLLIPR A  D E+ GF V K  QV VNVWAIGRD S WD P  F PERFLG D+D +GR++EL PFG GRRICPG+PLA+K + LML SL+ SFDWKL
Sbjct:  324 MTELLKNPKTMAKAQAEIDCVIGQNGIVEESDISKLPYLQAVVKETFRLHTPVPLLIPRKAESDAEILGFMVLKDTQVLVNVWAIGRDPSVWDNPSQFEPERFLGKDMDVRGRDYELTPFGAGRRICPGMPLAMKTVSLMLASLLYSFDWKL 475          
BLAST of CX288766 vs. ExPASy Swiss-Prot
Match: C76C3_ARATH (Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CYP76C3 PE=2 SV=2)

HSP 1 Score: 193.356 bits (490), Expect = 4.446e-49
Identity = 89/154 (57.79%), Postives = 116/154 (75.32%), Query Frame = 1
Query:    1 MAELLHNPEALLKTKLELEQIVGKGNPIEESDISQLPYLQAVVKETFRLHPAVPLLIPRTALXDVEVAGFTVPKGAQVFVNVWAIGRDESTWDKPHSFMPERFLGLDVDFKGRNFELIPFGTGRRICPGLPLAIKMLHLMLGSLINSFDWKLEN 462
            M EL  + E ++K + E+ Q++G+   ++ESDI  LPYLQA+VKET RLHPA PL IPR +  DV++ GF VPK  QV VNVWAIGRD S W+ P  F PERFL  + D KGR+FELIPFG+GRR+CPG+ +A+K +H++L SL+ SFDWKL+N
Sbjct:  326 MTELFRSTEKMVKAQSEIRQVIGQNGFVQESDIPSLPYLQAIVKETLRLHPAAPL-IPRKSESDVQIMGFLVPKNTQVVVNVWAIGRDASVWENPMKFEPERFLLRETDVKGRDFELIPFGSGRRMCPGISMALKTMHMVLASLLYSFDWKLQN 478          
BLAST of CX288766 vs. ExPASy Swiss-Prot
Match: C76A1_SOLME (Cytochrome P450 76A1 (Fragment) OS=Solanum melongena GN=CYP76A1 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 1.690e-48
Identity = 86/152 (56.58%), Postives = 108/152 (71.05%), Query Frame = 1
Query:    1 MAELLHNPEALLKTKLELEQIVGKGNPIEESDISQLPYLQAVVKETFRLHPAVPLLIPRTALXDVEVAGFTVPKGAQVFVNVWAIGRDESTWDKPHSFMPERFLGLDVDFKGRNFELIPFGTGRRICPGLPLAIKMLHLMLGSLINSFDWKL 456
            + ELL +P+A+ K KLE+ Q++G     EE DI  LPY+QAV+KE  RLHP +PLLIPR A+ D +  G+ +PKG QV VN WAIGRD   WD P  F PERFL   VD KG+N+ELIPFG GRR+C GLPL  +M+H   GSL++ FDW+L
Sbjct:  284 LTELLRHPQAMAKVKLEILQVIGPNKKFEECDIDSLPYMQAVLKEQLRLHPPLPLLIPRKAIQDTKFMGYDIPKGTQVLVNAWAIGRDPEYWDNPFEFKPERFLESKVDVKGQNYELIPFGAGRRMCVGLPLGHRMMHFTFGSLLHEFDWEL 435          
BLAST of CX288766 vs. ExPASy Swiss-Prot
Match: C76B1_HELTU (7-ethoxycoumarin O-deethylase OS=Helianthus tuberosus GN=CYP76B1 PE=1 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 3.764e-48
Identity = 83/155 (53.55%), Postives = 114/155 (73.55%), Query Frame = 1
Query:    1 MAELLHNPEALLKTKLELEQIVGKGNPIEESDISQLPYLQAVVKETFRLHPAVPLLIPRTALXDVEVAGFTVPKGAQVFVNVWAIGRDESTWDKPHSFMPERFLGLDVDFKGRNFELIPFGTGRRICPGLPLAIKMLHLMLGSLINSFDWKLENE 465
            M ELL  P  + K K ELE+++GKG+ ++E D+ +LPYL  +VKE  RLHP  PLL+PR  +  VE++G+T+P G  VFVN WAIGRD + WD    F P+RFL   +D +G +F+LIPFG GRRICPG+PLA +M+ +MLGSL+N+FDWK++ +
