CX289112
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX289112 vs. ExPASy Swiss-Prot
Match: TLP5_ORYSJ (Tubby-like F-box protein 5 OS=Oryza sativa subsp. japonica GN=TULP5 PE=2 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 3.852e-49 Identity = 98/151 (64.90%), Postives = 107/151 (70.86%), Query Frame = 2 Query: 2 YELNVLRTRGPRRMNCIMDTIPFSSIEEGGAAPTPTSFAQSFDELFFSFTSLKGKEP-ITYXXXXXXXXXXXXXXXXXQPLALKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVAAVEPSHNVPLAEQEKVILQFGKIGKDIFTMDYHY 451 YEL VLR RGPRRM C M +IP I+EGG APTPT S DE + ++ KGKEP I + PL LKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVA+V+PS +P AEQEKVILQFGKIGKDIFTMDY Y Sbjct: 256 YELTVLRNRGPRRMQCTMHSIPALCIQEGGKAPTPTGIIHSLDEQVPALSTSKGKEPAIEFSSTSLSADLSGPVCTNEVPLVLKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVASVDPSLGIPAAEQEKVILQFGKIGKDIFTMDYRY 406
BLAST of CX289112 vs. ExPASy Swiss-Prot
Match: TLP6_ARATH (Tubby-like F-box protein 6 OS=Arabidopsis thaliana GN=TULP6 PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 5.042e-41 Identity = 88/153 (57.52%), Postives = 101/153 (66.01%), Query Frame = 2 Query: 2 YELNVLRTRGPRRMNCIMDTIPFSSIEEGGAAPTPTSFAQSFDELFFSFTSLKGKEPITYXXXXXXXXXXXXXXXXXQPLALKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVAAVE---PSHNVPLAEQEKVILQFGKIGKDIFTMDYHY 451 YELNVLRTRGPRRM CIM +IP S+I+EGG +PT F K K+P+ +PL LKNK+PRWHEQLQCWCLNF+GRVTVASVKNFQLVAA + N+P EQ++VILQFGKIGKDIFTMDY Y Sbjct: 252 YELNVLRTRGPRRMQCIMHSIPISAIQEGGKIQSPTEFTNQ---------GKKKKKPLM----DFCSGNLGGESVIKEPLILKNKSPRWHEQLQCWCLNFKGRVTVASVKNFQLVAAAAEAGKNMNIPEEEQDRVILQFGKIGKDIFTMDYRY 391
BLAST of CX289112 vs. ExPASy Swiss-Prot
Match: TLP6_ORYSJ (Tubby-like F-box protein 6 OS=Oryza sativa subsp. japonica GN=TULP6 PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 8.601e-41 Identity = 90/151 (59.60%), Postives = 102/151 (67.55%), Query Frame = 2 Query: 2 YELNVLRTRGPRRMNCIMDTIPFSSIEEGGAAPTPTSFAQSFDELFFSFTSLKGKEPITYXXXXXXXXXXXXXXXXXQPLALKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVAAVEPSHNVPL-AEQEKVILQFGKIGKDIFTMDYHY 451 YELNVL RGPRRMNCIMD+IP S+++EGG APT T F S + F S + + K + L LKNK+PRWHEQLQCWCLNFRGRVTVASVKNFQLVA+ E N P EQ+KVILQFGKIGKD+FTMDY Y Sbjct: 240 YELNVLGARGPRRMNCIMDSIPTSAVQEGGKAPTQTEFPLSGLDSFPSISFFRSKSA------RIDSATSQLSTQKEEKLVLKNKSPRWHEQLQCWCLNFRGRVTVASVKNFQLVASDE---NGPTNQEQDKVILQFGKIGKDLFTMDYRY 381
BLAST of CX289112 vs. ExPASy Swiss-Prot
