CX289196

Overview
NameCX289196
Unique NameCX289196
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length575
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289196 vs. ExPASy Swiss-Prot
Match: ASOL_BRANA (L-ascorbate oxidase homolog OS=Brassica napus GN=Bp10 PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 8.105e-50
Identity = 102/189 (53.97%), Postives = 125/189 (66.14%), Query Frame = 2
Query:    8 PDGLVINGR-----GSNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQVLSATSVLHYXXXXXXXXXXXXXXXTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVS 559
            PDG+VING+     GS+A  FT+  GKTYR RI NVG+ TSINFRIQ HKM LVE+EG+H LQN YDSLD+H+GQ +  +V A+Q P+ YY+V S+RF   V++ T +L Y                    WSL Q RS R NLTAS  RPNPQGSYHYG IN T TI+L NT   ++GK R+A+N VS
Sbjct:  189 PDGIVINGKSGKGDGSDAPLFTLKPGKTYRVRICNVGVKTSINFRIQNHKMKLVEMEGSHVLQNDYDSLDVHVGQCFGTIVTANQEPKDYYMVASSRFLKTVITTTGLLRYEGGKGPASSQLPAGPVGWA-WSLNQFRSFRWNLTASAARPNPQGSYHYGKINITRTIKLVNTQGKVDGKLRFALNGVS 376          
BLAST of CX289196 vs. ExPASy Swiss-Prot
Match: ASOL_TOBAC (L-ascorbate oxidase homolog OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 2.607e-48
Identity = 94/192 (48.96%), Postives = 125/192 (65.10%), Query Frame = 2
Query:    8 PDGLVINGRGSNANT-----FTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYIVISTRFTSQVLSATSVLHY---XXXXXXXXXXXXXXXTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVS 559
            PDG++ING+ +         FT++ GKTYR+R  N+G+ +S+N R QGH M LVE+EG+HT+QN YDSLD+H+GQ  SVLV ADQ P+ YY+V+S+RF  Q LS+ +++ Y                  T  I WS+ Q RS R NLTAS  RPNPQGSYHYG IN T TI++ N+   + GK RY +N +S
Sbjct:  187 PDGIIINGKSAKVGEAKEPLFTMEAGKTYRYRFCNLGMRSSVNIRFQGHPMKLVELEGSHTVQNIYDSLDLHVGQCLSVLVTADQEPKDYYLVVSSRFLKQALSSVAIIRYANGKGPASPELPTPPPENTEGIAWSMNQFRSFRWNLTASAARPNPQGSYHYGQINITRTIKIFNSMSQVGGKLRYGLNGIS 378          
BLAST of CX289196 vs. ExPASy Swiss-Prot
Match: SKU5_ARATH (Monocopper oxidase-like protein SKU5 OS=Arabidopsis thaliana GN=SKU5 PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 3.413e-40
Identity = 94/205 (45.85%), Postives = 123/205 (60.00%), Query Frame = 2
Query:    8 PDGLVINGRGS------------NANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQ-PPQGYYIVISTRFTSQVL----SATSVLHYXXXXXXXXXXXXXXXTTQID--WSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAP-TINGKQRYAVNSVSF 562
            PDG++ING+G             +  T TV  GKTYR R+SNVGISTS+NFRIQGH ++L E EG++T+Q  Y SLDIH+GQSYS LV  DQ     YYIV S R  ++ +    +   +L Y                 + D  +S+ QARS+R N++ASG RPNPQGS+ YG IN T    L+N  P TI+GK+R  +N +SF
Sbjct:  186 PDGVLINGKGPYRYNDTLVADGIDFETITVHPGKTYRLRVSNVGISTSLNFRIQGHNLVLAESEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASSDYYIVASARVVNETIWRRVTGVGILKYTNSKGKAKGQLPPGPQDEFDKTFSMNQARSIRWNVSASGARPNPQGSFKYGSINVTDVYVLRNMPPVTISGKRRTTLNGISF 390          
BLAST of CX289196 vs. ExPASy Swiss-Prot
Match: SKS2_ARATH (Monocopper oxidase-like protein SKS2 OS=Arabidopsis thaliana GN=SKS2 PE=1 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 7.603e-40
Identity = 93/205 (45.37%), Postives = 120/205 (58.54%), Query Frame = 2
Query:    8 PDGLVINGRGS-----------NANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQ-PPQGYYIVISTRFTS----QVLSATSVLHYXXXXXXXXXXXXXXXT-TQIDWS-LEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPT-INGKQRYAVNSVSFI 565
