CX289138
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX289138 vs. ExPASy Swiss-Prot
Match: PHG1B_DICDI (Putative phagocytic receptor 1b OS=Dictyostelium discoideum GN=phg1b PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 1.971e-39 Identity = 79/164 (48.17%), Postives = 95/164 (57.93%), Query Frame = 2 Query: 2 FCGPLFLTFCFLNTVAIAYNATAALPFGXXXXXXXXXXXXXSPLLVLGGIAGKNSKAEFQAPCRTTKYPREIPPLPWYRSAIPQMAMAGFLPFSAIYIELYYIFASVWGHRIYXXXXXXXXXXXXXXXXXXXXXXALTYFQLAAEDHEWWWRSFLCGGSTGAFI 493 F PLF+ NTVAI +++T ALP PL V+GGIAG+ F+APCRT +PRE+PP+ WYR Q+ +AGFLPFSAIYIEL+YIF SVWGH Y ALTYFQL+ EDH+WWW SF+ GGST FI Sbjct: 364 FVAPLFIVVILSNTVAITWHSTVALPILTMIEVITIWLFVGFPLTVVGGIAGRRLSENFEAPCRTKNFPREVPPIQWYRRLPCQILIAGFLPFSAIYIELFYIFNSVWGHSTYTLYGILCLVFLILINVTVCITVALTYFQLSMEDHKWWWNSFINGGSTVVFI 527
BLAST of CX289138 vs. ExPASy Swiss-Prot
Match: TM9S1_PONAB (Transmembrane 9 superfamily member 1 OS=Pongo abelii GN=TM9SF1 PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 8.283e-38 Identity = 82/180 (45.56%), Postives = 97/180 (53.89%), Query Frame = 2 Query: 2 FCGPLFLTFCFLNTVAIAYNATAALPFGXXXXXXXXXXXXXSPLLVLGGIAGKNSKAEFQAPCRTTKYPREIPPLPWYRSAIPQMAMAGFLPFSAIYIELYYIFASVWGHRIYXXXXXXXXXXXXXXXXXXXXXXALTYFQLAAEDHEWWWRSFLCGGSTGAFIXXXXXXXXXXRSDMSG 541 F P FLT+ +N+V A +T ALP PL V+GGI GKN+ + F APCRT REIPP PWY+S + M + GFLPFSAI +ELYYIFA+VWG Y ALTYFQL+ ED+ WWWRS L GSTG FI RS+MSG Sbjct: 383 FSVPFFLTWSVVNSVHWANGSTQALPATTILLLLTVWLLVGFPLTVIGGIFGKNNASPFDAPCRTKNIAREIPPQPWYKSTVIHMTVGGFLPFSAISVELYYIFATVWGREQYTLYGILFFVFAILLSVGACISIALTYFQLSGEDYRWWWRSVLSVGSTGLFIFLYSVFYYARRSNMSG 562
BLAST of CX289138 vs. ExPASy Swiss-Prot
Match: TM9S1_MOUSE (Transmembrane 9 superfamily member 1 OS=Mus musculus GN=Tm9sf1 PE=2 SV=2) HSP 1 Score: 156.377 bits (394), Expect = 8.283e-38 Identity = 82/180 (45.56%), Postives = 97/180 (53.89%), Query Frame = 2 Query: 2 FCGPLFLTFCFLNTVAIAYNATAALPFGXXXXXXXXXXXXXSPLLVLGGIAGKNSKAEFQAPCRTTKYPREIPPLPWYRSAIPQMAMAGFLPFSAIYIELYYIFASVWGHRIYXXXXXXXXXXXXXXXXXXXXXXALTYFQLAAEDHEWWWRSFLCGGSTGAFIXXXXXXXXXXRSDMSG 541 F P FLT+ +N+V A +T ALP PL V+GGI GKN+ + F APCRT REIPP PWY+S + M + GFLPFSAI +ELYYIFA+VWG Y ALTYFQL+ ED+ WWWRS L GSTG FI RS+MSG Sbjct: 383 FSVPFFLTWSVVNSVHWANGSTQALPATTILLLLTVWLLVGFPLTVIGGIFGKNNASPFDAPCRTKNIAREIPPQPWYKSTVIHMTVGGFLPFSAISVELYYIFATVWGREQYTLYGILFFVFAILLSVGACISIALTYFQLSGEDYRWWWRSVLSVGSTGLFIFLYSVFYYARRSNMSG 562
BLAST of CX289138 vs. ExPASy Swiss-Prot
