CX288913
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288913 vs. ExPASy Swiss-Prot
Match: GLYC2_DICDI (Serine hydroxymethyltransferase 2 OS=Dictyostelium discoideum GN=shmt2 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 2.250e-23 Identity = 46/66 (69.70%), Postives = 57/66 (86.36%), Query Frame = 1 Query: 1 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYR 198 YPR+WDY R R +ADK GA LLCDMAHISG+VA ++A +PF +C +VTTTTHK+LRGPRAG+IF+R Sbjct: 212 YPREWDYERMRKIADKHGAYLLCDMAHISGMVAGKQAISPFLFCDVVTTTTHKTLRGPRAGLIFFR 277
BLAST of CX288913 vs. ExPASy Swiss-Prot
Match: GLYC1_DICDI (Serine hydroxymethyltransferase 1 OS=Dictyostelium discoideum GN=shmt1 PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 2.250e-23 Identity = 46/66 (69.70%), Postives = 57/66 (86.36%), Query Frame = 1 Query: 1 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYR 198 YPR+WDY R RA+ADK GA L+CDMAH SGLVAAQ +PF+YC +VT+TTHK+LRGPR+G+IF+R Sbjct: 188 YPREWDYKRMRAIADKVGAYLMCDMAHYSGLVAAQLLDSPFDYCDVVTSTTHKTLRGPRSGIIFFR 253
BLAST of CX288913 vs. ExPASy Swiss-Prot
Match: GLYC_PONAB (Serine hydroxymethyltransferase, cytosolic OS=Pongo abelii GN=SHMT1 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.365e-20 Identity = 46/66 (69.70%), Postives = 54/66 (81.82%), Query Frame = 1 Query: 1 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYR 198 Y R+ DYAR R +AD+ GA L+ DMAHISGLVAA +PFE+CH+VTTTTHK+LRG RAGMIFYR Sbjct: 205 YSRNLDYARLRKIADENGAYLMADMAHISGLVAAGVVPSPFEHCHVVTTTTHKTLRGCRAGMIFYR 270
BLAST of CX288913 vs. ExPASy Swiss-Prot
Match: GLYM_CANGA (Serine hydroxymethyltransferase, mitochondrial OS=Candida glabrata GN=SHM1 PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.783e-20 Identity = 48/66 (72.73%), Postives = 51/66 (77.27%), Query Frame = 1 Query: 1 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYR 198 Y R DYARFR +AD CGA LL DMAHISGLVAA +PFE+ IVTTTTHKSLRGPR MIFYR Sbjct: 207 YSRKLDYARFRKIADGCGAYLLSDMAHISGLVAANVIDSPFEHSDIVTTTTHKSLRGPRGAMIFYR 272
BLAST of CX288913 vs. ExPASy Swiss-Prot
Match: GLYC_MOUSE (Serine hydroxymethyltransferase, cytosolic OS=Mus musculus GN=Shmt1 PE=1 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 2.328e-20 Identity = 46/66 (69.70%), Postives = 53/66 (80.30%), Query Frame = 1 Query: 1 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYR 198 Y R+ DYAR R +AD GA L+ DMAHISGLVAA +PFE+CH+VTTTTHK+LRG RAGMIFYR Sbjct: 199 YSRNLDYARLRKIADDNGAYLMADMAHISGLVAAGVVPSPFEHCHVVTTTTHKTLRGCRAGMIFYR 264
BLAST of CX288913 vs. ExPASy Swiss-Prot
Match: GLYC_HUMAN (Serine hydroxymethyltransferase, cytosolic OS=Homo sapiens GN=SHMT1 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 3.971e-20 Identity = 45/66 (68.18%), Postives = 54/66 (81.82%), Query Frame = 1 Query: 1 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYR 198 Y R+ +YAR R +AD+ GA L+ DMAHISGLVAA +PFE+CH+VTTTTHK+LRG RAGMIFYR Sbjct: 205 YSRNLEYARLRKIADENGAYLMADMAHISGLVAAGVVPSPFEHCHVVTTTTHKTLRGCRAGMIFYR 270
BLAST of CX288913 vs. ExPASy Swiss-Prot
Match: GLYM_ASHGO (Serine hydroxymethyltransferase, mitochondrial OS=Ashbya gossypii GN=SHM1 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 5.187e-20 Identity = 47/66 (71.21%), Postives = 50/66 (75.76%), Query Frame = 1 Query: 1 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYR 198 Y R DY RFR +AD CGA LL DMAH+SGLVAA +PFEY IVTTTTHKSLRGPR MIFYR Sbjct: 220 YARVLDYKRFREIADACGAYLLSDMAHVSGLVAAGVHPSPFEYSDIVTTTTHKSLRGPRGAMIFYR 285
BLAST of CX288913 vs. ExPASy Swiss-Prot
Match: GLYC_SHEEP (Serine hydroxymethyltransferase, cytosolic OS=Ovis aries GN=SHMT1 PE=1 SV=3) HSP 1 Score: 95.9005 bits (237), Expect = 6.774e-20 Identity = 45/66 (68.18%), Postives = 53/66 (80.30%), Query Frame = 1 Query: 1 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYR 198 Y R+ DYAR R +AD GA L+ DMAHISGLVAA +PFE+CH+V+TTTHK+LRG RAGMIFYR Sbjct: 205 YSRNLDYARLRKIADDNGAYLMADMAHISGLVAAGVVPSPFEHCHVVSTTTHKTLRGCRAGMIFYR 270
BLAST of CX288913 vs. ExPASy Swiss-Prot
Match: GLYM_KLULA (Serine hydroxymethyltransferase, mitochondrial OS=Kluyveromyces lactis GN=SHM1 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 8.847e-20 Identity = 46/66 (69.70%), Postives = 50/66 (75.76%), Query Frame = 1 Query: 1 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYR 198 Y R DY RF+ +AD CGA L+ DMAHISGLVAA +PFEY IVTTTTHKSLRGPR MIFYR Sbjct: 221 YSRVLDYKRFKEIADACGAYLMSDMAHISGLVAAGVTRSPFEYSDIVTTTTHKSLRGPRGAMIFYR 286
BLAST of CX288913 vs. ExPASy Swiss-Prot
Match: GLYC_YEAST (Serine hydroxymethyltransferase, cytosolic OS=Saccharomyces cerevisiae GN=SHM2 PE=1 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 8.847e-20 Identity = 49/90 (54.44%), Postives = 57/90 (63.33%), Query Frame = 1 Query: 1 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRXXXXXXXXXXXEGAVKDFEDNNNF 270 Y R DY R R +ADKCGA L+ DMAHISGL+AA +PFEY IVTTTTHKSLRGPR MIF+R + + D E+ NF Sbjct: 196 YCRLIDYKRMREIADKCGAYLMVDMAHISGLIAAGVIPSPFEYADIVTTTTHKSLRGPRGAMIFFRRGVRSINPKTGKEVLYDLENPINF 285 The following BLAST results are available for this feature:
BLAST of CX288913 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288913 ID=CX288913; Name=CX288913; organism=Citrus clementina; type=EST; length=271bpback to top |