CX289270

Overview
NameCX289270
Unique NameCX289270
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length600
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289270 vs. ExPASy Swiss-Prot
Match: KSG8_ARATH (Shaggy-related protein kinase theta OS=Arabidopsis thaliana GN=ASK8 PE=2 SV=3)

HSP 1 Score: 231.876 bits (590), Expect = 1.937e-60
Identity = 125/201 (62.19%), Postives = 150/201 (74.63%), Query Frame = 1
Query:    1 KSIASGRTXXXXXXXXXXXXKRAKVDKELE-VNGEANLVERSASSLEQHMASTSLEPVASTSEAATVARTERSGFDQLPKEMNEMRIRDEKNVNHDDKDLEPSIVNGNGTEAGQVIATTVGGRNGQPKQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 600
            KSIASGRT            KRAK+D+E + +  +   V++++S  E      S E VA TS    V+  E+   DQLP  M EM+IRDE+N N +DKD+E ++VNG+GTE GQVI TTVGGR+G+PKQTISYMA+RVVGTGSFGVVFQAKCLETG+ VAIKKVLQDKRYKNRELQIMRL +HPNVV L+H FFSTT+KDE
Sbjct:    8 KSIASGRTSISSDPGGDYALKRAKLDQENDNLCVDPMQVDQNSSCFEMKADVLSQESVAGTSNVPAVS--EKPVDDQLPDVMIEMKIRDERNANREDKDMETTVVNGSGTETGQVITTTVGGRDGKPKQTISYMAQRVVGTGSFGVVFQAKCLETGEQVAIKKVLQDKRYKNRELQIMRLQDHPNVVRLRHSFFSTTDKDE 206          
BLAST of CX289270 vs. ExPASy Swiss-Prot
Match: KSGT_BRANA (Shaggy-related protein kinase theta OS=Brassica napus PE=2 SV=2)

HSP 1 Score: 212.616 bits (540), Expect = 1.216e-54
Identity = 120/207 (57.97%), Postives = 142/207 (68.60%), Query Frame = 1
Query:    1 KSIASGRTXXXXXXXXXXXXKRAKVDKELEVNGEANLVERSASSLE----QHMASTSLEPVASTSEAATVARTERSGFDQLPKEMNEMRIRDEK---NVNHDDKDLEPSIVNGNGTEAGQVIATTVGGRNGQPKQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 600
            KSIASGRT            KR K+D++ +     NL  R    ++      M   S + VA TS             DQLP+ MN+MR+R+++   N   +DKD+EP IVNG GTE GQVI TTVGGR+G+PKQTISYMA+RVVGTGSFGVVFQAKCLETG+ VAIKKVLQDKRYKNRELQIMRL +HPNVV L+H FFSTT+KDE
Sbjct:    8 KSIASGRTSISSDPGVDSSLKRPKLDQDND-----NLSSRGDDPMQVDQSTDMVVVSQDTVAGTSNVPPPP-------DQLPEVMNDMRLREDEPHANRGEEDKDMEPPIVNGCGTETGQVITTTVGGRDGKPKQTISYMAQRVVGTGSFGVVFQAKCLETGEQVAIKKVLQDKRYKNRELQIMRLQDHPNVVRLRHSFFSTTDKDE 202          
BLAST of CX289270 vs. ExPASy Swiss-Prot
Match: MSK1_TOBAC (Shaggy-related protein kinase NtK-1 OS=Nicotiana tabacum GN=NTK-1 PE=2 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 1.756e-53
Identity = 105/152 (69.08%), Postives = 123/152 (80.92%), Query Frame = 1
Query:  145 MASTSLEPVASTSEAATVARTERSGFDQLPKEMNEMRIRDEKNVNHDDKDLEPSIVNGNGTEAGQVIATTVGGRNGQPKQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 600
            M S  L PV+   E+++       G D+LP+EMN+MRIRD       DK++E +IV+GNGTE G +I TT+GGR+GQPKQTISYMAER+VG GSFGVVFQAKCLETG++VAIKKVLQDKRYKNRELQ MRLL+HPNVV LKHCFFSTTEKDE
Sbjct:    1 MTSVGLAPVSGLRESSS----HSVGVDRLPEEMNDMRIRD-------DKEIEAAIVDGNGTETGHIIVTTIGGRHGQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVCLKHCFFSTTEKDE 141          
BLAST of CX289270 vs. ExPASy Swiss-Prot
Match: KSG1_ARATH (Shaggy-related protein kinase alpha OS=Arabidopsis thaliana GN=ASK1 PE=2 SV=3)

