CX288875
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288875 vs. ExPASy Swiss-Prot
Match: CNNM2_RAT (Metal transporter CNNM2 OS=Rattus norvegicus GN=Cnnm2 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 3.531e-17 Identity = 52/136 (38.24%), Postives = 74/136 (54.41%), Query Frame = 2 Query: 26 DLTHDETTIIAGALELTEKTAKDAMTPISKAFSXXXXXXXXXXXXNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLR---KMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELF 424 DL +E II GALEL KT +D MTP+ F + IM G++R+PV+ G +NI+ L+ VK+L VD D PL+ K + V D L +L EF+KG SH+A+V + +N + EG+ F Sbjct: 426 DLVKEELNIIQGALELRTKTVEDVMTPLRDCFMITGEAILDFNTMSEIMESGYTRIPVFEGERSNIVDLLFVKDLAFVDPDDCTPLKTITKFYNHPLHFVFNDTKLDAMLEEFKKGKSHLAIVQR-VNNEGEGDPF 560
BLAST of CX288875 vs. ExPASy Swiss-Prot
Match: CNNM2_MOUSE (Metal transporter CNNM2 OS=Mus musculus GN=Cnnm2 PE=1 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 3.531e-17 Identity = 52/136 (38.24%), Postives = 74/136 (54.41%), Query Frame = 2 Query: 26 DLTHDETTIIAGALELTEKTAKDAMTPISKAFSXXXXXXXXXXXXNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLR---KMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELF 424 DL +E II GALEL KT +D MTP+ F + IM G++R+PV+ G +NI+ L+ VK+L VD D PL+ K + V D L +L EF+KG SH+A+V + +N + EG+ F Sbjct: 426 DLVKEELNIIQGALELRTKTVEDVMTPLRDCFMITGEAILDFNTMSEIMESGYTRIPVFEGERSNIVDLLFVKDLAFVDPDDCTPLKTITKFYNHPLHFVFNDTKLDAMLEEFKKGKSHLAIVQR-VNNEGEGDPF 560
BLAST of CX288875 vs. ExPASy Swiss-Prot
Match: CNNM2_HUMAN (Metal transporter CNNM2 OS=Homo sapiens GN=CNNM2 PE=2 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 3.531e-17 Identity = 52/136 (38.24%), Postives = 74/136 (54.41%), Query Frame = 2 Query: 26 DLTHDETTIIAGALELTEKTAKDAMTPISKAFSXXXXXXXXXXXXNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLR---KMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELF 424 DL +E II GALEL KT +D MTP+ F + IM G++R+PV+ G +NI+ L+ VK+L VD D PL+ K + V D L +L EF+KG SH+A+V + +N + EG+ F Sbjct: 426 DLVKEELNIIQGALELRTKTVEDVMTPLRDCFMITGEAILDFNTMSEIMESGYTRIPVFEGERSNIVDLLFVKDLAFVDPDDCTPLKTITKFYNHPLHFVFNDTKLDAMLEEFKKGKSHLAIVQR-VNNEGEGDPF 560
BLAST of CX288875 vs. ExPASy Swiss-Prot
Match: MAM3_YEAST (Protein MAM3 OS=Saccharomyces cerevisiae GN=MAM3 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.483e-15 Identity = 44/123 (35.77%), Postives = 66/123 (53.66%), Query Frame = 2 Query: 29 LTHDETTIIAGALELTEKTAKDAMTPISKAFSXXXXXXXXXXXXNAIMTMGHSRVPVYSGN-PTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 394 LT DE TII+ L+L K ++ MTPI F+ I G SR+P++ N P N IG++LV+ L+S D D +P+ + +P S + +ILN FQ+G +H+ VV K+ Sbjct: 236 LTKDEVTIISAVLDLKAKRVEEIMTPIENVFTMSADTILDDKTVEKIFNSGFSRIPIFLPNEPNNFIGMLLVRVLISYDPDDCLPISHFPLATLPETSPNTSCLNILNYFQEGKAHMCVVSKE 358
BLAST of CX288875 vs. ExPASy Swiss-Prot
Match: CNNM4_XENTR (Metal transporter CNNM4 OS=Xenopus tropicalis GN=cnnm4 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.530e-15 Identity = 48/135 (35.56%), Postives = 71/135 (52.59%), Query Frame = 2 Query: 29 LTHDETTIIAGALELTEKTAKDAMTPISKAFSXXXXXXXXXXXXNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPL---RKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELF 424 + +E II GALEL KT +D MT + F ++IM G++R+PVY +NI+ ++ VK+L VD D PL + + V D L +L EF+KG SH+A+V K +N + EG+ F Sbjct: 351 IVREEMNIIQGALELRTKTVEDVMTKVEDCFMLPSDAVLDFNTMSSIMESGYTRIPVYENERSNIVDILYVKDLAFVDPDDCTPLSTITRFYSHPLHFVFSDTKLDAVLEEFKKGKSHLAIVQK-VNSEGEGDPF 484
BLAST of CX288875 vs. ExPASy Swiss-Prot
