CX288843
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288843 vs. ExPASy Swiss-Prot
Match: APRR7_ARATH (Two-component response regulator-like APRR7 OS=Arabidopsis thaliana GN=APRR7 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.525e-23 Identity = 58/85 (68.24%), Postives = 66/85 (77.65%), Query Frame = 2 Query: 14 LNAGVTNLDSDNGAAGNS---GVGGITERISGNVVDEVWVAQREAALTKFRQKRKERCFGKRVRYQSRKKLAEQRPRVRGQFVRQ 259 +NAG N+ SDNGA N G G + SGN+ DE ++QREAALTKFRQKRKERCF K+VRYQSRKKLAEQRPRVRGQFVR+ Sbjct: 627 MNAGGMNMGSDNGAGKNGNGDGSGSGSGSGSGNLADENKISQREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVRK 711
BLAST of CX288843 vs. ExPASy Swiss-Prot
Match: PRR73_ORYSJ (Two-component response regulator-like PRR73 OS=Oryza sativa subsp. japonica GN=PRR73 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 6.629e-19 Identity = 52/95 (54.74%), Postives = 65/95 (68.42%), Query Frame = 2 Query: 11 ALNAGVTNLDSDNGAAGNSGVGGI--TERISGNVVDEVWVAQREAALTKFRQKRKERCFGKRVRYQSRKKLAEQRPRVRGQFVRQLPSDANSGKD 289 A N G N+++ NG +G GG + SGN + + V REAAL KFRQKRK R FGK+VRYQSRK+LAEQRPR+RGQFVRQ + +G+D Sbjct: 670 APNVGRPNMETVNGIVDENGAGGGNGSGSGSGNDLYQNGVCYREAALNKFRQKRKVRNFGKKVRYQSRKRLAEQRPRIRGQFVRQSGQEDQAGQD 764
BLAST of CX288843 vs. ExPASy Swiss-Prot
Match: PRR73_ORYSI (Two-component response regulator-like PRR73 OS=Oryza sativa subsp. indica GN=PRR73 PE=2 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 6.629e-19 Identity = 52/95 (54.74%), Postives = 65/95 (68.42%), Query Frame = 2 Query: 11 ALNAGVTNLDSDNGAAGNSGVGGI--TERISGNVVDEVWVAQREAALTKFRQKRKERCFGKRVRYQSRKKLAEQRPRVRGQFVRQLPSDANSGKD 289 A N G N+++ NG +G GG + SGN + + V REAAL KFRQKRK R FGK+VRYQSRK+LAEQRPR+RGQFVRQ + +G+D Sbjct: 670 APNVGRPNMETVNGIVDENGAGGGNGSGSGSGNDLYQNGVCYREAALNKFRQKRKVRNFGKKVRYQSRKRLAEQRPRIRGQFVRQSGQEDQAGQD 764
BLAST of CX288843 vs. ExPASy Swiss-Prot
Match: PRR37_ORYSJ (Two-component response regulator-like PRR37 OS=Oryza sativa subsp. japonica GN=PRR37 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 8.103e-17 Identity = 55/105 (52.38%), Postives = 66/105 (62.86%), Query Frame = 2 Query: 11 ALNAGVTNLDSDNGAAGNSGVGGITERISGNVVDEVW--VAQRE---AALTKFRQKRKERCFGKRVRYQSRKKLAEQRPRVRGQFVRQLPSD---ANSGKDTASN 301 A+NA N++ NG SG GG SG+ D QRE AA+ KFRQKRKER FGK+VRYQSRK+LAEQRPRVRGQFVRQ D G++ A++ Sbjct: 637 AVNAERPNMEIANGTINKSGPGGGNGSGSGSGNDMYLKRFTQREHRVAAVIKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQAVQDQQQQGGGREAAAD 741
BLAST of CX288843 vs. ExPASy Swiss-Prot
Match: PRR37_ORYSI (Two-component response regulator-like PRR37 OS=Oryza sativa subsp. indica GN=PRR37 PE=2 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 8.103e-17 Identity = 55/105 (52.38%), Postives = 66/105 (62.86%), Query Frame = 2 Query: 11 ALNAGVTNLDSDNGAAGNSGVGGITERISGNVVDEVW--VAQRE---AALTKFRQKRKERCFGKRVRYQSRKKLAEQRPRVRGQFVRQLPSD---ANSGKDTASN 301 A+NA N++ NG SG GG SG+ D QRE AA+ KFRQKRKER FGK+VRYQSRK+LAEQRPRVRGQFVRQ D G++ A++ Sbjct: 637 AVNAERPNMEIANGTINKSGPGGGNGSGSGSGNDMYLKRFTQREHRVAAVIKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQAVQDQQQQGGGREAAAD 741
BLAST of CX288843 vs. ExPASy Swiss-Prot
Match: APRR9_ARATH (Two-component response regulator-like APRR9 OS=Arabidopsis thaliana GN=APRR9 PE=2 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 8.959e-16 Identity = 40/52 (76.92%), Postives = 47/52 (90.38%), Query Frame = 2 Query: 125 AQREAALTKFRQKRKERCFGKRVRYQSRKKLAEQRPRVRGQFVRQLPSDANS 280 +QREAAL KFR KRK+RCF K+VRYQSRKKLAEQRPRV+GQFVR + SDA++ Sbjct: 415 SQREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVRTVNSDAST 466
BLAST of CX288843 vs. ExPASy Swiss-Prot
Match: APRR5_ARATH (Two-component response regulator-like APRR5 OS=Arabidopsis thaliana GN=APRR5 PE=1 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 4.446e-15 Identity = 37/47 (78.72%), Postives = 44/47 (93.62%), Query Frame = 2 Query: 128 QREAALTKFRQKRKERCFGKRVRYQSRKKLAEQRPRVRGQFVRQLPS 268 QREAALTKFR KRK+RC+ K+VRY+SRKKLAEQRPR++GQFVRQ+ S Sbjct: 508 QREAALTKFRMKRKDRCYEKKVRYESRKKLAEQRPRIKGQFVRQVQS 554
BLAST of CX288843 vs. ExPASy Swiss-Prot
Match: PRR95_ORYSJ (Two-component response regulator-like PRR95 OS=Oryza sativa subsp. japonica GN=PRR95 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.764e-14 Identity = 42/60 (70.00%), Postives = 47/60 (78.33%), Query Frame = 2 Query: 95 SGNVVDEV-----WVAQREAALTKFRQKRKERCFGKRVRYQSRKKLAEQRPRVRGQFVRQ 259 S NVV E ++QREAAL KFR KRK+RCF K+VRYQSRK LAEQRPRV+GQFVRQ Sbjct: 557 SSNVVPENPDGLRHLSQREAALNKFRLKRKDRCFEKKVRYQSRKLLAEQRPRVKGQFVRQ 616
BLAST of CX288843 vs. ExPASy Swiss-Prot
Match: APRR3_ARATH (Two-component response regulator-like APRR3 OS=Arabidopsis thaliana GN=APRR3 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 6.420e-14 Identity = 37/55 (67.27%), Postives = 43/55 (78.18%), Query Frame = 2 Query: 125 AQREAALTKFRQKRKERCFGKRVRYQSRKKLAEQRPRVRGQFVRQLPSDANSGKD 289 AQREAAL KFR KRKERCF K+VRY SRKKLAEQRP V+GQF+R+ + +D Sbjct: 440 AQREAALMKFRLKRKERCFEKKVRYHSRKKLAEQRPHVKGQFIRKRDDHKSGSED 494
BLAST of CX288843 vs. ExPASy Swiss-Prot
Match: PRR1_ORYSJ (Two-component response regulator-like PRR1 OS=Oryza sativa subsp. japonica GN=PRR1 PE=2 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 8.385e-14 Identity = 42/68 (61.76%), Postives = 47/68 (69.12%), Query Frame = 2 Query: 128 QREAALTKFRQKRKERCFGKRVRYQSRKKLAEQRPRVRGQFVRQLPSDANSGKDTASNGHTSEDNSSD 331 +R AAL KFR KRKERCF K+VRY +RKKLAE RPRVRGQFVRQ AN T++ SED D Sbjct: 442 RRAAALAKFRLKRKERCFDKKVRYVNRKKLAETRPRVRGQFVRQ----ANYTDITSTGDDISEDEDDD 505 The following BLAST results are available for this feature:
BLAST of CX288843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288843 ID=CX288843; Name=CX288843; organism=Citrus clementina; type=EST; length=619bpback to top |