CX288794

Overview
NameCX288794
Unique NameCX288794
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length546
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288794 vs. ExPASy Swiss-Prot
Match: EST_HEVBR (Esterase OS=Hevea brasiliensis PE=1 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 9.201e-69
Identity = 127/179 (70.95%), Postives = 145/179 (81.01%), Query Frame = 1
Query:   13 AEKPCDFPAIFNLGDSNSDSGGLAAAFTPPNSPYGETYFHMPAGRFSDGRLIIDFIAQSFDLPYISAYLNSLGTNFSHGANFATAASTIRLPTRIIPG-GGFSPFYLDVQLQQFSQFKNRSQIIRNRGGIFASLMPREEYFSKALYTFDIGQNDLGAGFFGNMSVEEVNESIPDIINKF 546
            A + CDFPAIFN GDSNSD+GG AAAF P N PYGET+FH   GR+SDGRLIIDFIA+SF+LPY+S YL+SLG+NF HGA+FATA STI+LPT IIP  GGFSPFYLDVQ  QF QF  RSQ IR  GGIFA L+P E YF KALYTFDIGQNDL  GF  N++VEEVN ++PD++N F
Sbjct:   26 ASETCDFPAIFNFGDSNSDTGGKAAAFYPLNPPYGETFFHRSTGRYSDGRLIIDFIAESFNLPYLSPYLSSLGSNFKHGADFATAGSTIKLPTTIIPAHGGFSPFYLDVQYSQFRQFIPRSQFIRETGGIFAELVPEEYYFEKALYTFDIGQNDLTEGFL-NLTVEEVNATVPDLVNSF 203          
BLAST of CX288794 vs. ExPASy Swiss-Prot
Match: GDL53_ARATH (GDSL esterase/lipase At3g26430 OS=Arabidopsis thaliana GN=At3g26430 PE=2 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.020e-59
Identity = 109/177 (61.58%), Postives = 136/177 (76.84%), Query Frame = 1
Query:    4 PVSAEKPCDFPAIFNLGDSNSDSGGLAAAFTPPNSPYGETYFHMPAGRFSDGRLIIDFIAQSFDLPYISAYLNSLGTNFSHGANFATAASTIRLPTRIIPGGGFSPFYLDVQLQQFSQFKNRSQIIRNRGGIFASLMPREEYFSKALYTFDIGQNDLGAGFFGNMSVEEVNESIPDI 534
            P +    C+FPAIFN GDSNSD+GGL+A+F     P G+T+FH P+GRFSDGRLIIDFIA+   LPY++A+L+S+G+NFSHGANFATA ST+R P   I   G SP  LDVQL QFS F  RSQ+IRNRGG+F  L+P++EYFS+ALYTFDIGQNDL AG   NM+ +++   IPD+
Sbjct:   20 PRACSPSCNFPAIFNFGDSNSDTGGLSASFGQAPYPNGQTFFHSPSGRFSDGRLIIDFIAEELGLPYLNAFLDSIGSNFSHGANFATAGSTVRPPNATIAQSGVSPISLDVQLVQFSDFITRSQLIRNRGGVFKKLLPKKEYFSQALYTFDIGQNDLTAGLKLNMTSDQIKAYIPDV 196          
BLAST of CX288794 vs. ExPASy Swiss-Prot
Match: FUCO3_ARATH (Alpha-L-fucosidase 3 OS=Arabidopsis thaliana GN=FXG1 PE=2 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 3.875e-59
Identity = 107/182 (58.79%), Postives = 137/182 (75.27%), Query Frame = 1
Query:    1 SPVSAEKPCDFPAIFNLGDSNSDSGGLAAAFTPPNSPYGETYFHMPAGRFSDGRLIIDFIAQSFDLPYISAYLNSLGTNFSHGANFATAASTIRLPTRIIPGGGFSPFYLDVQLQQFSQFKNRSQIIRNRGGIFASLMPREEYFSKALYTFDIGQNDLGAGFFGNMSVEEVNESIPDIINKF 546
            SP +    C FPAIFN GDSNSD+GGL+AAF     P+G ++F  PAGR+ DGRL+IDFIA+S  LPY+SA+L+S+G+NFSHGANFATA S IR     +   GFSPF LDVQ  QF  F NRSQ +R+RGG++ +++P  + FSKALYTFDIGQNDL AG+F N +VE+V   +P+II++F
Sbjct:   18 SPSTHAHQCHFPAIFNFGDSNSDTGGLSAAFGQAGPPHGSSFFGSPAGRYCDGRLVIDFIAESLGLPYLSAFLDSVGSNFSHGANFATAGSPIRALNSTLRQSGFSPFSLDVQFVQFYNFHNRSQTVRSRGGVYKTMLPESDSFSKALYTFDIGQNDLTAGYFANKTVEQVETEVPEIISQF 199          
