CX289226
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289226 vs. ExPASy Swiss-Prot
Match: SNWA_DICDI (Protein snwA OS=Dictyostelium discoideum GN=snwA PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.011e-16 Identity = 45/79 (56.96%), Postives = 54/79 (68.35%), Query Frame = 1 Query: 157 AMGKKSKITRDRDRDISEKFALGMASTGAARGGEVMYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPK 393 A GKKSK RD+DRDISEK ALG AS R + +YDQRLFNQ + + SGF DD YNVY K LF + +++YRPK Sbjct: 539 ASGKKSKFNRDQDRDISEKIALGQASI--KRTEDSIYDQRLFNQSESLTSGFGNDDSYNVYSKPLFGGAVS-NSIYRPK 614
BLAST of CX289226 vs. ExPASy Swiss-Prot
Match: BX42_DROME (Puff-specific protein Bx42 OS=Drosophila melanogaster GN=Bx42 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.223e-15 Identity = 40/81 (49.38%), Postives = 55/81 (67.90%), Query Frame = 1 Query: 154 AAMGKKSKITRDRDRDISEKFALGMASTGAARGGEVMYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKK 396 AA K+SK+ ++R+RDISE+ ALG+ + A G E ++DQRLFN KGMDSG+ D+ YNVYDK + + +YRP K Sbjct: 382 AAPEKRSKLQKERERDISEQIALGLPAKSAGNG-ETLFDQRLFNTTKGMDSGYGDDEAYNVYDKPWRDSNTLGAHIYRPSK 461
BLAST of CX289226 vs. ExPASy Swiss-Prot
Match: SNW1_PONAB (SNW domain-containing protein 1 OS=Pongo abelii GN=SNW1 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.475e-14 Identity = 42/83 (50.60%), Postives = 54/83 (65.06%), Query Frame = 1 Query: 154 AAMGKKSKITRDRDRDISEKFALGMASTGAARGGEVMYDQRLFNQEKGMDSGFA--TDDQYNVYDKGLFTAQPTLSTLYRPKK 396 AA K+SK+ R+ +RDISE ALG+ + + EV YDQRLFNQ KGMDSGFA D+ YNVYD+ + ++YRP K Sbjct: 372 AAPDKRSKLQRNENRDISEVIALGVPNPRTSN--EVQYDQRLFNQSKGMDSGFAGGEDEIYNVYDQAWRGGKDMAQSIYRPSK 452
BLAST of CX289226 vs. ExPASy Swiss-Prot
Match: SNW1_MOUSE (SNW domain-containing protein 1 OS=Mus musculus GN=Snw1 PE=1 SV=3) HSP 1 Score: 76.2554 bits (186), Expect = 5.475e-14 Identity = 42/83 (50.60%), Postives = 54/83 (65.06%), Query Frame = 1 Query: 154 AAMGKKSKITRDRDRDISEKFALGMASTGAARGGEVMYDQRLFNQEKGMDSGFA--TDDQYNVYDKGLFTAQPTLSTLYRPKK 396 AA K+SK+ R+ +RDISE ALG+ + + EV YDQRLFNQ KGMDSGFA D+ YNVYD+ + ++YRP K Sbjct: 372 AAPDKRSKLQRNENRDISEVIALGVPNPRTSN--EVQYDQRLFNQSKGMDSGFAGGEDEIYNVYDQAWRGGKDMAQSIYRPSK 452
BLAST of CX289226 vs. ExPASy Swiss-Prot
Match: SNW1_HUMAN (SNW domain-containing protein 1 OS=Homo sapiens GN=SNW1 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.475e-14 Identity = 42/83 (50.60%), Postives = 54/83 (65.06%), Query Frame = 1 Query: 154 AAMGKKSKITRDRDRDISEKFALGMASTGAARGGEVMYDQRLFNQEKGMDSGFA--TDDQYNVYDKGLFTAQPTLSTLYRPKK 396 AA K+SK+ R+ +RDISE ALG+ + + EV YDQRLFNQ KGMDSGFA D+ YNVYD+ + ++YRP K Sbjct: 372 AAPDKRSKLQRNENRDISEVIALGVPNPRTSN--EVQYDQRLFNQSKGMDSGFAGGEDEIYNVYDQAWRGGKDMAQSIYRPSK 452
BLAST of CX289226 vs. ExPASy Swiss-Prot
