CX289241

Overview
NameCX289241
Unique NameCX289241
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length418
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289241 vs. ExPASy Swiss-Prot
Match: APG2_ARATH (GDSL esterase/lipase APG OS=Arabidopsis thaliana GN=APG PE=1 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 8.412e-47
Identity = 87/138 (63.04%), Postives = 107/138 (77.54%), Query Frame = 2
Query:    5 AIYIVGAGSGDFLQNYYAKPSLNKVYTPEQYSSMLVKSFSSFIKNLYGLGARKFGVTSLPPLGCFPAARILFGNHGRGCVSRINIAAQQFNKKVNSSASNLQKQLPGLKIVIFDIFKPLFELVQSPSKFGFVEATRSC 418
            AI ++ AGS DF+QNYY  P L KVYT + Y S L+ +FS+FIK +Y +GARK GVTSLPP GC PAAR LFG H +GCVSR+N  AQ FNKK+N++AS LQKQ   LKIV+FDI+ PL++LVQ+PSK GF EAT+ C
Sbjct:  160 AICLLSAGSSDFVQNYYVNPLLYKVYTVDAYGSFLIDNFSTFIKQVYAVGARKIGVTSLPPTGCLPAARTLFGFHEKGCVSRLNTDAQNFNKKLNAAASKLQKQYSDLKIVVFDIYSPLYDLVQNPSKSGFTEATKGC 297          
BLAST of CX289241 vs. ExPASy Swiss-Prot
Match: GDL72_ARATH (GDSL esterase/lipase At5g03810 OS=Arabidopsis thaliana GN=At5g03810 PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 6.897e-41
Identity = 75/139 (53.96%), Postives = 105/139 (75.54%), Query Frame = 2
Query:    5 AIYIVGAGSGDFLQNYYAKPSLNKVYTPEQYSSMLVKSFSSFIKNLYGLGARKFGVTSLPPLGCFPAARILFGNHGRG-CVSRINIAAQQFNKKVNSSASNLQKQLPGLKIVIFDIFKPLFELVQSPSKFGFVEATRSC 418
            AI+++  GS DFLQ+YY  P LN+++TP+QYS  L++S+S+F++NLYGLGAR+ GVT+LPPLGC PAA  LFG  G   CV R+N  A  FN K+N+++ NL   LPGLK+V+FDI+ PL  +V +P ++GF E+ R+C
Sbjct:  160 AIHLLSTGSSDFLQSYYINPILNRIFTPDQYSDHLLRSYSTFVQNLYGLGARRIGVTTLPPLGCLPAAITLFGGVGNNMCVERLNQDAVSFNTKLNNTSINLTNNLPGLKLVVFDIYNPLLNMVINPVEYGFFESRRAC 298          
BLAST of CX289241 vs. ExPASy Swiss-Prot
Match: GDL73_ARATH (GDSL esterase/lipase At5g03820 OS=Arabidopsis thaliana GN=At5g03820 PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 1.301e-39
Identity = 74/140 (52.86%), Postives = 101/140 (72.14%), Query Frame = 2
Query:    5 AIYIVGAGSGDFLQNYYAKPSLNKVYTPEQYSSMLVKSFSSFIKNLYGLGARKFGVTSLPPLGCFPAARILFGNHGRG--CVSRINIAAQQFNKKVNSSASNLQKQLPGLKIVIFDIFKPLFELVQSPSKFGFVEATRSC 418
            AI+++  GS DFLQ+YY  P LN+++TP+QYS  L+K +S+F++NLY LGARK GVT+LPPLGC PAA  LFG  G    CV R+N  A  FN K+N+++ NL   LPGLK+V+FDI+ PL  +  +P + GF E+ R+C
Sbjct:  160 AIHLLSTGSSDFLQSYYINPILNRIFTPDQYSDRLMKPYSTFVQNLYDLGARKIGVTTLPPLGCLPAAITLFGETGNNNTCVERLNQDAVSFNTKLNNTSMNLTNNLPGLKLVVFDIYNPLLNMAMNPVENGFFESRRAC 299          