Match: TLP2_ARATH (Tubby-like F-box protein 2 OS=Arabidopsis thaliana GN=TULP2 PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 1.242e-39 Identity = 89/150 (59.33%), Postives = 100/150 (66.67%), Query Frame = 2 Query: 2 YELNVLRTRGPRRMNCIMDTIPFSSIEEGGAAPTPTSFAQSFDELFFSFTSLKGKEPITYXXXXXXXXXXXXXXXXXQPLALKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVAAVEPSHNVPLAEQEKVILQFGKIGKDIFTMDYHY 451 YELNVLRTRGPRRM+C MD+IP SS+ A P S Q +E S S KG+ T QPL LKNK+PRWHEQLQCWCLNF+GRVTVASVKNFQLVA ++ S + P E E+VILQFGKIGKDIFTMDY Y Sbjct: 233 YELNVLRTRGPRRMHCAMDSIPLSSVI---AEP---SVVQGIEEEVSSSPSPKGETITT-----DKEIPDNSPSLRDQPLVLKNKSPRWHEQLQCWCLNFKGRVTVASVKNFQLVAEIDASLDAPPEEHERVILQFGKIGKDIFTMDYRY 371
BLAST of CX289112 vs. ExPASy Swiss-Prot
Match: TLP11_ORYSJ (Tubby-like F-box protein 11 OS=Oryza sativa subsp. japonica GN=TULP11 PE=2 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 2.767e-39 Identity = 85/150 (56.67%), Postives = 96/150 (64.00%), Query Frame = 2 Query: 2 YELNVLRTRGPRRMNCIMDTIPFSSIEEGGAAPTPTSFAQSFDELFFSFTSLKGKEPITYXXXXXXXXXXXXXXXXXQPLALKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVAAVEPSHNVPLAEQEKVILQFGKIGKDIFTMDYHY 451 YELNVL +RGPRRM+C MD+IP S+IE+GG APT T F S+ E F S K K L LKNK+PRWHE LQCWCLNF GRVTVASVKNFQLVA+ E N E + VILQFGK+GKD+FTMDY Y Sbjct: 243 YELNVLGSRGPRRMHCAMDSIPVSAIEQGGTAPTQTEFPLSYHESFTSIPFFKSKS------VRANNSTASLLTQNGSKLVLKNKSPRWHEHLQCWCLNFHGRVTVASVKNFQLVASDE--SNPTNQEHDDVILQFGKVGKDMFTMDYRY 384
BLAST of CX289112 vs. ExPASy Swiss-Prot
Match: TLP3_ARATH (Tubby-like F-box protein 3 OS=Arabidopsis thaliana GN=TULP3 PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 3.614e-39 Identity = 86/150 (57.33%), Postives = 95/150 (63.33%), Query Frame = 2 Query: 2 YELNVLRTRGPRRMNCIMDTIPFSSIEEGGAAPTPTSFAQSFDELFFSFTSLKGKEPITYXXXXXXXXXXXXXXXXXQPLALKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVAAVEPSHNVPLAEQEKVILQFGKIGKDIFTMDYHY 451 YELNVL +RGPRRM C+MD IP S++E GG APT T S + F SF+ + K L LKNKAPRWHEQLQCWCLNF GRVTVASVKNFQLVAA E P E E VILQFGK+GKD+FTMDY Y Sbjct: 241 YELNVLGSRGPRRMQCVMDAIPASAVEPGGTAPTQTELVHSNLDSFPSFSFFRSKS----IRAESLPSGPSSAAQKEGLLVLKNKAPRWHEQLQCWCLNFNGRVTVASVKNFQLVAAPENGPAGP--EHENVILQFGKVGKDVFTMDYQY 384
BLAST of CX289112 vs. ExPASy Swiss-Prot
Match: TLP14_ORYSJ (Tubby-like F-box protein 14 OS=Oryza sativa subsp. japonica GN=TULP14 PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 5.218e-38 Identity = 89/175 (50.86%), Postives = 104/175 (59.43%), Query Frame = 2 Query: 2 YELNVLRTRGPRRMNCIMDTIPFSSIEEGGAAPT-PTS-FAQSFDELFFS--------------FTSLKGKEPITYXXXXXXXXXXXXXXXXXQPLALKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVAAVEPSHNVPLAEQ---------EKVILQFGKIGKDIFTMDYHY 451 YELNVL TRGPRRMNC+M +IP SS+E GG P P S A+S DE F S F+S + + +PL L+NKAPRWHEQLQCWCLNF+GRVTVASVKNFQLVAA +P+ P Q +KVILQFGK+ KD+FTMDY Y Sbjct: 249 YELNVLGTRGPRRMNCVMHSIPASSLEAGGTVPCQPDSVLARSLDESFGSISFSKSSIMDRSIRFSSSRYSDISVGGPMVGGQALGDSDESKERPLILRNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAATQPAAGAPTPSQPAPPPPPDHDKVILQFGKVAKDMFTMDYRY 423
