CX289247
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289247 vs. ExPASy Swiss-Prot
Match: DCOR_DATST (Ornithine decarboxylase OS=Datura stramonium PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.895e-23 Identity = 52/99 (52.53%), Postives = 69/99 (69.70%), Query Frame = 3 Query: 3 INDGKFGSLAWVTCDEAIAKCTPLPFASSFTTSK-GLTRTYNSTVFGPTCDAFDEVFTGHKLPELEVNDWLVFSEMGAYTTACGTNFNGYSTAAIPTYV 296 INDG +GS+ V D A TPL S+ + G ++T+ STVFGPTCDA D V ++LPEL+VNDWL+F MGAYT A G+NFNG++T+AI T++ Sbjct: 327 INDGLYGSMNCVLYDHATVNATPLACMSNRSNLNCGGSKTFPSTVFGPTCDALDTVLRDYQLPELQVNDWLIFPNMGAYTKAAGSNFNGFNTSAIVTHL 425
BLAST of CX289247 vs. ExPASy Swiss-Prot
Match: DCOR_SOLLC (Ornithine decarboxylase OS=Solanum lycopersicum GN=ODC PE=2 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 6.644e-23 Identity = 52/99 (52.53%), Postives = 68/99 (68.69%), Query Frame = 3 Query: 3 INDGKFGSLAWVTCDEAIAKCTPLPFASSFTTSK-GLTRTYNSTVFGPTCDAFDEVFTGHKLPELEVNDWLVFSEMGAYTTACGTNFNGYSTAAIPTYV 296 INDG +GS+ V D A TPL S+ G ++T+ STVFGPTCDA D V ++LPEL+VNDWL+F MGAYT A G+NFNG++T+AI T++ Sbjct: 327 INDGLYGSMNCVLYDHATVTATPLACMSNRNNLNCGGSKTFPSTVFGPTCDALDTVLRDYQLPELQVNDWLIFPNMGAYTKAAGSNFNGFNTSAIVTHL 425
BLAST of CX289247 vs. ExPASy Swiss-Prot
Match: DCOR_CAPAN (Ornithine decarboxylase OS=Capsicum annuum GN=ODC PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.385e-20 Identity = 47/99 (47.47%), Postives = 66/99 (66.67%), Query Frame = 3 Query: 3 INDGKFGSLAWVTCDEAIAKCTPLPFASS-FTTSKGLTRTYNSTVFGPTCDAFDEVFTGHKLPELEVNDWLVFSEMGAYTTACGTNFNGYSTAAIPTYV 296 INDG +GS+ V D A TPL S+ + ++ + ST+FGPTCDA D V + +PEL+VNDW++F MGAYT A G+NFNG++T+AI T++ Sbjct: 331 INDGLYGSMNCVLYDHATVTATPLACMSNRVNLNCSGSKMFPSTIFGPTCDALDTVLRDYHVPELQVNDWVIFPNMGAYTKAAGSNFNGFNTSAIVTHL 429
BLAST of CX289247 vs. ExPASy Swiss-Prot
Match: DCOR_TRYBB (Ornithine decarboxylase OS=Trypanosoma brucei brucei PE=1 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 2.531e-14 Identity = 40/107 (37.38%), Postives = 60/107 (56.07%), Query Frame = 3 Query: 3 INDGKFGSLAWVTCDEAIAKCTPLPFASSFTTSKGLTRTYNSTVFGPTCDAFDEVFTGHKLPELEVNDWLVFSEMGAYTTACGTNFNG-------YSTAAIPTYVVR 302 +NDG +GS + D A+ + PLP K Y S+V+GPTCD D++ + LPE++V +WL+F +MGAYT ++FNG Y + +P +VVR Sbjct: 316 VNDGVYGSFNCILYDHAVVR--PLPQREPIPNEK----LYPSSVWGPTCDGLDQIVERYYLPEMQVGEWLLFEDMGAYTVVGTSSFNGFQSPTIYYVVSGLPDHVVR 416
BLAST of CX289247 vs. ExPASy Swiss-Prot
Match: DCOR1_XENLA (Ornithine decarboxylase 1 OS=Xenopus laevis GN=odc1-A PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.063e-12 Identity = 37/106 (34.91%), Postives = 57/106 (53.77%), Query Frame = 3 Query: 3 INDGKFGSLAWVTCDEAIAKCTPLPFASSFTTSKGLTRTYNSTVFGPTCDAFDEVFTGHKLPELEVNDWLVFSEMGAYTTACGTNFNGYSTAAIPTYVVRSNQTLL 320 +NDG +GS + D A K P + K + Y+S+++GPTCD D + +LPEL+V DW++F MGAYT A + FNG+ + + R + L+ Sbjct: 319 VNDGVYGSFNCILFDHAHVK----PVLTK--KPKPDEKFYSSSIWGPTCDGLDRIVERFELPELQVGDWMLFENMGAYTVAAASTFNGFQRPTLYYVMSRPHWQLM 418
BLAST of CX289247 vs. ExPASy Swiss-Prot