BLAST of CX289241 vs. ExPASy Swiss-Prot
Match: GDL78_ARATH (GDSL esterase/lipase At5g22810 OS=Arabidopsis thaliana GN=At5g22810 PE=2 SV=2)

HSP 1 Score: 160.229 bits (404), Expect = 2.898e-39
Identity = 72/139 (51.80%), Postives = 103/139 (74.10%), Query Frame = 2
Query:    2 DAIYIVGAGSGDFLQNYYAKPSLNKVYTPEQYSSMLVKSFSSFIKNLYGLGARKFGVTSLPPLGCFPAARILFGNHGRGCVSRINIAAQQFNKKVNSSASNLQKQLPGLKIVIFDIFKPLFELVQSPSKFGFVEATRSC 418
            + IYIV AGS DF+QNYY  P L +  +P+++S +L+ S+SSFI+NLY LGAR+ GVT+LPPLGC PAA  + G H  GC  ++N  A  FN K+N+++ +L++ L GL +V+FDI++PL++L   PS+FGF EA R+C
Sbjct:  152 NGIYIVSAGSSDFIQNYYINPLLYRDQSPDEFSDLLILSYSSFIQNLYSLGARRIGVTTLPPLGCLPAAITVVGPHEGGCSEKLNNDAISFNNKLNTTSQDLKRNLIGLNLVVFDIYQPLYDLATRPSEFGFAEARRAC 290          
BLAST of CX289241 vs. ExPASy Swiss-Prot
Match: GDL59_ARATH (GDSL esterase/lipase At3g53100 OS=Arabidopsis thaliana GN=At3g53100 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 6.253e-34
Identity = 65/137 (47.45%), Postives = 95/137 (69.34%), Query Frame = 2
Query:    8 IYIVGAGSGDFLQNYYAKPSLNKVYTPEQYSSMLVKSFSSFIKNLYGLGARKFGVTSLPPLGCFPAARILFGNHGRGCVSRINIAAQQFNKKVNSSASNLQKQLPGLKIVIFDIFKPLFELVQSPSKFGFVEATRSC 418
            I+I+ AGS DFLQNYY  P LN + TP+Q++ +L++SFS FI+NLY LGAR+ GV SLPP+GC PAA  LFG   + CV R+N  A  FN K+ ++   L  +  GL++V F++++P  +++ +P+  GF E  R+C
Sbjct:  160 IHILSAGSSDFLQNYYINPLLNILNTPDQFADILLRSFSEFIQNLYELGARRIGVISLPPMGCLPAAITLFGAGNKSCVERLNNDAIMFNTKLENTTRLLMNRHSGLRLVAFNVYQPFLDIITNPTDNGFFETKRAC 296          
BLAST of CX289241 vs. ExPASy Swiss-Prot
Match: GDL34_ARATH (GDSL esterase/lipase At2g04570 OS=Arabidopsis thaliana GN=At2g04570 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.016e-24
Identity = 51/138 (36.96%), Postives = 76/138 (55.07%), Query Frame = 2
Query:    5 AIYIVGAGSGDFLQNYYAKPSLNKVYTPEQYSSMLVKSFSSFIKNLYGLGARKFGVTSLPPLGCFPAARILFGNHGRGCVSRINIAAQQFNKKVNSSASNLQKQLPGLKIVIFDIFKPLFELVQSPSKFGFVEATRSC 418
            ++Y++  G+ DFL+NY+A P  +  Y+   Y   L      F+K L+GLGARK  +  LPP+GC P  R      G  CV R N  A QFN K++     L K+LPG  +V  + ++P   ++++PS FGF     +C
Sbjct:  158 SLYLISIGTNDFLENYFAFPGRSSQYSVSLYQDFLAGIAKEFVKKLHGLGARKISLGGLPPMGCMPLERATNIGTGGECVGRYNDIAVQFNSKLDKMVEKLSKELPGSNLVFSNPYEPFMRIIKNPSSFGFEVVGAAC 295          
BLAST of CX289241 vs. ExPASy Swiss-Prot