BLAST of CX288794 vs. ExPASy Swiss-Prot
Match: GDL76_ARATH (GDSL esterase/lipase At5g14450 OS=Arabidopsis thaliana GN=At5g14450 PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.207e-52
Identity = 104/180 (57.78%), Postives = 128/180 (71.11%), Query Frame = 1
Query:    7 VSAEKPCDFPAIFNLGDSNSDSGGLAAAFTPPNSPYGETYFHMPAGRFSDGRLIIDFIAQSFDLPYISAYLNSLGTNFSHGANFATAASTIRLPTRIIPGGGFSPFYLDVQLQQFSQFKNRSQII--RNRGGIFASLMPREEYFSKALYTFDIGQNDLGAGFFGNMSVEEVNESIPDIIN 540
            VS +  C FPAI+N GDSNSD+GG++AAF P   PYG+ +FH P GR SDGRL IDFIA+   LPY+SAYLNSLG+NF HGANFAT  STIR     I   G SPF LD+Q+ QF QFK RS ++  + +       +PR+E F+KALYTFDIGQNDL  G F  MSV+++  +IPDI+N
Sbjct:   31 VSVQPTCTFPAIYNFGDSNSDTGGISAAFEPIRDPYGQGFFHRPTGRDSDGRLTIDFIAERLGLPYLSAYLNSLGSNFRHGANFATGGSTIRRQNETIFQYGISPFSLDMQIAQFDQFKARSALLFTQIKSRYDREKLPRQEEFAKALYTFDIGQNDLSVG-FRTMSVDQLKATIPDIVN 209          
BLAST of CX288794 vs. ExPASy Swiss-Prot
Match: GDL61_ARATH (GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana GN=At4g01130 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 3.084e-40
Identity = 85/176 (48.30%), Postives = 111/176 (63.07%), Query Frame = 1
Query:   16 EKPCDFPAIFNLGDSNSDSGGLAAAFTPPNSPYGETYFHMPAGRFSDGRLIIDFIAQSFDLPYISAYLNSLGTNFSHGANFATAASTIRLPTRIIPGGGFSPFYLDVQLQQFSQFKNRSQIIRNRGGIFASLMPREEYFSKALYTFDIGQNDLGAGFFGNMSVEEVNESIPDIINK 543
            +  CDF AIFN GDSNSD+GG  AAF   + P+G TYF  PAGR SDGRLIIDF+A+S  +P++S YL S+G++F HGANFAT AST+ LP   +   G SPF L +QL Q  QFK       +       ++P +  F K+LYTF IGQND  +    ++ VE V   +P +I +
Sbjct:   27 DSKCDFEAIFNFGDSNSDTGGFWAAFPAQSGPWGMTYFKKPAGRASDGRLIIDFLAKSLGMPFLSPYLQSIGSDFRHGANFATLASTVLLPNTSLFVSGISPFSLAIQLNQMKQFKVNVDESHSLDRPGLKILPSKIVFGKSLYTFYIGQNDFTSN-LASIGVERVKLYLPQVIGQ 201          
BLAST of CX288794 vs. ExPASy Swiss-Prot
Match: GDL54_ARATH (GDSL esterase/lipase At3g27950 OS=Arabidopsis thaliana GN=At3g27950 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 6.871e-40
Identity = 88/174 (50.57%), Postives = 112/174 (64.37%), Query Frame = 1
Query:   25 CDFPAIFNLGDSNSDSGGLAAAFTPPNSPYGETYFHMPAGRFSDGRLIIDFIAQSFDLPYISAYLNSLGTNFSHGANFATAASTIRLPTRIIPGGGFSPFYLDVQLQQFSQFKNRSQIIRNRGGIFASLMPREEYFSKALYTFDIGQNDLGAGFFGNMSVEEVNESIPDIINKF 546
            C+FPA+FN GDSNSD+G ++AA      P G  +F   AGR SDGRLIIDFI ++  LPY++ YL+S+G N+ HGANFAT  S IR PT       FSPF+L  Q+ QF  FK R+  + N+     + +    YFSKALYT DIGQNDL  G F NM+ E++  +IP II  F
Sbjct:   28 CNFPAVFNFGDSNSDTGAISAAIGEVPPPNGVAFFGRSAGRHSDGRLIIDFITENLTLPYLTPYLDSVGANYRHGANFATGGSCIR-PTLAC----FSPFHLGTQVSQFIHFKTRTLSLYNQTNGKFNRLSHTNYFSKALYTLDIGQNDLAIG-FQNMTEEQLKATIPLIIENF 195          
