CX289103
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX289103 vs. ExPASy Swiss-Prot
Match: APRR5_ARATH (Two-component response regulator-like APRR5 OS=Arabidopsis thaliana GN=APRR5 PE=1 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 4.068e-17 Identity = 39/47 (82.98%), Postives = 46/47 (97.87%), Query Frame = 2 Query: 5 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKN 145 QR+AALTKFR+KRKDRCY+KKVRY+SRK LAEQRPR+KGQFVRQV++ Sbjct: 508 QREAALTKFRMKRKDRCYEKKVRYESRKKLAEQRPRIKGQFVRQVQS 554
BLAST of CX289103 vs. ExPASy Swiss-Prot
Match: APRR9_ARATH (Two-component response regulator-like APRR9 OS=Arabidopsis thaliana GN=APRR9 PE=2 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 5.313e-17 Identity = 41/49 (83.67%), Postives = 45/49 (91.84%), Query Frame = 2 Query: 2 SQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNE 148 SQR+AAL KFRLKRKDRC+DKKVRYQSRK LAEQRPRVKGQFVR V ++ Sbjct: 415 SQREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVRTVNSD 463
BLAST of CX289103 vs. ExPASy Swiss-Prot
Match: PRR95_ORYSJ (Two-component response regulator-like PRR95 OS=Oryza sativa subsp. japonica GN=PRR95 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.637e-16 Identity = 40/45 (88.89%), Postives = 43/45 (95.56%), Query Frame = 2 Query: 2 SQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 136 SQR+AAL KFRLKRKDRC++KKVRYQSRK LAEQRPRVKGQFVRQ Sbjct: 572 SQREAALNKFRLKRKDRCFEKKVRYQSRKLLAEQRPRVKGQFVRQ 616
BLAST of CX289103 vs. ExPASy Swiss-Prot
Match: APRR7_ARATH (Two-component response regulator-like APRR7 OS=Arabidopsis thaliana GN=APRR7 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.232e-15 Identity = 39/52 (75.00%), Postives = 44/52 (84.62%), Query Frame = 2 Query: 2 SQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKD 157 SQR+AALTKFR KRK+RC+ KKVRYQSRK LAEQRPRV+GQFVR+ T D Sbjct: 667 SQREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVRKTAAATDD 718
BLAST of CX289103 vs. ExPASy Swiss-Prot
Match: APRR3_ARATH (Two-component response regulator-like APRR3 OS=Arabidopsis thaliana GN=APRR3 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.210e-14 Identity = 36/56 (64.29%), Postives = 47/56 (83.93%), Query Frame = 2 Query: 2 SQRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDANAD 169 +QR+AAL KFRLKRK+RC++KKVRY SRK LAEQRP VKGQF+R+ +++ K + D Sbjct: 440 AQREAALMKFRLKRKERCFEKKVRYHSRKKLAEQRPHVKGQFIRK-RDDHKSGSED 494
BLAST of CX289103 vs. ExPASy Swiss-Prot
Match: PRR1_ORYSJ (Two-component response regulator-like PRR1 OS=Oryza sativa subsp. japonica GN=PRR1 PE=2 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 6.079e-13 Identity = 34/44 (77.27%), Postives = 39/44 (88.64%), Query Frame = 2 Query: 5 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 136 +R AAL KFRLKRK+RC+DKKVRY +RK LAE RPRV+GQFVRQ Sbjct: 442 RRAAALAKFRLKRKERCFDKKVRYVNRKKLAETRPRVRGQFVRQ 485
BLAST of CX289103 vs. ExPASy Swiss-Prot
Match: APRR1_ARATH (Two-component response regulator-like APRR1 OS=Arabidopsis thaliana GN=APRR1 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.146e-12 Identity = 32/53 (60.38%), Postives = 40/53 (75.47%), Query Frame = 2 Query: 5 QRDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNETKDAN 163 +R+ AL KFR KR RC+DKK+RY +RK LAE+RPRVKGQFVR++ D N Sbjct: 532 RREEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFVRKMNGVNVDLN 584
BLAST of CX289103 vs. ExPASy Swiss-Prot
Match: PRR73_ORYSJ (Two-component response regulator-like PRR73 OS=Oryza sativa subsp. japonica GN=PRR73 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.497e-11 Identity = 34/47 (72.34%), Postives = 38/47 (80.85%), Query Frame = 2 Query: 8 RDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNE 148 R+AAL KFR KRK R + KKVRYQSRK LAEQRPR++GQFVRQ E Sbjct: 712 REAALNKFRQKRKVRNFGKKVRYQSRKRLAEQRPRIRGQFVRQSGQE 758
BLAST of CX289103 vs. ExPASy Swiss-Prot
Match: PRR73_ORYSI (Two-component response regulator-like PRR73 OS=Oryza sativa subsp. indica GN=PRR73 PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 1.497e-11 Identity = 34/47 (72.34%), Postives = 38/47 (80.85%), Query Frame = 2 Query: 8 RDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQVKNE 148 R+AAL KFR KRK R + KKVRYQSRK LAEQRPR++GQFVRQ E Sbjct: 712 REAALNKFRQKRKVRNFGKKVRYQSRKRLAEQRPRIRGQFVRQSGQE 758
BLAST of CX289103 vs. ExPASy Swiss-Prot
Match: PRR37_ORYSJ (Two-component response regulator-like PRR37 OS=Oryza sativa subsp. japonica GN=PRR37 PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.357e-11 Identity = 33/43 (76.74%), Postives = 37/43 (86.05%), Query Frame = 2 Query: 8 RDAALTKFRLKRKDRCYDKKVRYQSRKSLAEQRPRVKGQFVRQ 136 R AA+ KFR KRK+R + KKVRYQSRK LAEQRPRV+GQFVRQ Sbjct: 682 RVAAVIKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 724 The following BLAST results are available for this feature:
BLAST of CX289103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289103 ID=CX289103; Name=CX289103; organism=Citrus clementina; type=EST; length=340bpback to top |