CX289132

Overview
NameCX289132
Unique NameCX289132
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length543
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14930 contig Ccv1_Contig14930:84..626. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX289132 vs. ExPASy Swiss-Prot
Match: TRC_DROME (Serine/threonine-protein kinase tricorner OS=Drosophila melanogaster GN=trc PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.074e-13
Identity = 42/114 (36.84%), Postives = 64/114 (56.14%), Query Frame = 2
Query:  197 AAREFDLDPDVSVSSPVTRQKAAAAKQFIENHYKNYLQGLQDRKEXXXXXXXXXXXXXVSNEEQEEMLRNLERRETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTG 538
            ++R  D D      S  T  KA  AK  +EN+Y N +    +RK+             +S  +++E      ++ETEY+RL+R ++G++DFE L +IG+GAFGEVRL + K TG
Sbjct:    3 SSRTQDADGASIRFSDHTLDKATKAKVTLENYYSNLVTQYGERKQRLAKLEAQLKDESLSEAQRQEKRLQHAQKETEYLRLKRLRLGVEDFEALKVIGRGAFGEVRLVQKKDTG 116          
BLAST of CX289132 vs. ExPASy Swiss-Prot
Match: ST38L_HUMAN (Serine/threonine-protein kinase 38-like OS=Homo sapiens GN=STK38L PE=1 SV=3)

HSP 1 Score: 75.485 bits (184), Expect = 1.832e-13
Identity = 37/97 (38.14%), Postives = 59/97 (60.82%), Query Frame = 2
Query:  248 TRQKAAAAKQFIENHYKNYLQGLQDRKEXXXXXXXXXXXXXVSNEEQEEMLRNLERRETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTG 538
            TR++   AK  +EN Y N +   ++R+              +++EE++       R+ETE++RL+R ++G+DDFE L +IG+GAFGEVRL + K TG
Sbjct:   17 TRERVTVAKLTLENFYSNLILQHEERETRQKKLEVAMEEEGLADEEKKLRRSQHARKETEFLRLKRTRLGLDDFESLKVIGRGAFGEVRLVQKKDTG 113          
BLAST of CX289132 vs. ExPASy Swiss-Prot
Match: TRC_DROPS (Serine/threonine-protein kinase tricorner OS=Drosophila pseudoobscura pseudoobscura GN=trc PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.393e-13
Identity = 37/97 (38.14%), Postives = 58/97 (59.79%), Query Frame = 2
Query:  248 TRQKAAAAKQFIENHYKNYLQGLQDRKEXXXXXXXXXXXXXVSNEEQEEMLRNLERRETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTG 538
            T  KA  AK  +EN+Y N +    +RK+             ++  +++E      ++ETEY+RL+R ++G++DFE L +IG+GAFGEVRL + K TG
Sbjct:   19 TLDKATKAKVTLENYYSNLVTQYGERKQRLAKLEAQLKDESLTESQRQEKRLQHAQKETEYLRLKRLRLGVEDFEALKVIGRGAFGEVRLVQKKDTG 115          
BLAST of CX289132 vs. ExPASy Swiss-Prot
Match: ST38L_MOUSE (Serine/threonine-protein kinase 38-like OS=Mus musculus GN=Stk38l PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 9.092e-13
Identity = 36/97 (37.11%), Postives = 58/97 (59.79%), Query Frame = 2
Query:  248 TRQKAAAAKQFIENHYKNYLQGLQDRKEXXXXXXXXXXXXXVSNEEQEEMLRNLERRETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTG 538
            TR++   AK  +EN Y N +   ++R+              +++EE++       R+ETE++RL+R ++G+DDFE L +I +GAFGEVRL + K TG
Sbjct:   17 TRERVTVAKLTLENFYSNLILQHEERETRQKKLEVAMEEEGLADEEKKLRRSQHARKETEFLRLKRTRLGLDDFESLKVIARGAFGEVRLVQKKDTG 113          
BLAST of CX289132 vs. ExPASy Swiss-Prot