Match: CNNM4_HUMAN (Metal transporter CNNM4 OS=Homo sapiens GN=CNNM4 PE=1 SV=3) HSP 1 Score: 80.4925 bits (197), Expect = 5.637e-15 Identity = 48/136 (35.29%), Postives = 72/136 (52.94%), Query Frame = 2 Query: 26 DLTHDETTIIAGALELTEKTAKDAMTPISKAFSXXXXXXXXXXXXNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLR---KMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELF 424 DL +E +I GALEL KT +D MT + F + IM G++R+PV+ +NI+ ++ VK+L VD D PL+ + + V D L +L EF+KG SH+A+V K +N + EG+ F Sbjct: 353 DLVKEELNMIQGALELRTKTVEDIMTQLQDCFMIRSDAILDFNTMSEIMESGYTRIPVFEDEQSNIVDILYVKDLAFVDPDDCTPLKTITRFYNHPVHFVFHDTKLDAMLEEFKKGKSHLAIVQK-VNNEGEGDPF 487
BLAST of CX288875 vs. ExPASy Swiss-Prot
Match: CNNM4_RAT (Metal transporter CNNM4 OS=Rattus norvegicus GN=Cnnm4 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 7.362e-15 Identity = 48/136 (35.29%), Postives = 72/136 (52.94%), Query Frame = 2 Query: 26 DLTHDETTIIAGALELTEKTAKDAMTPISKAFSXXXXXXXXXXXXNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLR---KMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELF 424 DL +E +I GALEL KT +D MT + F + IM G++R+PV+ +NI+ ++ VK+L VD D PL+ + + V D L +L EF+KG SH+A+V K +N + EG+ F Sbjct: 351 DLVKEELNMIQGALELRTKTVEDIMTQLHDCFMIRSDAILDFNTMSEIMESGYTRIPVFEDEQSNIVDILYVKDLAFVDPDDCTPLKTITRFYNHPVHFVFHDTKLDAMLEEFKKGKSHLAIVQK-VNNEGEGDPF 485
BLAST of CX288875 vs. ExPASy Swiss-Prot
Match: CNNM4_MOUSE (Metal transporter CNNM4 OS=Mus musculus GN=Cnnm4 PE=1 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 7.362e-15 Identity = 48/136 (35.29%), Postives = 72/136 (52.94%), Query Frame = 2 Query: 26 DLTHDETTIIAGALELTEKTAKDAMTPISKAFSXXXXXXXXXXXXNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLR---KMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELF 424 DL +E +I GALEL KT +D MT + F + IM G++R+PV+ +NI+ ++ VK+L VD D PL+ + + V D L +L EF+KG SH+A+V K +N + EG+ F Sbjct: 350 DLVKEELNMIQGALELRTKTVEDIMTQLHDCFMIRSDAILDFNTMSEIMESGYTRIPVFEDEQSNIVDILYVKDLAFVDPDDCTPLKTITRFYNHPVHFVFHDTKLDAMLEEFKKGKSHLAIVQK-VNNEGEGDPF 484
BLAST of CX288875 vs. ExPASy Swiss-Prot
Match: CNNM1_MOUSE (Metal transporter CNNM1 OS=Mus musculus GN=Cnnm1 PE=1 SV=4) HSP 1 Score: 78.9518 bits (193), Expect = 1.640e-14 Identity = 48/137 (35.04%), Postives = 73/137 (53.28%), Query Frame = 2 Query: 26 DLTHDETTIIAGALELTEKTAKDAMTPISKAFSXXXXXXXXXXXXNAIMTMGHSRVPVYSGNPT-NIIGLILVKNLLSVDYRDAVPL---RKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELF 424 DL +E II GALEL K ++ +TP+ F + I+ G++R+PVY G+ NI+ ++ VK+L VD D PL + R + V D L +L EF+KG SH+A+V + +N + EG+ F Sbjct: 338 DLVKEELNIIQGALELRTKVVEEVLTPLGDCFMLRSDAVLDFATVSEILRSGYTRIPVYEGDQRHNIVDILFVKDLAFVDPDDCTPLLTVTRFYNRPLHCVFNDTRLDTVLEEFKKGKSHLAIVQR-VNNEGEGDPF 473
BLAST of CX288875 vs. ExPASy Swiss-Prot
Match: CNNM1_HUMAN (Metal transporter CNNM1 OS=Homo sapiens GN=CNNM1 PE=2 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 1.640e-14 Identity = 48/137 (35.04%), Postives = 73/137 (53.28%), Query Frame = 2 Query: 26 DLTHDETTIIAGALELTEKTAKDAMTPISKAFSXXXXXXXXXXXXNAIMTMGHSRVPVYSGNPT-NIIGLILVKNLLSVDYRDAVPL---RKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELF 424 DL +E II GALEL K ++ +TP+ F + I+ G++R+PVY G+ NI+ ++ VK+L VD D PL + R + V D L +L EF+KG SH+A+V + +N + EG+ F Sbjct: 338 DLVKEELNIIQGALELRTKVVEEVLTPLGDCFMLRSDAVLDFATVSEILRSGYTRIPVYEGDQRHNIVDILFVKDLAFVDPDDCTPLLTVTRFYNRPLHCVFNDTRLDTVLEEFKKGKSHLAIVQR-VNNEGEGDPF 473 The following BLAST results are available for this feature:
BLAST of CX288875 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288875 ID=CX288875; Name=CX288875; organism=Citrus clementina; type=EST; length=537bpback to top |