HSP 1 Score: 207.994 bits (528), Expect = 2.995e-53
Identity = 102/144 (70.83%), Postives = 120/144 (83.33%), Query Frame = 1
Query:  169 VASTSEAATVARTERSGFDQLPKEMNEMRIRDEKNVNHDDKDLEPSIVNGNGTEAGQVIATTVGGRNGQPKQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 600
            +AS   A      + +G D+LP+EMN+M+IRD       DK++E ++V+GNGTE G +I TT+GGRNGQPKQTISYMAERVVG GSFGVVFQAKCLETG++VAIKKVLQD+RYKNRELQ MRLL+HPNVVSLKHCFFSTTEKDE
Sbjct:    1 MASVGIAPNPGARDSTGVDKLPEEMNDMKIRD-------DKEMEATVVDGNGTETGHIIVTTIGGRNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGETVAIKKVLQDRRYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDE 137          
BLAST of CX289270 vs. ExPASy Swiss-Prot
Match: KSG3_ARATH (Shaggy-related protein kinase gamma OS=Arabidopsis thaliana GN=ASK3 PE=2 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 7.376e-52
Identity = 104/152 (68.42%), Postives = 122/152 (80.26%), Query Frame = 1
Query:  145 MASTSLEPVASTSEAATVARTERSGFDQLPKEMNEMRIRDEKNVNHDDKDLEPSIVNGNGTEAGQVIATTVGGRNGQPKQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 600
            MAS  +EP A+  E+        +  D+LP+EM +M+I+D       DK++E +IVNGN TE G +I TT+GGRNGQPKQTISYMAERVVG GSFGVVFQAKCLETG++VAIKKVLQD+RYKNRELQ MRLL+HPNVVSLKHCFFSTTEKDE
Sbjct:    1 MASVGIEPSAAVRESTGNV----TDADRLPEEMKDMKIQD-------DKEMEATIVNGNVTETGHIIVTTIGGRNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGETVAIKKVLQDRRYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDE 141          
BLAST of CX289270 vs. ExPASy Swiss-Prot
Match: MSK1_MEDSA (Glycogen synthase kinase-3 homolog MsK-1 OS=Medicago sativa GN=MSK-1 PE=2 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 3.661e-51
Identity = 103/152 (67.76%), Postives = 121/152 (79.61%), Query Frame = 1
Query:  145 MASTSLEPVASTSEAATVARTERSGFDQLPKEMNEMRIRDEKNVNHDDKDLEPSIVNGNGTEAGQVIATTVGGRNGQPKQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 600
            MAS  + P +   E   +   E    D LP+EM++M+IRD       D+++E ++V+GNGTE G +I TT+GGRNGQPKQTISYMAERVVG GSFGVVFQAKCLETG++VAIKKVLQDKRYKNRELQ MRLL+HPNVVSLKHCFFSTTEKDE
Sbjct:    1 MASVGVAPTSGFREV--LGDGEIGVDDILPEEMSDMKIRD-------DREMEATVVDGNGTETGHIIVTTIGGRNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDE 143          
BLAST of CX289270 vs. ExPASy Swiss-Prot
Match: MSK3_MEDSA (Glycogen synthase kinase-3 homolog MsK-3 OS=Medicago sativa GN=MSK-3 PE=2 SV=2)

HSP 1 Score: 199.519 bits (506), Expect = 1.065e-50
Identity = 97/128 (75.78%), Postives = 112/128 (87.50%), Query Frame = 1
Query:  217 GFDQLPKEMNEMRIRDEKNVNHDDKDLEPSIVNGNGTEAGQVIATTVGGRNGQPKQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 600
            G ++LP+EMN+M+IRD+K +         +IV+GNGTE G +I TT+GG+NGQPKQTISYMAERVVG GSFGVVFQAKCLETG++VAIKKVLQDKRYKNRELQ MRLL+HPNVVSLKHCFFSTTEKDE
Sbjct:   21 GVEKLPEEMNDMKIRDDKEME------AATIVDGNGTETGHIIVTTIGGKNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDE 142          
BLAST of CX289270 vs. ExPASy Swiss-Prot
Match: KSG5_ARATH (Shaggy-related protein kinase epsilon OS=Arabidopsis thaliana GN=ASK5 PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 3.099e-50
Identity = 100/152 (65.79%), Postives = 120/152 (78.95%), Query Frame = 1
Query:  145 MASTSLEPVASTSEAATVARTERSGFDQLPKEMNEMRIRDEKNVNHDDKDLEPSIVNGNGTEAGQVIATTVGGRNGQPKQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 600
            MAS    P +S    AT         ++LP+ +NEM+I+D       DK++E ++V+GNGTE G +I TT+GG+NGQPKQTISYMAER+VG GSFG+VFQAKCLETG++VAIKKVLQDKRYKNRELQ MRLL+HPNVVSLKHCFFSTTEKDE
Sbjct:    1 MASVGTLPASSM---ATKQSNASICAEKLPEGINEMKIKD-------DKEMEAAVVDGNGTETGHIIVTTIGGKNGQPKQTISYMAERIVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDE 142          
BLAST of CX289270 vs. ExPASy Swiss-Prot
Match: MSK2_MEDSA (Glycogen synthase kinase-3 homolog MsK-2 OS=Medicago sativa GN=MSK-2 PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 3.426e-49
Identity = 99/144 (68.75%), Postives = 113/144 (78.47%), Query Frame = 1
Query:  169 VASTSEAATVARTERSGFDQLPKEMNEMRIRDEKNVNHDDKDLEPSIVNGNGTEAGQVIATTVGGRNGQPKQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 600
            VA  S    V  +     D+LP E+  MRI+D       DK++E  +V+GN TEAG VI TT+GG+NGQPKQTISYMAER VG GSFGVVFQAKCLETG++VAIKKVLQDKRYKNRELQ MRLL+HPNVV+LKHCFFSTTEKDE
Sbjct:    6 VAPASGIVDVNASSAIAVDKLPDEILGMRIKD-------DKEMEAHVVDGNSTEAGHVIVTTIGGKNGQPKQTISYMAERAVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVTLKHCFFSTTEKDE 142          
BLAST of CX289270 vs. ExPASy Swiss-Prot
Match: KSG6_ARATH (Shaggy-related protein kinase zeta OS=Arabidopsis thaliana GN=ASK6 PE=1 SV=2)