Match: CBK1_CANGA (Serine/threonine-protein kinase CBK1 OS=Candida glabrata GN=CBK1 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.551e-12
Identity = 39/111 (35.14%), Postives = 64/111 (57.66%), Query Frame = 2
Query:  209 FDLDPDVSVSSPVTRQKAAAAKQFIENHYKNYLQGLQDRKEXXXXXXXXXXXXXVSNEEQEEMLRNLERRETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGE 541
            F+  PD+   S  T+ KAAA K  +EN+Y+  ++   +R E              S E     L +L ++E++++RL+R ++ ++DF  + +IGKGAFGEVRL + K TG+
Sbjct:  286 FERRPDLLSKS--TQDKAAAVKLKVENYYQQSVKYAIERNERRVELETELGSHNWSEERNARQLASLGKKESQFLRLRRTRLSLEDFHTVQVIGKGAFGEVRLVQKKDTGK 394          
BLAST of CX289132 vs. ExPASy Swiss-Prot
Match: CBK1_YEAST (Serine/threonine-protein kinase CBK1 OS=Saccharomyces cerevisiae GN=CBK1 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.025e-12
Identity = 39/111 (35.14%), Postives = 64/111 (57.66%), Query Frame = 2
Query:  209 FDLDPDVSVSSPVTRQKAAAAKQFIENHYKNYLQGLQDRKEXXXXXXXXXXXXXVSNEEQEEMLRNLERRETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGE 541
            F+  PD+      T+ KAAA K  IEN Y++ ++   +R E              S E +   L +L ++E++++RL+R ++ ++DF  + +IGKGAFGEVRL + K TG+
Sbjct:  268 FERRPDLLTKG--TQDKAAAVKLKIENFYQSSVKYAIERNERRVELETELTSHNWSEERKSRQLSSLGKKESQFLRLRRTRLSLEDFHTVKVIGKGAFGEVRLVQKKDTGK 376          
BLAST of CX289132 vs. ExPASy Swiss-Prot
Match: CBK1_KLULA (Serine/threonine-protein kinase CBK1 OS=Kluyveromyces lactis GN=CBK1 PE=3 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 2.025e-12
Identity = 39/111 (35.14%), Postives = 64/111 (57.66%), Query Frame = 2
Query:  209 FDLDPDVSVSSPVTRQKAAAAKQFIENHYKNYLQGLQDRKEXXXXXXXXXXXXXVSNEEQEEMLRNLERRETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGE 541
            F+  PD+   +  T+ KAAA K  IEN Y++ +    +R +              S E +   L +L ++E++++RL+R ++ +DDF  + +IGKGAFGEVRL + K TG+
Sbjct:  219 FERRPDLLTKT--TQDKAAAVKLKIENFYQSSVGYAIERNQRRLELESELASQDWSEERKNRQLASLGKKESQFLRLRRTRLSLDDFNSVKVIGKGAFGEVRLVQKKDTGK 327          
BLAST of CX289132 vs. ExPASy Swiss-Prot
Match: SAX1_CAEEL (Serine/threonine-protein kinase sax-1 OS=Caenorhabditis elegans GN=sax-1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.893e-12
Identity = 36/109 (33.03%), Postives = 64/109 (58.72%), Query Frame = 2
Query:  212 DLDPDVSVSSPVTRQKAAAAKQFIENHYKNYLQGLQDRKEXXXXXXXXXXXXXVSNEEQEEMLRNLERRETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTG 538
            ++ P++ +S   T+ KA+  +  IE++Y   +    +R+              +S+EE+EE  +    +ET+Y+RL+R ++ ++DFE L +IG+GAFGEVRL +   TG
Sbjct:    3 EIAPEMEISQ-YTKDKASCTRISIESYYSKRVTQCAERENRLKKLEEDISARGLSDEEKEEKRKIHHSKETDYLRLKRTRLTVNDFESLKVIGRGAFGEVRLVQKHDTG 110          
BLAST of CX289132 vs. ExPASy Swiss-Prot
Match: SAX1_CAEBR (Serine/threonine-protein kinase sax-1 OS=Caenorhabditis briggsae GN=sax-1 PE=3 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 5.893e-12
Identity = 36/109 (33.03%), Postives = 64/109 (58.72%), Query Frame = 2
