CX288896
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288896 vs. ExPASy Swiss-Prot
Match: ARA4_ARATH (Ras-related protein ARA-4 OS=Arabidopsis thaliana GN=ARA-4 PE=2 SV=1) HSP 1 Score: 288.886 bits (738), Expect = 8.200e-78 Identity = 143/162 (88.27%), Postives = 155/162 (95.68%), Query Frame = 3 Query: 3 IIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIYSNVS 488 IIGDSAVGKSNLL+RYARNEFNP+SKATIGVEFQTQSM IDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDITR +TF+++ RWLDEL THSDTTVA+ML+GNKCDLESIR VS EEGKSLAE+EGLFFMETSALDSTNVK AFE+VIREIYSN+S Sbjct: 17 IIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKMLIGNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNIS 178
BLAST of CX288896 vs. ExPASy Swiss-Prot
Match: ARA1_ARATH (Ras-related protein ARA-1 OS=Arabidopsis thaliana GN=ARA-1 PE=2 SV=1) HSP 1 Score: 283.108 bits (723), Expect = 4.500e-76 Identity = 141/162 (87.04%), Postives = 154/162 (95.06%), Query Frame = 3 Query: 3 IIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIYSNVS 488 +IGDSAVGKSNLLSRYARNEF+ +SKATIGVEFQTQSMEI+GKEVKAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDITRRTTF+S+ RWLDELK HSDTTVARMLVGNKCDLE+IR VS EEGK+LAE EGLFF+ETSALDSTNVK AFE+VI +IY+NVS Sbjct: 17 VIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVGNKCDLENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVS 178
BLAST of CX288896 vs. ExPASy Swiss-Prot
Match: RGP1_ORYSJ (Ras-related protein RGP1 OS=Oryza sativa subsp. japonica GN=RGP1 PE=2 SV=2) HSP 1 Score: 225.328 bits (573), Expect = 1.113e-58 Identity = 110/162 (67.90%), Postives = 135/162 (83.33%), Query Frame = 3 Query: 3 IIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIYSNVS 488 +IGDSAVGKS LL+R+ARNEFN SKATIGVEFQT+++ ID + VKAQIWDTAGQER+RAVTSAYYRGAVGA++VYDIT+R +FD ++RWL+EL+ H+D + ML+GNK DL ++R V TE+ K AE E LFFMETSAL+STNV+NAF V+ EIY VS Sbjct: 23 LIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDLGTLRVVPTEDAKEFAERENLFFMETSALESTNVENAFMTVLTEIYRIVS 184
BLAST of CX288896 vs. ExPASy Swiss-Prot
Match: RB11E_LOTJA (Ras-related protein Rab11E OS=Lotus japonicus GN=RAB11E PE=2 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 1.454e-58 Identity = 108/162 (66.67%), Postives = 133/162 (82.10%), Query Frame = 3 Query: 3 IIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIYSNVS 488 +IGDS VGKSNLLSR+ RNEFN SK+TIGVEF T+S+ IDGK +KAQIWDTAGQER+RA+TSAYYRGAVGAL+VYD+TR TTF++ RWL EL+ H+D + ML+GNK DL + VSTE+GK+ AE E L+FMETSAL++TNV+NAF V+ +IY VS Sbjct: 18 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIVVMLIGNKSDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVS 179
BLAST of CX288896 vs. ExPASy Swiss-Prot
Match: RIC2_ORYSJ (Ras-related protein RIC2 OS=Oryza sativa subsp. japonica GN=RIC2 PE=2 SV=2) HSP 1 Score: 223.016 bits (567), Expect = 5.526e-58 Identity = 107/162 (66.05%), Postives = 134/162 (82.72%), Query Frame = 3 Query: 3 IIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIYSNVS 488 +IGDS VGKSNLLSR+ RNEF+ SK+TIGVEF T+S+++DGK VKAQIWDTAGQER+RA+TSAYYRGAVGAL+VYD+TR +TF+++ RWL EL+ H+D + MLVGNK DL + V T+EGK+ AE E L+FMETSAL+STNV+NAF V+ +IY VS Sbjct: 19 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVS 180
BLAST of CX288896 vs. ExPASy Swiss-Prot