Sbjct:  306 MTELLRKPHIMSKAKEELEKVIGKGSIVKEDDVLRLPYLSCIVKEVLRLHPPSPLLLPRKVVTQVELSGYTIPAGTLVFVNAWAIGRDPTVWDDSLEFKPQRFLESRLDVRGHDFDLIPFGAGRRICPGIPLATRMVPIMLGSLLNNFDWKIDTK 460          
BLAST of CX288766 vs. ExPASy Swiss-Prot
Match: C76A2_SOLME (Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76A2 PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 1.025e-45
Identity = 82/152 (53.95%), Postives = 105/152 (69.08%), Query Frame = 1
Query:    1 MAELLHNPEALLKTKLELEQIVGKGNPIEESDISQLPYLQAVVKETFRLHPAVPLLIPRTALXDVEVAGFTVPKGAQVFVNVWAIGRDESTWDKPHSFMPERFLGLDVDFKGRNFELIPFGTGRRICPGLPLAIKMLHLMLGSLINSFDWKL 456
            + ELL +PEA+ K K E+ Q +      E+SDI  LPY+QAV+KE+ RLHP +P LIPR  + D +  G+ VPK  QV VN WAIGRD   WD P SF PERFLG  +D KG+++ LIPFG GRR+C GLPL  +M+H  LGSL+  F+W+L
Sbjct:  322 LTELLRHPEAMAKVKTEISQAIEPNRKFEDSDIENLPYMQAVLKESLRLHPPLPFLIPRETIQDTKFMGYDVPKDTQVLVNAWAIGRDPECWDDPMSFKPERFLGSKIDVKGQHYGLIPFGAGRRMCVGLPLGHRMMHFALGSLLREFEWEL 473          
BLAST of CX288766 vs. ExPASy Swiss-Prot
Match: C80A1_BERST (Berbamunine synthase OS=Berberis stolonifera GN=CYP80A1 PE=1 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 8.122e-43
Identity = 77/162 (47.53%), Postives = 114/162 (70.37%), Query Frame = 1
Query:    1 MAELLHNPEALLKTKLELEQIVGKGNPIEESDISQLPYLQAVVKETFRLHPAVPLLIPRTALXDVEVAGFTVPKGAQVFVNVWAIGRDESTWDKPHSFMPERFLGLDVDFKGRNFELIPFGTGRRICPGLPLAIKMLHLMLGSLINSFDWKL----ENENMD 474
            +A+L+ NP+ L K + EL+++VG+ + ++ES  S+LPYLQA VKET RL+P + ++IP   +   +V G+T+PKG  V VN  AIGRD   W  P  F PERFL  D+++ G+ F+ IPFG+GRRICPG PLA++++ L+L SL+++F W+L     NE +D
Sbjct:  303 LAQLIKNPDKLAKLREELDRVVGRSSTVKESHFSELPYLQACVKETMRLYPPISIMIPHRCMETCQVMGYTIPKGMDVHVNAHAIGRDPKDWKDPLKFQPERFLDSDIEYNGKQFQFIPFGSGRRICPGRPLAVRIIPLVLASLVHAFGWELPDGVPNEKLD 464          
BLAST of CX288766 vs. ExPASy Swiss-Prot
Match: C80B2_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS=Eschscholzia californica GN=CYP80B2 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 6.876e-42
Identity = 78/154 (50.65%), Postives = 103/154 (66.88%), Query Frame = 1
Query:    1 MAELLHNPEALLKTKLELEQIVGKGNPIEESDISQLPYLQAVVKETFRLHPAVPLLIPRTALXDVEVAGFTVPKGAQVFVNVWAIGRDESTWDKPHSFMPERFLGLDVDFKGRNFELIPFGTGRRICPGLPLAIKMLHLMLGSLINSFDWKLEN 462
            M EL  NP+   K + EL+ +VG+ + ++ESD   LPYL+A VKET RLHP  PLL+PR AL    +  +T+PK  Q+ VN W IGRD  TW  P +F PERFL   VDF+G +F LIPFG GRRICPGLP+A + + L++ + + + DW L N
Sbjct:  305 MTELTKNPKITAKLRSELQTVVGERS-VKESDFPNLPYLEATVKETLRLHPPTPLLLPRRALETCTILNYTIPKDCQIMVNAWGIGRDPKTWIDPLTFSPERFLNSSVDFRGNDFSLIPFGAGRRICPGLPIANQFIALLVATFVQNLDWCLPN 457          
BLAST of CX288766 vs. ExPASy Swiss-Prot