Query:  212 DLDPDVSVSSPVTRQKAAAAKQFIENHYKNYLQGLQDRKEXXXXXXXXXXXXXVSNEEQEEMLRNLERRETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTG 538
            D+ P+V +S   T+ KA+  +  IE++Y   +    +R+              +S++E++E  +    +ET+Y+RL+R ++ ++DFE L +IG+GAFGEVRL +   TG
Sbjct:    3 DVAPEVEISQ-YTKDKASCTRISIESYYSKRVTQCAERENRLKKLEEDMSARGLSDDEKDEKRKIHHSKETDYLRLKRTRLTVNDFESLKVIGRGAFGEVRLVQKHDTG 110          
BLAST of CX289132 vs. ExPASy Swiss-Prot
Match: CBK1_ASHGO (Serine/threonine-protein kinase CBK1 OS=Ashbya gossypii GN=CBK1 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.893e-12
Identity = 35/101 (34.65%), Postives = 60/101 (59.41%), Query Frame = 2
Query:  239 SPVTRQKAAAAKQFIENHYKNYLQGLQDRKEXXXXXXXXXXXXXVSNEEQEEMLRNLERRETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGE 541
            S  T++KAAA K  +EN Y++ +    +R +              S E +   L +L ++E++++RL+R ++ ++DF  + +IGKGAFGEVRL + K TG+
Sbjct:  234 SKSTQEKAAAVKLKVENFYQSSVNHAIERNQRRVELESQLLSHGWSEERKNRQLSSLGKKESQFLRLRRTRLSLEDFHTVKVIGKGAFGEVRLVQKKDTGK 334          
The following BLAST results are available for this feature:
BLAST of CX289132 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
TRC_DROME1.074e-1336.84Serine/threonine-protein kinase tricorner OS=Droso... [more]
ST38L_HUMAN1.832e-1338.14Serine/threonine-protein kinase 38-like OS=Homo sa... [more]
TRC_DROPS2.393e-1338.14Serine/threonine-protein kinase tricorner OS=Droso... [more]
ST38L_MOUSE9.092e-1337.11Serine/threonine-protein kinase 38-like OS=Mus mus... [more]
CBK1_CANGA1.551e-1235.14Serine/threonine-protein kinase CBK1 OS=Candida gl... [more]
CBK1_YEAST2.025e-1235.14Serine/threonine-protein kinase CBK1 OS=Saccharomy... [more]
CBK1_KLULA2.025e-1235.14Serine/threonine-protein kinase CBK1 OS=Kluyveromy... [more]
SAX1_CAEEL5.893e-1233.03Serine/threonine-protein kinase sax-1 OS=Caenorhab... [more]
SAX1_CAEBR5.893e-1233.03Serine/threonine-protein kinase sax-1 OS=Caenorhab... [more]
CBK1_ASHGO5.893e-1234.65Serine/threonine-protein kinase CBK1 OS=Ashbya gos... [more]

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Properties
Property NameValue
Genbank descriptionC02009E07SK IF1 Citrus clementina cDNA clone C02009E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289132 ID=CX289132; Name=CX289132; organism=Citrus clementina; type=EST; length=543bp
GGCTTTCTTTCAGTCATTTTCACAAACACAGACTGACACTGACTCCTAAG
ATCTCTCCTCGAAACTCTTCGCTTCCTCCTAAGCTTTGCAGCAAATGTAT
CTCTGATTTAGGATAATTGCAAAAACTGATCTGATTTCGGCGAAAATGGA
CGGTCGTGATGATACGGTTAGATTAGGTGCTCTAAACTTGAAGCCGGCTG
CTCGTGAATTCGATTTGGATCCAGATGTGTCCGTTTCATCGCCGGTGACG
AGACAGAAAGCCGCTGCCGCAAAGCAGTTCATTGAGAATCATTACAAGAA
CTACTTGCAAGGATTGCAAGATCGTAAAGAGAGGCGTAGAGCCCTTCAAA
TGAGAGCACAACAAGCTGCGGTCTCAAATGAGGAACAAGAGGAGATGCTG
AGGAATTTAGAGCGCAGAGAAACTGAATATATGAGGCTGCAGAGGCGTAA
AATTGGGATTGATGACTTTGAGCAATTAACTTTAATTGGAAAAGGTGCAT
TTGGTGAGGTCAGGTTATGTCGTGCTAAAACTACTGGAGAGAT
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