BLAST of CX288794 vs. ExPASy Swiss-Prot
Match: GDL22_ARATH (GDSL esterase/lipase At1g54790 OS=Arabidopsis thaliana GN=At1g54790 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.696e-30
Identity = 76/176 (43.18%), Postives = 108/176 (61.36%), Query Frame = 1
Query:   28 DFPAIFNLGDSNSDSGGLAAAF-TPPNSPYGETYFHMPAGRFSDGRLIIDFIAQSFDLPYISAYLNSLG-TNFSHGANFATAASTIRLPTRIIPGGGFSPFYLDVQLQQFSQFKNRS-QIIRNRGGIFASLMPREEYFSKALYTFDIGQNDLGAGFFGNMSVEEVNESIPDIINKF 546
            ++P+ FN GDSNSD+G L A      + P G+  F   + RF DGRL+IDF+    DLP+++ YL+SLG  NF  G NFA A STI LP         SPF  D+Q+ QF +FK+R+ +++   G  +   +P  +Y+SK LY  DIGQND+ AG F + ++++V  SIP I+  F
Sbjct:   28 NYPSAFNFGDSNSDTGDLVAGLGIRLDLPNGQNSFKTSSQRFCDGRLVIDFLMDEMDLPFLNPYLDSLGLPNFKKGCNFAAAGSTI-LPAN---PTSVSPFSFDLQISQFIRFKSRAIELLSKTGRKYEKYLPPIDYYSKGLYMIDIGQNDI-AGAFYSKTLDQVLASIPSILETF 198          
BLAST of CX288794 vs. ExPASy Swiss-Prot
Match: GDL49_ARATH (GDSL esterase/lipase At3g05180 OS=Arabidopsis thaliana GN=At3g05180 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.216e-28
Identity = 73/176 (41.48%), Postives = 104/176 (59.09%), Query Frame = 1
Query:   28 DFPAIFNLGDSNSDSGGLAAAFT-PPNSPYGETYFHMP-AGRFSDGRLIIDFIAQSFDLPYISAYLNSLG-TNFSHGANFATAASTIRLPTRIIPGGGFSPFYLDVQLQQFSQFKNRSQIIRNRGGIFASLMPREEYFSKALYTFDIGQNDLGAGFFGNMSVEEVNESIPDIINKF 546
            DFPA+FN GDSNSD+G L++     P   Y  T+F  P +GRF +GRLI+DF+ ++ D PY+  YL+S+    +  G NFA AASTI+          +SPF   VQ+ QF  FK++   +  +       +P E +FS  LY FDIGQND+ AG F   +V++V   +P I++ F
Sbjct:   33 DFPAVFNFGDSNSDTGELSSGLGFLPQPSYEITFFRSPTSGRFCNGRLIVDFLMEAIDRPYLRPYLDSISRQTYRRGCNFAAAASTIQKAN----AASYSPFGFGVQVSQFITFKSKVLQLIQQDEELQRYLPSEYFFSNGLYMFDIGQNDI-AGAFYTKTVDQVLALVPIILDIF 203          
BLAST of CX288794 vs. ExPASy Swiss-Prot
Match: LIP4_ARATH (GDSL esterase/lipase LIP-4 OS=Arabidopsis thaliana GN=LIP4 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.034e-28
Identity = 73/172 (42.44%), Postives = 94/172 (54.65%), Query Frame = 1
Query:   34 PAIFNLGDSNSDSGGLAAAFTPP-NSPYGETYFHMPAGRFSDGRLIIDFIAQSFDLPYISAYLNSLG-TNFSHGANFATAASTIRLPTRIIPGGGFSPFYLDVQLQQFSQFKNRSQIIRNRGGIFASLMPREEYFSKALYTFDIGQNDLGAGFFGNMSVEEVNESIPDIINK 543
            P IFN GDSNSD+GGL A    P   P G  +F    GR SDGRL+IDF+ QS +   +  YL+SLG T F +GANFA A S   LP  +       PF L++Q++QFS FK+RS  + +       +      F  ALY  DIGQND+   F    S  +  + IP II +
Sbjct:   39 PVIFNFGDSNSDTGGLVAGLGYPIGFPNGRLFFRRSTGRLSDGRLLIDFLCQSLNTSLLRPYLDSLGRTRFQNGANFAIAGSPT-LPKNV-------PFSLNIQVKQFSHFKSRSLELASSSNSLKGMFISNNGFKNALYMIDIGQNDIARSFARGNSYSQTVKLIPQIITE 202          
BLAST of CX288794 vs. ExPASy Swiss-Prot