            PDG++ING+G               T  VD GKTYR R+ NVGISTS+NFRIQ HK+LL+E EG +T Q  +   D+H+GQSYS LV  DQ     YYIV S RF +    Q ++   +LHY               T     WS + Q R++++N +ASG RPNPQGS+HYG IN T T  L++  PT INGK R  +N +SF+
Sbjct:  189 PDGVLINGKGPFKYNSSVPDGIEHETVNVDPGKTYRIRVHNVGISTSLNFRIQNHKLLLIETEGRYTSQMNFTDFDVHVGQSYSFLVTMDQNATSDYYIVASARFVNETVWQRVTGVGILHYSNSKGPASGPLPVSATDVNHPWSAMNQPRAIKQNTSASGARPNPQGSFHYGQINITRTYILRSLPPTKINGKLRATLNGISFV 393          
BLAST of CX289196 vs. ExPASy Swiss-Prot
Match: SKS1_ARATH (Monocopper oxidase-like protein SKS1 OS=Arabidopsis thaliana GN=SKS1 PE=1 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 6.437e-39
Identity = 93/205 (45.37%), Postives = 124/205 (60.49%), Query Frame = 2
Query:    8 PDGLVINGRGS---NAN--------TFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQ-PPQGYYIVISTRFTS----QVLSATSVLHYXXXXXXXXXXXXXXXT-TQIDWS-LEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPT-INGKQRYAVNSVSFI 565
            PDG++ING+G    N++        TF V+ GKTYR R+ NVGISTS+NFRIQ H +LLVE EG +T Q  +   D+H+GQSYS LV  DQ     YYIV S RF +    Q ++  ++LHY               T     WS + Q +++R+N +ASG RPNPQGS+HYG IN T+T  L++  PT ING  R  +N +SF+
Sbjct:  190 PDGVLINGKGPYKYNSSVPDGIDYLTFHVEPGKTYRIRVHNVGISTSLNFRIQNHSLLLVETEGHYTSQANFTDFDVHVGQSYSFLVTMDQDATSDYYIVASARFVNETVWQRVTGVAILHYSNSKGPVSGPLPVPKTDVSSPWSAMSQPKTIRQNTSASGARPNPQGSFHYGQINITNTYILRSLPPTIINGALRATLNGISFV 394          
BLAST of CX289196 vs. ExPASy Swiss-Prot
Match: ASO_CUCPM (L-ascorbate oxidase OS=Cucurbita pepo var. melopepo PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.011e-12
Identity = 49/171 (28.65%), Postives = 80/171 (46.78%), Query Frame = 2
Query:   53 FTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQ-PPQGYYIVISTRFT-SQVLSATSVLHYXXXXXXXXXXXXXXXTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVS 559
            F V   KTYR RI++     ++NF I  H++L+VE +G +        +DI+ G+SYSVL+  DQ P + Y++ + TR          ++L+Y               T   D   +++++    +TA+   P P        +     I L NT   ING  ++A+N VS
Sbjct:  206 FHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLTLLNYLPNSVSKLPTSPPPQTPAWD-DFDRSKNFTYRITAAMGSPKPP-------VKFNRRIFLLNTQNVINGYVKWAINDVS 368          
BLAST of CX289196 vs. ExPASy Swiss-Prot
Match: ASO_CUCMA (L-ascorbate oxidase OS=Cucurbita maxima GN=AAO PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 6.707e-12
Identity = 49/171 (28.65%), Postives = 80/171 (46.78%), Query Frame = 2
Query:   53 FTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQ-PPQGYYIVISTRFT-SQVLSATSVLHYXXXXXXXXXXXXXXXTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVS 559
            F V   KTYR RI++     ++NF I  H +L+VE +G +        +DI+ G+SYSVL+  DQ P + Y++ + TR          ++L+Y               T   D   +++++    +TA+   P P        + +   I L NT   ING  ++A+N VS
Sbjct:  236 FHVMPKKTYRIRIASTTALAALNFAIGNHPLLVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRGRHPNTPPGLTLLNYLPNSVSKLPTSPPPETPAWD-DFDRSKNFTYRITAAMGSPKPP-------VKSNRRIFLLNTQNVINGYVKWAINDVS 398          
BLAST of CX289196 vs. ExPASy Swiss-Prot
Match: LAC2_THACU (Laccase-2 OS=Thanatephorus cucumeris GN=LCC2 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.494e-11
Identity = 38/101 (37.62%), Postives = 49/101 (48.51%), Query Frame = 2
Query:    8 PDGLVINGRGS--------------NANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYI 268
            PD   ING+G               N  T  V +GK YR RI N     S  F +QGHK  ++E +G  T     D+ DI  GQ YS +++ADQ P  Y+I