Match: GDL89_ARATH (GDSL esterase/lipase At5g63170 OS=Arabidopsis thaliana GN=At5g63170 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.439e-24
Identity = 53/139 (38.13%), Postives = 77/139 (55.40%), Query Frame = 2
Query:    2 DAIYIVGAGSGDFLQNYYAKPSLNKVYTPEQYSSMLVKSFSSFIKNLYGLGARKFGVTSLPPLGCFPAARILFGNHGRGCVSRINIAAQQFNKKVNSSASNLQKQLPGLKIVIFDIFKPLFELVQSPSKFGFVEATRSC 418
            +A++++ AG+ D    Y+  P  N  YT   Y+ ++V    SFIK LY LGARKF +    PLGC P A    G     C+   N  A+ FN+K+    +NL   LPG + +  D++ PL ELV++P + GF+  TR C
Sbjct:  158 NAVFVISAGNNDIAITYFTNPIRNTRYTIFSYTDLMVSWTQSFIKELYNLGARKFAIMGTLPLGCLPGASNALGGL---CLEPANAVARLFNRKLADEVNNLNSMLPGSRSIYVDMYNPLLELVKNPLRSGFISPTRPC 293          
BLAST of CX289241 vs. ExPASy Swiss-Prot
Match: GDL5_ARATH (GDSL esterase/lipase At1g23500 OS=Arabidopsis thaliana GN=At1g23500 PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.707e-23
Identity = 54/139 (38.85%), Postives = 78/139 (56.12%), Query Frame = 2
Query:    2 DAIYIVGAGSGDFLQNYYAKPSLNKVYTPEQYSSMLVKSFSSFIKNLYGLGARKFGVTSLPPLGCFPAARILFGNHGRGCVSRINIAAQQFNKKVNSSASNLQKQLPGLKIVIFDIFKPLFELVQSPSKFGFVEATRSC 418
            +A+Y++ AG+ D    Y   P+L   YT   Y+ +LV    + +K+LY +GARKF V    PLGC P AR   GN G  C+  IN  A  FN+K+++  +NL   LPG K V  D++ PL  L+ +P   GF++    C
Sbjct:  165 NAVYLISAGNNDLAITY---PTLMAQYTVSTYTDLLVTWTDNLLKSLYAMGARKFAVLGTLPLGCLPGARHTGGNFGNICLVPINQVAAIFNQKLSAKLNNLHTILPGAKFVYVDMYNPLLNLINNPRASGFIDVADGC 300          
BLAST of CX289241 vs. ExPASy Swiss-Prot
Match: EXL3_ARATH (GDSL esterase/lipase EXL3 OS=Arabidopsis thaliana GN=EXL3 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 6.486e-23
Identity = 50/142 (35.21%), Postives = 83/142 (58.45%), Query Frame = 2
Query:    2 DAIYIVGAGSGDFLQNYY---AKPSLNKVYTPEQYSSMLVKSFSSFIKNLYGLGARKFGVTSLPPLGCFPAARILFGNHGRGCVSRINIAAQQFNKKVNSSASNLQKQLPGLKIVIFDIFKPLFELVQSPSKFGFVEATRSC 418
            ++++++ AGS D    YY   A+P     Y  + Y++++  S S F+  LYG G R+  V   PP+GC P+ R L G   R C    N AA+ FN K++    +L+K LPG+K +  +I+ PLF+++Q+P+ +GF  + + C
Sbjct:  172 NSLFLLVAGSDDIANTYYTLRARPE----YDVDSYTTLMSDSASEFVTKLYGYGVRRVAVFGAPPIGCVPSQRTLGGGILRDCADNYNEAAKLFNSKLSPKLDSLRKTLPGIKPIYINIYDPLFDIIQNPANYGFEVSNKGC 309          
BLAST of CX289241 vs. ExPASy Swiss-Prot
Match: GDL23_ARATH (GDSL esterase/lipase At1g58430 OS=Arabidopsis thaliana GN=At1g58430 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.106e-22