Match: GDL2_ARATH (GDSL esterase/lipase At1g09390 OS=Arabidopsis thaliana GN=At1g09390 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 5.108e-27
Identity = 71/172 (41.28%), Postives = 98/172 (56.98%), Query Frame = 1
Query:   34 PAIFNLGDSNSDSGGLAAAFTPP-NSPYGETYFHMPAGRFSDGRLIIDFIAQSFDLPYISAYLNSL-GTNFSHGANFATAASTIRLPTRIIPGGGFSPFYLDVQLQQFSQFKNRSQIIRNRGGIFASLMPREEYFSKALYTFDIGQNDLGAGFFGNMSVEEVNESIPDIINK 543
            P IFN GDSNSD+GGL A        P G ++F    GR SDGRL+IDF+ QS +   ++ YL+SL G+ F +GANFA   S+  LP  +       PF L++QL QF  FK+R+  + +       +M  E  F  ALY  DIGQND+   F   +S   V + IP++I++
Sbjct:   36 PVIFNFGDSNSDTGGLVAGLGYSIGLPNGRSFFQRSTGRLSDGRLVIDFLCQSLNTSLLNPYLDSLVGSKFQNGANFAIVGSST-LPRYV-------PFALNIQLMQFLHFKSRALELASISDPLKEMMIGESGFRNALYMIDIGQNDIADSFSKGLSYSRVVKLIPNVISE 199          
The following BLAST results are available for this feature:
BLAST of CX288794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
EST_HEVBR9.201e-6970.95Esterase OS=Hevea brasiliensis PE=1 SV=1[more]
GDL53_ARATH1.020e-5961.58GDSL esterase/lipase At3g26430 OS=Arabidopsis thal... [more]
FUCO3_ARATH3.875e-5958.79Alpha-L-fucosidase 3 OS=Arabidopsis thaliana GN=FX... [more]
GDL76_ARATH1.207e-5257.78GDSL esterase/lipase At5g14450 OS=Arabidopsis thal... [more]
GDL61_ARATH3.084e-4048.30GDSL esterase/lipase At4g01130 OS=Arabidopsis thal... [more]
GDL54_ARATH6.871e-4050.57GDSL esterase/lipase At3g27950 OS=Arabidopsis thal... [more]
GDL22_ARATH1.696e-3043.18GDSL esterase/lipase At1g54790 OS=Arabidopsis thal... [more]
GDL49_ARATH1.216e-2841.48GDSL esterase/lipase At3g05180 OS=Arabidopsis thal... [more]
LIP4_ARATH6.034e-2842.44GDSL esterase/lipase LIP-4 OS=Arabidopsis thaliana... [more]
GDL2_ARATH5.108e-2741.28GDSL esterase/lipase At1g09390 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC02004E03SK IF1 Citrus clementina cDNA clone C02004E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288794 ID=CX288794; Name=CX288794; organism=Citrus clementina; type=EST; length=546bp
AGCCCTGTCTCTGCTGAGAAACCTTGTGATTTTCCAGCGATCTTTAACTT
GGGCGACTCGAATTCGGATTCTGGTGGATTGGCCGCCGCTTTTACTCCGC
CAAACTCGCCTTATGGCGAGACTTACTTCCACATGCCGGCGGGTAGATTC
TCCGATGGACGTCTCATCATCGATTTCATCGCTCAGAGCTTTGATCTGCC
ATATATCAGCGCATACCTTAACTCTCTAGGAACCAACTTCAGTCATGGAG
CAAATTTTGCCACAGCAGCATCAACTATTAGACTACCAACCAGAATCATA
CCCGGTGGCGGATTTAGTCCTTTTTACTTGGACGTGCAGTTGCAACAATT
CAGTCAATTCAAAAACAGGTCACAGATTATCAGAAATCGAGGAGGAATAT
TTGCAAGTTTAATGCCGAGAGAGGAATATTTTTCCAAGGCTCTATACACC
TTTGATATCGGTCAGAATGATCTTGGTGCTGGCTTCTTTGGTAACATGTC
TGTGGAGGAAGTTAATGAATCTATCCCTGATATAATCAACAAGTTC
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