Match: DCOR_BOVIN (Ornithine decarboxylase OS=Bos taurus GN=ODC1 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.814e-12 Identity = 39/104 (37.50%), Postives = 53/104 (50.96%), Query Frame = 3 Query: 3 INDGKFGSLAWVTCDEAIAKCTPLPFASSFTTSKGLTRTYNSTVFGPTCDAFDEVFTGHKLPELEVNDWLVFSEMGAYTTACGTNFNGYSTAAIPTYVVRSNQT 314 +NDG +GS + D A K P K + Y+S+++GPTCD D + LPE+ V DW++F MGAYT A + FNG+ I Y V S T Sbjct: 318 VNDGVYGSFNCILYDHAHVK----PLLQK--RPKPDEKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMGAYTVAAASTFNGFQRPTI--YYVMSGPT 413
BLAST of CX289247 vs. ExPASy Swiss-Prot
Match: DCOR_CAEEL (Ornithine decarboxylase OS=Caenorhabditis elegans GN=odc-1 PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 2.369e-12 Identity = 39/99 (39.39%), Postives = 56/99 (56.57%), Query Frame = 3 Query: 3 INDGKFGSLAWVTCDEAIAKCTPLPFASSFTTSKGLTRTYNSTVFGPTCDAFDEVFTGHKLPELEVNDWLVFSEMGAYTTACGTNFNGYSTAAIPTYVV 299 INDG +GS + D A +PL F T + + ST++GPTCD+ D V +P++ V +WL + +MGAYT A T FNG+S +P YV+ Sbjct: 318 INDGVYGSFNCILFDHAHPIGSPL-----FDTDRN--EKFMSTIWGPTCDSLDLVEDKKLMPKMNVGEWLYYPDMGAYTLAAATTFNGFS-KPVPMYVM 408
BLAST of CX289247 vs. ExPASy Swiss-Prot
Match: DCOR_RAT (Ornithine decarboxylase OS=Rattus norvegicus GN=Odc1 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.093e-12 Identity = 38/106 (35.85%), Postives = 54/106 (50.94%), Query Frame = 3 Query: 3 INDGKFGSLAWVTCDEAIAKCTPLPFASSFTTSKGLTRTYNSTVFGPTCDAFDEVFTGHKLPELEVNDWLVFSEMGAYTTACGTNFNGYSTAAIPTYVVRSNQTLL 320 +NDG +GS + D A K A K + Y+S+++GPTCD D + LPE+ V DW++F MGAYT A + FNG+ I + RS L+ Sbjct: 318 VNDGVYGSFNCILYDHAHVK------ALLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCSLPEMHVGDWMLFENMGAYTVAAASTFNGFQRPNIYYVMSRSMWQLM 417
BLAST of CX289247 vs. ExPASy Swiss-Prot
Match: DCOR2_XENLA (Ornithine decarboxylase 2 OS=Xenopus laevis GN=odc1-B PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.093e-12 Identity = 36/94 (38.30%), Postives = 51/94 (54.26%), Query Frame = 3 Query: 3 INDGKFGSLAWVTCDEAIAKCTPLPFASSFTTSKGLTRTYNSTVFGPTCDAFDEVFTGHKLPELEVNDWLVFSEMGAYTTACGTNFNGYSTAAI 284 +NDG +GS + D A P P + Y S+++GPTCD D++ +LPEL V DWL+F MGAYT A +NFNG+ + + Sbjct: 315 VNDGVYGSFNCLVFDHA----HPKPILHKKPSPD--QPLYTSSLWGPTCDGLDQIAERVQLPELHVGDWLLFENMGAYTIAASSNFNGFQQSPV 402
BLAST of CX289247 vs. ExPASy Swiss-Prot
Match: DCOR_CRIGR (Ornithine decarboxylase OS=Cricetulus griseus GN=ODC1 PE=2 SV=3) HSP 1 Score: 70.0922 bits (170), Expect = 4.040e-12 Identity = 36/94 (38.30%), Postives = 51/94 (54.26%), Query Frame = 3 Query: 3 INDGKFGSLAWVTCDEAIAKCTPLPFASSFTTSKGLTRTYNSTVFGPTCDAFDEVFTGHKLPELEVNDWLVFSEMGAYTTACGTNFNGYSTAAI 284 +NDG +GS + D A K LP K + Y+S+++GPTCD D + LPE+ V DW++F MGAYT A + FNG+ +I Sbjct: 312 VNDGVYGSFNCILYDHAHVKPL-LP-----KRPKPDEKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMGAYTVAAASTFNGFQRPSI 399 The following BLAST results are available for this feature:
BLAST of CX289247 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289247 ID=CX289247; Name=CX289247; organism=Citrus clementina; type=EST; length=426bpback to top |