Identity = 53/141 (37.59%), Postives = 79/141 (56.03%), Query Frame = 2
Query:    2 DAIYIVGAGSGDFLQNYYAKPSLNKVYTP-EQYSSMLVKSFSSFIKNLYGLGARKFGVTSLPPLGCFPAARIL-FGNHGRGCVSRINIAAQQFNKKVNSSASNLQKQLPGLKIVIFDIFKPLFELVQSPSKFGFVEATRSC 418
            +A+ +V AG  DF+ NYY  PS  ++Y     Y   ++   ++F+K LY LG RK  V  LPP+GC P      F N  R C+ + N  +  +N+K+       Q  L G KI+  D++ P+ E++Q+PSK+GF E TR C
Sbjct:  165 NALVVVSAGPNDFILNYYEVPSWRRMYPSISDYQDFVLSRLNNFVKELYSLGCRKILVGGLPPMGCLPIQMTAQFRNVLRFCLEQENRDSVLYNQKLQKLLPQTQASLTGSKILYSDVYDPMMEMLQNPSKYGFKETTRGC 305          
The following BLAST results are available for this feature:
BLAST of CX289241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
APG2_ARATH8.412e-4763.04GDSL esterase/lipase APG OS=Arabidopsis thaliana G... [more]
GDL72_ARATH6.897e-4153.96GDSL esterase/lipase At5g03810 OS=Arabidopsis thal... [more]
GDL73_ARATH1.301e-3952.86GDSL esterase/lipase At5g03820 OS=Arabidopsis thal... [more]
GDL78_ARATH2.898e-3951.80GDSL esterase/lipase At5g22810 OS=Arabidopsis thal... [more]
GDL59_ARATH6.253e-3447.45GDSL esterase/lipase At3g53100 OS=Arabidopsis thal... [more]
GDL34_ARATH2.016e-2436.96GDSL esterase/lipase At2g04570 OS=Arabidopsis thal... [more]
GDL89_ARATH3.439e-2438.13GDSL esterase/lipase At5g63170 OS=Arabidopsis thal... [more]
GDL5_ARATH1.707e-2338.85GDSL esterase/lipase At1g23500 OS=Arabidopsis thal... [more]
EXL3_ARATH6.486e-2335.21GDSL esterase/lipase EXL3 OS=Arabidopsis thaliana ... [more]
GDL23_ARATH1.106e-2237.59GDSL esterase/lipase At1g58430 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC02010G07SK IF1 Citrus clementina cDNA clone C02010G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289241 ID=CX289241; Name=CX289241; organism=Citrus clementina; type=EST; length=418bp
GGATGCAATATACATAGTGGGTGCTGGGAGTGGTGACTTTCTTCAGAATT
ACTATGCCAAACCATCGCTTAACAAAGTCTATACTCCTGAACAGTATAGC
TCAATGCTTGTCAAATCTTTCTCAAGTTTTATCAAGAATTTGTATGGATT
GGGAGCAAGGAAATTTGGAGTCACTTCATTGCCACCGCTGGGTTGCTTTC
CCGCAGCAAGAATTTTATTCGGTAATCATGGAAGGGGCTGTGTCTCTAGA
ATCAATATTGCTGCTCAACAATTTAATAAGAAGGTCAACTCTTCAGCATC
AAATCTCCAAAAGCAACTTCCTGGTCTGAAAATTGTGATTTTCGACATTT
TCAAGCCACTCTTTGAACTTGTCCAGTCCCCTTCAAAATTTGGCTTCGTG
GAAGCAACAAGAAGTTGC
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