Sbjct:  188 PDSGTINGKGKYDPASANTNNTTLENLYTLKVKRGKRYRLRIINASAIASFRFGVQGHKCTIIEADGVLTKPIEVDAFDILAGQRYSCILKADQDPDSYWI 288          
BLAST of CX289196 vs. ExPASy Swiss-Prot
Match: LAC5_TRAVI (Laccase-5 OS=Trametes villosa GN=LCC5 PE=3 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 3.329e-11
Identity = 35/96 (36.46%), Postives = 51/96 (53.12%), Query Frame = 2
Query:    8 PDGLVINGRG---------SNANTFTVDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPPQGYYI 268
            PD ++ING G         +N    TV QGK YRFR+ ++    +  F I GH M ++EV+G +      DS+ I  GQ YS ++ A+Q    Y+I
Sbjct:  189 PDSVLINGLGRFSGDGGGATNLTVITVTQGKRYRFRLVSISCDPNFTFSIDGHNMTIIEVDGVNHEALDVDSIQIFAGQRYSFILNANQSIDNYWI 284          
BLAST of CX289196 vs. ExPASy Swiss-Prot
Match: ASO_CUCSA (L-ascorbate oxidase OS=Cucumis sativus PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.348e-11
Identity = 48/169 (28.40%), Postives = 80/169 (47.34%), Query Frame = 2
Query:   59 VDQGKTYRFRISNVGISTSINFRIQGHKMLLVEVEGTHTLQNTYDSLDIHLGQSYSVLVRADQPP-QGYYIVISTRF-TSQVLSATSVLHYXXXXXXXXXXXXXXXTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNTAPTINGKQRYAVNSVS 559
            V   KTYR RI++     S+NF I  H++L+VE +G +        +DI+ G+SYSVL+  DQ P + Y++ I  R    +     ++L+Y               T   +   +++++    + A+   P P   Y+  L        L NT   ING  ++A+N+VS
Sbjct:  243 VQPKKTYRIRIASTTALASLNFAIGNHELLVVEADGNYVQPFVTSDIDIYSGESYSVLITTDQNPLENYWVSIGVRARLPKTPPGLTLLNYLPNSASKLPISPPPETPHWE-DFDRSKNFTFRIFAAMGSPKPPVRYNRRLF-------LLNTQNRINGFMKWAINNVS 403          
The following BLAST results are available for this feature:
BLAST of CX289196 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
ASOL_BRANA8.105e-5053.97L-ascorbate oxidase homolog OS=Brassica napus GN=B... [more]
ASOL_TOBAC2.607e-4848.96L-ascorbate oxidase homolog OS=Nicotiana tabacum P... [more]
SKU5_ARATH3.413e-4045.85Monocopper oxidase-like protein SKU5 OS=Arabidopsi... [more]
SKS2_ARATH7.603e-4045.37Monocopper oxidase-like protein SKS2 OS=Arabidopsi... [more]
SKS1_ARATH6.437e-3945.37Monocopper oxidase-like protein SKS1 OS=Arabidopsi... [more]
ASO_CUCPM3.011e-1228.65L-ascorbate oxidase OS=Cucurbita pepo var. melopep... [more]
ASO_CUCMA6.707e-1228.65L-ascorbate oxidase OS=Cucurbita maxima GN=AAO PE=... [more]
LAC2_THACU1.494e-1137.62Laccase-2 OS=Thanatephorus cucumeris GN=LCC2 PE=2 ... [more]
LAC5_TRAVI3.329e-1136.46Laccase-5 OS=Trametes villosa GN=LCC5 PE=3 SV=2[more]
ASO_CUCSA4.348e-1128.40L-ascorbate oxidase OS=Cucumis sativus PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC02010C08SK IF1 Citrus clementina cDNA clone C02010C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289196 ID=CX289196; Name=CX289196; organism=Citrus clementina; type=EST; length=575bp
TCCCTTTCCTGATGGTCTTGTTATCAATGGTCGGGGTTCAAATGCTAACA
CATTCACAGTTGATCAAGGCAAGACCTACCGGTTCCGGATATCAAATGTG
GGGATTTCAACTTCAATCAATTTTAGAATCCAGGGTCATAAAATGCTGCT
TGTAGAGGTCGAAGGAACCCACACATTGCAGAACACTTATGATTCTCTTG
ATATCCATTTGGGACAGTCCTACTCTGTTCTGGTTAGAGCTGATCAACCC
CCTCAAGGTTACTACATTGTCATCTCAACACGTTTCACATCACAGGTGCT
TTCTGCAACCTCCGTTCTTCATTACAGTAACTCAGCTGGCAGTGTTTCTG
GTCCTCCTCCTGGTGGGCCAACAACTCAGATTGATTGGTCTCTTGAACAA
GCACGTTCACTCAGGCGGAATCTGACAGCAAGTGGACCAAGACCTAATCC
CCAAGGCTCATACCACTATGGTCTGATCAACACTACACATACTATTAGAC
TCCAAAACACTGCCCCAACTATCAATGGCAAGCAGAGGTATGCTGTCAAC
AGCGTGTCATTCATCCCAGCTGACA
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