Match: C80B1_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (Fragment) OS=Eschscholzia californica GN=CYP80B1 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 6.876e-42
Identity = 77/154 (50.00%), Postives = 103/154 (66.88%), Query Frame = 1
Query:    1 MAELLHNPEALLKTKLELEQIVGKGNPIEESDISQLPYLQAVVKETFRLHPAVPLLIPRTALXDVEVAGFTVPKGAQVFVNVWAIGRDESTWDKPHSFMPERFLGLDVDFKGRNFELIPFGTGRRICPGLPLAIKMLHLMLGSLINSFDWKLEN 462
            M EL  NP+   K + E++ +VG+ + ++ESD   LPYL+A VKET RLHP  PLL+PR AL    +  +T+PK  Q+ VN W IGRD  TW  P +F PERFL   VDF+G +F LIPFG GRRICPGLP+A + + L++ + + + DW L N
Sbjct:  304 MTELTKNPKITAKIRSEIQTVVGERS-VKESDFPNLPYLEATVKETLRLHPPTPLLLPRRALETCTILNYTIPKDCQIMVNAWGIGRDPKTWTDPLTFSPERFLNSSVDFRGNDFSLIPFGAGRRICPGLPIANQFIALLVATFVQNLDWCLPN 456          
The following BLAST results are available for this feature:
BLAST of CX288766 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
C76C4_ARATH1.686e-5665.58Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CY... [more]
C76C2_ARATH2.202e-5666.23Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CY... [more]
C76C1_ARATH1.477e-5263.82Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CY... [more]
C76C3_ARATH4.446e-4957.79Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CY... [more]
C76A1_SOLME1.690e-4856.58Cytochrome P450 76A1 (Fragment) OS=Solanum melonge... [more]
C76B1_HELTU3.764e-4853.557-ethoxycoumarin O-deethylase OS=Helianthus tubero... [more]
C76A2_SOLME1.025e-4553.95Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76... [more]
C80A1_BERST8.122e-4347.53Berbamunine synthase OS=Berberis stolonifera GN=CY... [more]
C80B2_ESCCA6.876e-4250.65(S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS... [more]
C80B1_ESCCA6.876e-4250.00(S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (F... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC02004B09SK IF1 Citrus clementina cDNA clone C02004B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288766 ID=CX288766; Name=CX288766; organism=Citrus clementina; type=EST; length=474bp
ATGGCAGAACTACTCCACAACCCTGAGGCTCTATTGAAAACAAAATTGGA
GCTAGAACAAATAGTTGGCAAAGGCAACCCAATTGAGGAATCTGACATTT
CTCAGTTACCTTATCTACAAGCAGTTGTTAAAGAAACTTTCAGGTTGCAC
CCGGCAGTTCCCTTATTAATTCCCCGCACAGCCTTANAAGATGTTGAAGT
TGCAGGCTTCACAGTGCCAAAAGGTGCACAAGTATTTGTCAATGTATGGG
CTATTGGCAGAGACGAAAGCACATGGGACAAACCTCACTCTTTTATGCCT
GAAAGATTCTTGGGATTAGATGTTGATTTCAAAGGCCGGAATTTTGAGCT
AATCCCCTTCGGAACTGGGCGACGAATTTGTCCTGGTTTACCATTAGCAA
TCAAAATGTTACATCTAATGTTAGGTTCACTTATTAACTCTTTTGATTGG
AAACTTGAAAATGAAAACATGGAT
back to top