Match: SNW1_BOVIN (SNW domain-containing protein 1 OS=Bos taurus GN=SNW1 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.151e-14 Identity = 42/83 (50.60%), Postives = 53/83 (63.86%), Query Frame = 1 Query: 154 AAMGKKSKITRDRDRDISEKFALGMASTGAARGGEVMYDQRLFNQEKGMDSGFA--TDDQYNVYDKGLFTAQPTLSTLYRPKK 396 AA K+SK+ R+ +RDISE ALG+ + + EV YDQRLFNQ KGMDSGFA D+ YNVYD+ + +YRP K Sbjct: 372 AAPDKRSKLQRNENRDISEVIALGVPNPRTSN--EVQYDQRLFNQSKGMDSGFAGGEDEIYNVYDQAWRGGKDMAQNIYRPSK 452
BLAST of CX289226 vs. ExPASy Swiss-Prot
Match: YGH1_CAEEL (Uncharacterized protein T27F2.1 OS=Caenorhabditis elegans GN=T27F2.1 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.349e-12 Identity = 34/77 (44.16%), Postives = 45/77 (58.44%), Query Frame = 1 Query: 166 KKSKITRDRDRDISEKFALGMASTGAARGGEVMYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKK 396 K K+ ++R+RDISEK LG+ T R GE +DQRLF++ +G+DSG DD YN YD +YRP K Sbjct: 379 KADKLRKERERDISEKIVLGLPDTNQKRTGEPQFDQRLFDKTQGLDSGAMDDDTYNPYDAAWRGGDSVQQHVYRPSK 455
BLAST of CX289226 vs. ExPASy Swiss-Prot
Match: PRP45_EMENI (Pre-mRNA-processing protein 45 OS=Emericella nidulans GN=prp45 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.125e-12 Identity = 38/85 (44.71%), Postives = 54/85 (63.53%), Query Frame = 1 Query: 148 KDAAMGKKSKI---TRDRDRDISEKFALGMASTGAARGGEVMYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPK 393 + + MG + +I R+++RDISEK ALG+A + E M+D RLFNQ G+ +GF D N YDK LF AQ ++++YRPK Sbjct: 405 RQSRMGTERRIQAMAREQNRDISEKVALGLAKP--TQSSETMWDSRLFNQTSGLSTGFNED---NPYDKPLFAAQDAINSIYRPK 484
BLAST of CX289226 vs. ExPASy Swiss-Prot
Match: PRP45_ASPFU (Pre-mRNA-processing protein 45 OS=Aspergillus fumigatus GN=prp45 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.491e-11 Identity = 38/85 (44.71%), Postives = 54/85 (63.53%), Query Frame = 1 Query: 148 KDAAMGKKSKI---TRDRDRDISEKFALGMASTGAARGGEVMYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPK 393 + + MG + +I R+++RDISEK ALG+A + E M+D RLFNQ G+ SGF D N YDK LF AQ ++++YRP+ Sbjct: 405 RQSRMGTERRIQMMAREQNRDISEKVALGLAKP--TQTSESMWDSRLFNQTSGLQSGFNED---NPYDKPLFAAQDAINSIYRPR 484
BLAST of CX289226 vs. ExPASy Swiss-Prot
Match: PRP45_CRYNE (Pre-mRNA-processing protein 45 OS=Cryptococcus neoformans GN=PRP45 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.543e-11 Identity = 32/71 (45.07%), Postives = 48/71 (67.61%), Query Frame = 1 Query: 178 ITRDRDRDISEKFALGMASTGAARGGEVMYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRP 390 + ++ +RDISEK ALG+A A++ E + D RLFN+E + +GFA++D YN+YDK LF + +YRP Sbjct: 430 LAKEANRDISEKIALGLAKPSASK--ETLLDSRLFNRE-ALSTGFASEDSYNLYDKPLFAGSSAAAAIYRP 497 The following BLAST results are available for this feature:
BLAST of CX289226 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289226 ID=CX289226; Name=CX289226; organism=Citrus clementina; type=EST; length=397bpback to top |