Match: TM9S1_HUMAN (Transmembrane 9 superfamily member 1 OS=Homo sapiens GN=TM9SF1 PE=2 SV=2) HSP 1 Score: 156.377 bits (394), Expect = 8.283e-38 Identity = 82/180 (45.56%), Postives = 97/180 (53.89%), Query Frame = 2 Query: 2 FCGPLFLTFCFLNTVAIAYNATAALPFGXXXXXXXXXXXXXSPLLVLGGIAGKNSKAEFQAPCRTTKYPREIPPLPWYRSAIPQMAMAGFLPFSAIYIELYYIFASVWGHRIYXXXXXXXXXXXXXXXXXXXXXXALTYFQLAAEDHEWWWRSFLCGGSTGAFIXXXXXXXXXXRSDMSG 541 F P FLT+ +N+V A +T ALP PL V+GGI GKN+ + F APCRT REIPP PWY+S + M + GFLPFSAI +ELYYIFA+VWG Y ALTYFQL+ ED+ WWWRS L GSTG FI RS+MSG Sbjct: 383 FSVPFFLTWSVVNSVHWANGSTQALPATTILLLLTVWLLVGFPLTVIGGIFGKNNASPFDAPCRTKNIAREIPPQPWYKSTVIHMTVGGFLPFSAISVELYYIFATVWGREQYTLYGILFFVFAILLSVGACISIALTYFQLSGEDYRWWWRSVLSVGSTGLFIFLYSVFYYARRSNMSG 562
BLAST of CX289138 vs. ExPASy Swiss-Prot
Match: TM9S1_BOVIN (Transmembrane 9 superfamily member 1 OS=Bos taurus GN=TM9SF1 PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 8.283e-38 Identity = 82/180 (45.56%), Postives = 97/180 (53.89%), Query Frame = 2 Query: 2 FCGPLFLTFCFLNTVAIAYNATAALPFGXXXXXXXXXXXXXSPLLVLGGIAGKNSKAEFQAPCRTTKYPREIPPLPWYRSAIPQMAMAGFLPFSAIYIELYYIFASVWGHRIYXXXXXXXXXXXXXXXXXXXXXXALTYFQLAAEDHEWWWRSFLCGGSTGAFIXXXXXXXXXXRSDMSG 541 F P FLT+ +N+V A +T ALP PL V+GGI GKN+ + F APCRT REIPP PWY+S + M + GFLPFSAI +ELYYIFA+VWG Y ALTYFQL+ ED+ WWWRS L GSTG FI RS+MSG Sbjct: 383 FSVPFFLTWSVVNSVHWANGSTQALPATTILLLLTVWLLVGFPLTVIGGIFGKNNASPFDAPCRTKNIAREIPPQPWYKSTLVHMTVGGFLPFSAISVELYYIFATVWGREQYTLYGILFFVFAILLSVGACISIALTYFQLSGEDYRWWWRSVLSVGSTGLFIFLYSVFYYARRSNMSG 562
BLAST of CX289138 vs. ExPASy Swiss-Prot
Match: TM9S1_RAT (Transmembrane 9 superfamily member 1 OS=Rattus norvegicus GN=Tm9sf1 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 2.953e-27 Identity = 72/180 (40.00%), Postives = 84/180 (46.67%), Query Frame = 2 Query: 2 FCGPLFLTFCFLNTVAIAYNATAALPFGXXXXXXXXXXXXXSPLLVLGGIAGKNSKAEFQAPCRTTKYPREIPPLPWYRSAIPQMAMAGFLPFSAIYIELYYIFASVWGHRIYXXXXXXXXXXXXXXXXXXXXXXALTYFQLAAEDHEWWWRSFLCGGSTGAFIXXXXXXXXXXRSDMSG 541 F P FLT+ +N+V A +T ALP PL V+GGI GKN+ + F APCRT REIPP P AI +ELYYIFA+VWG Y ALTYFQL+ ED+ WWWRS L GSTG FI RS+MSG Sbjct: 383 FSVPFFLTWSVVNSVHWANGSTQALPVTTILLLLTVWLLVGFPLTVIGGIFGKNNASPFDAPCRTKNIAREIPPQP-----------------CAISVELYYIFATVWGREQYTLYGILFFVFAILLSVGACISIALTYFQLSGEDYRWWWRSVLSVGSTGLFIFLYSVFYYARRSNMSG 545
BLAST of CX289138 vs. ExPASy Swiss-Prot
Match: TM9S3_MOUSE (Transmembrane 9 superfamily member 3 OS=Mus musculus GN=Tm9sf3 PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 3.378e-23 Identity = 57/179 (31.84%), Postives = 80/179 (44.69%), Query Frame = 2 Query: 5 CGPLFLTFCFLNTVAIAYNATAALPFGXXXXXXXXXXXXXSPLLVLGGIAGKNSKAEFQAPCRTTKYPREIPPLPWYRSAIPQMAMAGFLPFSAIYIELYYIFASVWGHRIYXXXXXXXXXXXXXXXXXXXXXXALTYFQLAAEDHEWWWRSFLCGGSTGAFIXXXXXXXXXXRSDMSG 541 CG F F+N +AI Y+A+ A+PFG PL ++G I G+N + PCR PR IP W+ + + G LPF +I+IE+Y+IF S W ++IY TYF L AED+ W W SFL ST ++ ++ M G Sbjct: 369 CGTAF----FINFIAIYYHASRAIPFGTMVAVCCICFFVILPLNLVGTILGRNLSGQPNFPCRVNAVPRPIPEKKWFMEPAVIVCLGGILPFGSIFIEMYFIFTSFWAYKIYYVYGFMMLVLVILCIVTVCVTIVCTYFLLNAEDYRWQWTSFLSAASTAIYVYMYSFYYYFFKTKMYG 543
