CX288814
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288814 vs. ExPASy Swiss-Prot
Match: TOM20_SOLTU (Mitochondrial import receptor subunit TOM20 OS=Solanum tuberosum GN=TOM20 PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 1.793e-28 Identity = 61/110 (55.45%), Postives = 76/110 (69.09%), Query Frame = 2 Query: 2 IDPAKHYTLWSLGNAHTSCGFLTADLSEAKGDFDKASECFQRAVDEEPTNELYQKSLEVSTKAPELHMELHKHGINQQTL--XXXXXXXXXXXXXXXXXDLKYDIFGWVI 325 ++P KH LW LGNAHTS FLT D+ EAK F+KA++CFQ+A D +P+N+LY+KSLEV+ KAPELHME+H+HG QQT+ DLKYDIFGWVI Sbjct: 70 VNPEKHDALWCLGNAHTSHVFLTPDMDEAKVYFEKATQCFQQAFDADPSNDLYRKSLEVTAKAPELHMEIHRHGPMQQTMAAEPSTSTSTKSSKKTKSSDLKYDIFGWVI 179
BLAST of CX288814 vs. ExPASy Swiss-Prot
Match: TOM20_ORYSI (Probable mitochondrial import receptor subunit TOM20 OS=Oryza sativa subsp. indica GN=TOM20 PE=2 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 7.796e-24 Identity = 52/108 (48.15%), Postives = 69/108 (63.89%), Query Frame = 2 Query: 2 IDPAKHYTLWSLGNAHTSCGFLTADLSEAKGDFDKASECFQRAVDEEPTNELYQKSLEVSTKAPELHMELHKHGINQQTLXXXXXXXXXXXXXXXXXDLKYDIFGWVI 325 IDP K LW LGNA TS GF T+D +A F+KA++CFQ+AVD EP N+LY+KSL++S+KAPELHME+H+ +Q + D YD+FGWV+ Sbjct: 72 IDPMKADALWCLGNAQTSHGFFTSDTVKANEFFEKATQCFQKAVDVEPANDLYRKSLDLSSKAPELHMEIHRQMASQASQAASSTSNTRQSRKKKDSDFWYDVFGWVV 179
BLAST of CX288814 vs. ExPASy Swiss-Prot
Match: TOM20_ORYSJ (Probable mitochondrial import receptor subunit TOM20 OS=Oryza sativa subsp. japonica GN=TOM20 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.470e-22 Identity = 52/109 (47.71%), Postives = 69/109 (63.30%), Query Frame = 2 Query: 2 IDPAKHYTLWSLGNAHTSCGFLTADLSEAKGDFDKASECFQRAVDEEPTNELYQKSLEVSTKAPELHMELHKHGINQQT-LXXXXXXXXXXXXXXXXXDLKYDIFGWVI 325 IDP K LW LGNA TS GF T+D +A F+KA++CFQ+AVD EP N+LY+KSL++S+KAPELHME+H+ +Q + D YD+FGWV+ Sbjct: 72 IDPMKADALWCLGNAQTSHGFFTSDTVKANEFFEKATQCFQKAVDVEPANDLYRKSLDLSSKAPELHMEIHRQMASQASQAASSTSNTRQSRKKKKDSDFWYDVFGWVV 180
BLAST of CX288814 vs. ExPASy Swiss-Prot
Match: TO203_ARATH (Mitochondrial import receptor subunit TOM20-3 OS=Arabidopsis thaliana GN=TOM20-3 PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 5.229e-20 Identity = 50/111 (45.05%), Postives = 65/111 (58.56%), Query Frame = 2 Query: 2 IDPAKHYTLWSLGNAHTSCGFLTADLSEAKGDFDKASECFQRAVDEEPTNELYQKSLEVSTKAPELHMELHKHGINQQTL---XXXXXXXXXXXXXXXXXDLKYDIFGWVI 325 IDP K +W +GNA+TS FLT D +EAK +FD A++ FQ+AVDE+P N Y KSLE++ KAP+LH E +K G+ Q + D KYD GWVI Sbjct: 70 IDPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEMTAKAPQLHAEAYKQGLGSQPMGRVEAPAPPSSKAVKNKKSSDAKYDAMGWVI 180
BLAST of CX288814 vs. ExPASy Swiss-Prot
Match: TO204_ARATH (Mitochondrial import receptor subunit TOM20-4 OS=Arabidopsis thaliana GN=TOM20-4 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 7.551e-19 Identity = 48/108 (44.44%), Postives = 64/108 (59.26%), Query Frame = 2 Query: 2 IDPAKHYTLWSLGNAHTSCGFLTADLSEAKGDFDKASECFQRAVDEEPTNELYQKSLEVSTKAPELHMELHKHGINQQTLXXXXXXXXXXXXXXXXXDLKYDIFGWVI 325 IDP KH LW +GNAH S GFL++D +EA +F+KAS+ FQ AV+E+P +ELY+KSL +++KAPELH + KYD+FGWVI Sbjct: 68 IDPKKHDALWLIGNAHLSFGFLSSDQTEASDNFEKASQFFQLAVEEQPESELYRKSLTLASKAPELHTG---------GTAGPSSNSAKTMKQKKTSEFKYDVFGWVI 166
BLAST of CX288814 vs. ExPASy Swiss-Prot
Match: TO202_ARATH (Mitochondrial import receptor subunit TOM20-2 OS=Arabidopsis thaliana GN=TOM20-2 PE=1 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 1.090e-17 Identity = 47/118 (39.83%), Postives = 62/118 (52.54%), Query Frame = 2 Query: 2 IDPAKHYTLWSLGNAHTSCGFLTADLSEAKGDFDKASECFQRAVDEEPTNELYQKSLEVSTKAPELHMELHKHGINQQTL----------XXXXXXXXXXXXXXXXXDLKYDIFGWVI 325 I+P KH LW + NA+T+ F D EAK FDKA+E FQRA +E+P N+ Y+KSL+ S KAPELHM+ G+ QQ L + YD+ GW+I Sbjct: 71 INPGKHQALWCIANAYTAHAFYVHDPEEAKEHFDKATEYFQRAENEDPGNDTYRKSLDSSLKAPELHMQFMNQGMGQQILGGGGGGGGGGMASSNVSQSSKKKKRNTEFTYDVCGWII 188
BLAST of CX288814 vs. ExPASy Swiss-Prot
Match: TO201_ARATH (Mitochondrial import receptor subunit TOM20-1 OS=Arabidopsis thaliana GN=TOM20-1 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.191e-13 Identity = 42/110 (38.18%), Postives = 59/110 (53.64%), Query Frame = 2 Query: 2 IDPAKHYTLWSLGNAHTSCGFLTADLSEAKGDFDKASECFQRAVDEEPTNELYQKSLEVSTKAPELHMELHKHGINQQT--LXXXXXXXXXXXXXXXXXDLKYDIFGWVI 325 IDP KH +W LGNA+TS LT D ++A+ +F A F AV ++P N++Y KSLE++ KAP+LH HK+ + + D KY + GWVI Sbjct: 64 IDPMKHDAVWCLGNAYTSYARLTPDDTQARLNFGLAYLFFGIAVAQQPDNQVYHKSLEMADKAPQLHTGFHKNRLLSLLGGVETLAIPSPKVVKNKKSSDEKYIVMGWVI 173 The following BLAST results are available for this feature:
BLAST of CX288814 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288814 ID=CX288814; Name=CX288814; organism=Citrus clementina; type=EST; length=325bpback to top |