BLAST of CX289112 vs. ExPASy Swiss-Prot
Match: TLP10_ARATH (Tubby-like F-box protein 10 OS=Arabidopsis thaliana GN=TULP10 PE=1 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 7.535e-37 Identity = 90/180 (50.00%), Postives = 104/180 (57.78%), Query Frame = 2 Query: 2 YELNVLRTRGPRRMNCIMDTIPFSSIEEGGAAPTPT------------------SFAQS-FDELFFSFTSLKGKEPITYXXXXXXXXXXXXXXXXXQPLALKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVAAVEPSHNVPLA-----------EQEKVILQFGKIGKDIFTMDYHY 451 YELNVL TRGPRRM+CIM++IP SS+E GG+ P SF++S FD F+S + E +PL LKNK PRWHEQLQCWCLNFRGRVTVASVKNFQLVAA +P A EQ+KVILQFGK+GKD+FTMDY Y Sbjct: 251 YELNVLGTRGPRRMHCIMNSIPISSLEPGGSVPNQPEKLVPAPYSLDDSFRSNISFSKSSFDHRSLDFSSSRFSE-------MGISCDDNEEEASFRPLILKNKQPRWHEQLQCWCLNFRGRVTVASVKNFQLVAARQPQPQGTGAAAAPTSAPAHPEQDKVILQFGKVGKDMFTMDYRY 423
BLAST of CX289112 vs. ExPASy Swiss-Prot
Match: TLP13_ORYSJ (Tubby-like F-box protein 13 OS=Oryza sativa subsp. japonica GN=TULP13 PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 8.331e-36 Identity = 85/177 (48.02%), Postives = 99/177 (55.93%), Query Frame = 2 Query: 2 YELNVLRTRGPRRMNCIMDTIPFSSIEEGGAAPT-PTSF-AQSFDELFFSFTSLKGKEPITYXXXXXXXXXXXXXXXXXQ----------------PLALKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVAAVEPSHNVPL---------AEQEKVILQFGKIGKDIFTMDYHY 451 YELNV TRGPRRM C+M +IP SS+E GG P+ P S A S +E F S + + PL L+NKAPRWHEQLQCWCLNFRGRVTVASVKNFQL+AA +P+ P E +KVILQFGK+ KD+FTMDYHY Sbjct: 242 YELNVFGTRGPRRMCCLMHSIPASSLEAGGTVPSQPDSILAHSLNESSFRSVSFSKSSVMDHSMHFSSAQFSDISIGDGPRIGGRVLSDDEECKETPLILQNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLIAATQPAAGAPTPSQPVPPPPPEHDKVILQFGKVAKDMFTMDYHY 418
BLAST of CX289112 vs. ExPASy Swiss-Prot
Match: TLP8_ORYSJ (Tubby-like F-box protein 8 OS=Oryza sativa subsp. japonica GN=TULP8 PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 1.088e-35 Identity = 83/175 (47.43%), Postives = 102/175 (58.29%), Query Frame = 2 Query: 2 YELNVLRTRGPRRMNCIMDTIPFSSIEEGGAAP------TPTSFAQSFD-----------ELFFSFTSLKGKEPITYXXXXXXXXXXXXXXXXXQ-PLALKNKAPRWHEQLQCWCLNFRGRVTVASVKNFQLVAA-VEPSHNVPL------AEQEKVILQFGKIGKDIFTMDYHY 451 YELNVL TRGPRRM+C+M +IP SS+E GG P P +F +SF + F+S + + + PL L+NKAPRWHEQLQCWCLNFRGRVT+ASVKNFQL+AA +P P EQ+K+ILQFGK+ KD+FTMDY Y Sbjct: 249 YELNVLGTRGPRRMHCVMHSIPASSVEPGGIVPGQPEQIVPRAFEESFRSTTSFSKSSIMDRSMDFSSSRDFSSARFSDIAGGTINGDEEGQNKERPLVLRNKAPRWHEQLQCWCLNFRGRVTIASVKNFQLIAAPAQPPAGAPTPSQPAPPEQDKIILQFGKVAKDMFTMDYRY 423 The following BLAST results are available for this feature:
BLAST of CX289112 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289112 ID=CX289112; Name=CX289112; organism=Citrus clementina; type=EST; length=453bpback to top |