BLAST of CX289138 vs. ExPASy Swiss-Prot
Match: TM9S3_HUMAN (Transmembrane 9 superfamily member 3 OS=Homo sapiens GN=TM9SF3 PE=1 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 3.378e-23 Identity = 57/179 (31.84%), Postives = 80/179 (44.69%), Query Frame = 2 Query: 5 CGPLFLTFCFLNTVAIAYNATAALPFGXXXXXXXXXXXXXSPLLVLGGIAGKNSKAEFQAPCRTTKYPREIPPLPWYRSAIPQMAMAGFLPFSAIYIELYYIFASVWGHRIYXXXXXXXXXXXXXXXXXXXXXXALTYFQLAAEDHEWWWRSFLCGGSTGAFIXXXXXXXXXXRSDMSG 541 CG F F+N +AI Y+A+ A+PFG PL ++G I G+N + PCR PR IP W+ + + G LPF +I+IE+Y+IF S W ++IY TYF L AED+ W W SFL ST ++ ++ M G Sbjct: 371 CGTAF----FINFIAIYYHASRAIPFGTMVAVCCICFFVILPLNLVGTILGRNLSGQPNFPCRVNAVPRPIPEKKWFMEPAVIVCLGGILPFGSIFIEMYFIFTSFWAYKIYYVYGFMMLVLVILCIVTVCVTIVCTYFLLNAEDYRWQWTSFLSAASTAIYVYMYSFYYYFFKTKMYG 545
BLAST of CX289138 vs. ExPASy Swiss-Prot
Match: PHG1A_DICDI (Putative phagocytic receptor 1a OS=Dictyostelium discoideum GN=phg1a PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.087e-21 Identity = 53/162 (32.72%), Postives = 77/162 (47.53%), Query Frame = 2 Query: 8 GPLFLTFCFLNTVAIAYNATAALPFGXXXXXXXXXXXXXSPLLVLGGIAGKNSKAEFQAPCRTTKYPREIPPLPWYRSAIPQMAMAGFLPFSAIYIELYYIFASVWGHRIYXXXXXXXXXXXXXXXXXXXXXXALTYFQLAAEDHEWWWRSFLCGGSTGAFI 493 G +F F F+N ++AA+PFG PL+ LG + K + P RT + PR++P WY + + M G LPF A++IEL++I S+W ++ Y + YFQL AEDH WWWRSFL GS+ ++ Sbjct: 422 GIIFGIFFFVNMFLRGAKSSAAVPFGTFASIIAMWFGISVPLVFLGSYFA-SKKPVPEDPVRTNQIPRQVPDQIWYMNPYLSILMGGILPFGAVFIELHFILTSLWDNQFYYIFGFLFIVLMILIVTSAEISIVMCYFQLCAEDHHWWWRSFLTAGSSSLYM 582
BLAST of CX289138 vs. ExPASy Swiss-Prot
Match: TM9S2_RAT (Transmembrane 9 superfamily member 2 OS=Rattus norvegicus GN=Tm9sf2 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 2.677e-20 Identity = 51/161 (31.68%), Postives = 73/161 (45.34%), Query Frame = 2 Query: 8 GPLFLTFCFLNTVAIAYNATAALPFGXXXXXXXXXXXXXSPLLVLGGIAGKNSKAEFQAPCRTTKYPREIPPLPWYRSAIPQMAMAGFLPFSAIYIELYYIFASVWGHRIYXXXXXXXXXXXXXXXXXXXXXXALTYFQLAAEDHEWWWRSFLCGGSTGAF 490 G +F F +N + ++AA+PFG PL +G G A + P RT + PR+IP +Y +P + M G LPF I+I+L++I S+W H++Y L YF L AED+ W WRSFL G T + Sbjct: 443 GIVFADFFIMNLILWGEGSSAAIPFGTLVAILALWFCISVPLTFIGAYFGFKKNA-IEHPVRTNQIPRQIPEQSFYTKPLPGIIMGGILPFGCIFIQLFFILNSIWSHQMYYMFGFLFLVFIILVITCSEATILLCYFHLCAEDYHWQWRSFLTSGFTAVY 602 The following BLAST results are available for this feature:
BLAST of CX289138 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289138 ID=CX289138; Name=CX289138; organism=Citrus clementina; type=EST; length=545bpback to top |