HSP 1 Score: 176.407 bits (446), Expect = 9.656e-44
Identity = 79/106 (74.53%), Postives = 97/106 (91.51%), Query Frame = 1
Query:  283 DDKDLEPSIVNGNGTEAGQVIATTVGGRNGQPKQTISYMAERVVGTGSFGVVFQAKCLETGDSVAIKKVLQDKRYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDE 600
            +DK++  +++ GN    G +I+TT+GG+NG+PKQTISYMAERVVGTGSFG+VFQAKCLETG+SVAIKKVLQD+RYKNRELQ+MRL++HPNVVSLKHCFFSTT +DE
Sbjct:   35 NDKEMSAAVIEGNDAVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGESVAIKKVLQDRRYKNRELQLMRLMDHPNVVSLKHCFFSTTTRDE 140          
The following BLAST results are available for this feature:
BLAST of CX289270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
KSG8_ARATH1.937e-6062.19Shaggy-related protein kinase theta OS=Arabidopsis... [more]
KSGT_BRANA1.216e-5457.97Shaggy-related protein kinase theta OS=Brassica na... [more]
MSK1_TOBAC1.756e-5369.08Shaggy-related protein kinase NtK-1 OS=Nicotiana t... [more]
KSG1_ARATH2.995e-5370.83Shaggy-related protein kinase alpha OS=Arabidopsis... [more]
KSG3_ARATH7.376e-5268.42Shaggy-related protein kinase gamma OS=Arabidopsis... [more]
MSK1_MEDSA3.661e-5167.76Glycogen synthase kinase-3 homolog MsK-1 OS=Medica... [more]
MSK3_MEDSA1.065e-5075.78Glycogen synthase kinase-3 homolog MsK-3 OS=Medica... [more]
KSG5_ARATH3.099e-5065.79Shaggy-related protein kinase epsilon OS=Arabidops... [more]
MSK2_MEDSA3.426e-4968.75Glycogen synthase kinase-3 homolog MsK-2 OS=Medica... [more]
KSG6_ARATH9.656e-4474.53Shaggy-related protein kinase zeta OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionC02011B01SK IF1 Citrus clementina cDNA clone C02011B01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289270 ID=CX289270; Name=CX289270; organism=Citrus clementina; type=EST; length=600bp
AAGAGCATTGCTTCTGGTCGCACTTCTATTTCTTCTGATCCGGGTGGAGA
TTCTGGCATAAAGAGGGCAAAGGTCGATAAAGAATTAGAGGTAAATGGGG
AAGCAAATTTGGTTGAAAGAAGTGCCTCCAGTCTAGAGCAGCATATGGCT
TCTACATCTCTGGAGCCTGTTGCAAGCACGTCCGAAGCAGCCACAGTTGC
TAGAACTGAAAGATCAGGTTTTGATCAACTGCCTAAGGAAATGAATGAGA
TGAGAATAAGAGATGAAAAAAATGTTAACCATGATGATAAGGATTTGGAA
CCCTCAATTGTCAATGGCAATGGAACAGAAGCAGGTCAAGTCATTGCTAC
TACAGTAGGTGGTCGAAATGGACAACCAAAGCAGACAATCTCCTATATGG
CAGAACGTGTGGTGGGGACTGGTTCCTTTGGTGTTGTCTTCCAAGCTAAG
TGCCTTGAAACAGGGGACTCTGTTGCAATAAAGAAGGTGCTCCAGGATAA
GAGATACAAGAATAGGGAACTCCAAATTATGCGTTTACTTAACCATCCTA
ATGTTGTTTCTCTGAAACATTGTTTCTTTTCAACTACTGAGAAAGATGAG
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