Match: RB11A_LOTJA (Ras-related protein Rab11A OS=Lotus japonicus GN=RAB11A PE=2 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 5.526e-58 Identity = 107/162 (66.05%), Postives = 137/162 (84.57%), Query Frame = 3 Query: 3 IIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIYSNVS 488 +IGDSAVGKS +L+R+ARNEF+ SK+TIGVEFQT+++ ID K VKAQIWDTAGQER+RAVTSAYYRGAVGA++VYDIT+R TFD I RWL+EL+ H+D + +L+GNKCDL + R+V TE+ K AE EGLFF+ETSAL++TNV++AF V+ EIY+ V+ Sbjct: 22 LIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIGNKCDLVNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTVLTEIYNIVN 183
BLAST of CX288896 vs. ExPASy Swiss-Prot
Match: RB11B_TOBAC (Ras-related protein Rab11B OS=Nicotiana tabacum GN=RAB11B PE=2 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 2.100e-57 Identity = 108/161 (67.08%), Postives = 130/161 (80.75%), Query Frame = 3 Query: 3 IIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIYSNV 485 +IGDS VGKSNLLSR++RNEFN SK+TIGVEF T+S+ +D K VKAQIWDTAGQER+RA+TSAYYRGAVGAL+VYDITR TF+++ RWL EL+ H+D + MLVGNK DL +R VSTE+ K+ AE E FFMETSAL+S NV+NAF V+ EIY V Sbjct: 19 LIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVIMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTEIYKVV 179
BLAST of CX288896 vs. ExPASy Swiss-Prot
Match: RAA1B_ARATH (Ras-related protein RABA1b OS=Arabidopsis thaliana GN=RABA1B PE=2 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 6.110e-57 Identity = 105/158 (66.46%), Postives = 131/158 (82.91%), Query Frame = 3 Query: 3 IIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIY 476 +IGDS VGKSNLLSR+ +NEFN SK+TIGVEF T+++++DGK VKAQIWDTAGQER+RA+TSAYYRGAVGAL+VYD+TRR TF+++ RWL ELK H+D + MLVGNK DL + V TE+GKS AE E L FMETSAL++TNV++AF V+ +IY Sbjct: 18 LIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIY 175
BLAST of CX288896 vs. ExPASy Swiss-Prot
Match: YPT3_NICPL (Ras-related protein YPT3 OS=Nicotiana plumbaginifolia GN=YPT3 PE=2 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 7.979e-57 Identity = 104/162 (64.20%), Postives = 132/162 (81.48%), Query Frame = 3 Query: 3 IIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIYSNVS 488 +IGDS VGKSNLLSR+ +NEFN SK+TIGVEF T+S+ ID K +KAQIWDTAGQER+RA+TSAYYRGAVGAL+VYD+TR T+++++RWL EL+ H+D + ML+GNK DL + VST+E K LAE EGL+FMETSAL++TNV+NAF + +IY VS Sbjct: 18 LIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELRDHTDPNIVVMLIGNKSDLRHLVAVSTDEAKGLAEREGLYFMETSALEATNVENAFTEALTQIYRIVS 179
BLAST of CX288896 vs. ExPASy Swiss-Prot
Match: RB11D_LOTJA (Ras-related protein Rab11D OS=Lotus japonicus GN=RAB11D PE=2 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 7.979e-57 Identity = 105/162 (64.81%), Postives = 132/162 (81.48%), Query Frame = 3 Query: 3 IIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIYSNVS 488 +IGDS VGKSNLLSR+ +NEFN SK+TIGVEF T+++ +D K VKAQIWDTAGQER+RA+TSAYYRGAVGAL+VYD+TRR TF++ +RWL EL+ H+D + ML+GNK DL + V TE+GKS AE E L+FMETSAL++TNV+NAF V+ +IY VS Sbjct: 18 LIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYRIVS 179 The following BLAST results are available for this feature:
BLAST of CX288896 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288896 ID=CX288896; Name=CX288896; organism=Citrus clementina; type=EST; length=488bpback to top |