CX288869
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288869 vs. ExPASy Swiss-Prot
Match: BXDC1_ARATH (Brix domain-containing protein 1 homolog OS=Arabidopsis thaliana GN=At3g23620 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.702e-34 Identity = 70/91 (76.92%), Postives = 80/91 (87.91%), Query Frame = 1 Query: 310 MLKVKTPKNPRVKRALEKRAPKLVETGKKTLILQGTKTSNTLNDVLTELYLLKKGSAIRYTRKNENIRPFESGGETSLEFFSLKTDCSIFI 582 M++++TPK + KR LE RAPKLVETGKKTLIL GTKTS TL+ V+TELY LKKG AIRY+R+NENIRPFESGGETSLEFFS KTDCSIF+ Sbjct: 1 MMEIRTPKTGKAKRVLESRAPKLVETGKKTLILHGTKTSATLSSVMTELYRLKKGGAIRYSRRNENIRPFESGGETSLEFFSQKTDCSIFV 91
BLAST of CX288869 vs. ExPASy Swiss-Prot
Match: BXDC1_ORYSJ (Brix domain-containing protein 1 homolog OS=Oryza sativa subsp. japonica GN=Os01g0513800 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 8.182e-29 Identity = 59/88 (67.05%), Postives = 74/88 (84.09%), Query Frame = 1 Query: 319 VKTPKNPRVKRALEKRAPKLVETGKKTLILQGTKTSNTLNDVLTELYLLKKGSAIRYTRKNENIRPFESGGETSLEFFSLKTDCSIFI 582 ++ P++ R KR L K APKLVETGKKTLIL GTKTS LN VL +L+ LK+ +A++Y++KN+NIRPFESGGETSLEFFSLKTDCS+ + Sbjct: 5 IRVPRSQRAKRELLKHAPKLVETGKKTLILHGTKTSAVLNSVLADLFHLKRDNAVKYSKKNDNIRPFESGGETSLEFFSLKTDCSLIV 92
BLAST of CX288869 vs. ExPASy Swiss-Prot
Match: BXDC1_MOUSE (Brix domain-containing protein 1 OS=Mus musculus GN=Bxdc1 PE=2 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 8.783e-15 Identity = 43/89 (48.31%), Postives = 57/89 (64.04%), Query Frame = 1 Query: 316 KVKTPKNPRVKRALEKRAPKLVETGKKTLILQGTKTSNTLNDVLTELYLLKKGSAIRYTRKNENIRPFESGGETSLEFFSLKTDCSIFI 582 KV PK R KR LEKR PKL E K ++++G + T+ VL ++Y LKK + Y +KN RPFE +TSLEFFS K+DCS+F+ Sbjct: 6 KVLKPKTKRAKRFLEKREPKLTENIKNAMLIKGGNANATVTQVLRDMYALKKPYGVLYKKKNIT-RPFED--QTSLEFFSKKSDCSLFM 91
BLAST of CX288869 vs. ExPASy Swiss-Prot
Match: BXDC1_BOVIN (Brix domain-containing protein 1 OS=Bos taurus GN=BXDC1 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.498e-14 Identity = 43/89 (48.31%), Postives = 58/89 (65.17%), Query Frame = 1 Query: 316 KVKTPKNPRVKRALEKRAPKLVETGKKTLILQGTKTSNTLNDVLTELYLLKKGSAIRYTRKNENIRPFESGGETSLEFFSLKTDCSIFI 582 +V PK R KR LEKR PKL E K ++++G ++T+ VL ++Y LKK I Y +KN RPFE +TSLEFFS K+DCS+F+ Sbjct: 6 RVVKPKTKRAKRFLEKREPKLSENIKNAMLIKGGNANSTVTQVLRDVYALKKPYGILYKKKNIT-RPFED--QTSLEFFSKKSDCSLFM 91
BLAST of CX288869 vs. ExPASy Swiss-Prot
Match: BXDC1_SCHPO (Brix domain-containing protein 1 homolog OS=Schizosaccharomyces pombe GN=SPAC926.08c PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.337e-14 Identity = 44/91 (48.35%), Postives = 58/91 (63.74%), Query Frame = 1 Query: 310 MLKVKTPKNPRVKRALEKRAPKLVETGKKTLILQGTKTSNTLNDVLTELYLLKKGSAIRYTRKNENIRPFESGGETSLEFFSLKTDCSIFI 582 ML+ PKN R KRALEKR PKLVE K + L+G TS DVL +++ LKK ++ + +KN NI PFE +SLEFFS K D ++ + Sbjct: 1 MLRQVKPKNARTKRALEKREPKLVEGAKTAIFLRGNATSQISLDVLGDIHALKKPFSVNFQKKN-NILPFEDA--SSLEFFSEKNDAALAV 88
BLAST of CX288869 vs. ExPASy Swiss-Prot
Match: BXDC1_HUMAN (Brix domain-containing protein 1 OS=Homo sapiens GN=BXDC1 PE=1 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 7.435e-14 Identity = 42/89 (47.19%), Postives = 57/89 (64.04%), Query Frame = 1 Query: 316 KVKTPKNPRVKRALEKRAPKLVETGKKTLILQGTKTSNTLNDVLTELYLLKKGSAIRYTRKNENIRPFESGGETSLEFFSLKTDCSIFI 582 +V PK R KR LEKR PKL E K ++++G + T+ VL ++Y LKK + Y +KN RPFE +TSLEFFS K+DCS+F+ Sbjct: 6 RVVKPKTKRAKRFLEKREPKLNENIKNAMLIKGGNANATVTKVLKDVYALKKPYGVLYKKKNIT-RPFED--QTSLEFFSKKSDCSLFM 91
BLAST of CX288869 vs. ExPASy Swiss-Prot
Match: RPF2_YEAST (Ribosome biogenesis protein RPF2 OS=Saccharomyces cerevisiae GN=RPF2 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.690e-13 Identity = 41/91 (45.05%), Postives = 55/91 (60.44%), Query Frame = 1 Query: 310 MLKVKTPKNPRVKRALEKRAPKLVETGKKTLILQGTKTSNTLNDVLTELYLLKKGSAIRYTRKNENIRPFESGGETSLEFFSLKTDCSIFI 582 M++ PKN R KRAL KR KLVE K+ L + G + L+D++ +L LKK R+ RKN+ I PFE + LEFFS K DCS+ + Sbjct: 1 MIRTVKPKNARAKRALVKREAKLVENVKQALFIPGQSCNKNLHDIMVDLSALKKPDMKRFNRKND-IHPFED--MSPLEFFSEKNDCSLMV 88 The following BLAST results are available for this feature:
BLAST of CX288869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288869 ID=CX288869; Name=CX288869; organism=Citrus clementina; type=EST; length=583bpback to top |