CX289295

Overview
NameCX289295
Unique NameCX289295
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length452
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289295 vs. ExPASy Swiss-Prot
Match: CRK10_ARATH (Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=2)

HSP 1 Score: 199.134 bits (505), Expect = 7.020e-51
Identity = 95/149 (63.76%), Postives = 119/149 (79.87%), Query Frame = 3
Query:    3 GTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSNFYQTDGAADLLSYAWKQWRDGTPLQLLDTNLTDSYSRNEVIRCIQLGLLCVQEDPAERPSMATIVLMLNSYSVTLPLPQQPAFFIGSRTERGLPTKEFECSDNTTSKSI 449
            GTYGYM+PEYAMHGQ+S+KSDVYSFGVLVLEII+GKKNS+FYQTDGA DL+SYAW  W +G PL+L+D  + ++  RNEV+RC+ +GLLCVQEDPAERP+++TIVLML S +VTLP+P+QP  F  SR  +           +TTSKS+
Sbjct:  501 GTYGYMSPEYAMHGQYSMKSDVYSFGVLVLEIISGKKNSSFYQTDGAHDLVSYAWGLWSNGRPLELVDPAIVENCQRNEVVRCVHIGLLCVQEDPAERPTLSTIVLMLTSNTVTLPVPRQPGLFFQSRIGKD------PLDTDTTSKSL 643          
BLAST of CX289295 vs. ExPASy Swiss-Prot
Match: CRK8_ARATH (Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana GN=CRK8 PE=2 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 2.337e-46
Identity = 90/151 (59.60%), Postives = 119/151 (78.81%), Query Frame = 3
Query:    3 GTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSNFYQTDGAADLLSYAWKQWRDGTPLQLLDTNLTDSYSRNEVIRCIQLGLLCVQEDPAERPSMATIVLMLNSYSVTLPLPQQPAFFIGSRTERGLPTKEFECSD-NTTSKSIP 452
            GTYGYMAPEYAMHGQFS+KSDVYSFGVLVLEII+G+KNS+F ++DGA DLL++ W+ W + T L L+D  + ++   +EV+RCI +GLLCVQEDPA+RP+++T+ +ML S +VTLP+P+QP FFI S      P K+   SD +TT+KS P
Sbjct:  517 GTYGYMAPEYAMHGQFSMKSDVYSFGVLVLEIISGRKNSSFDESDGAQDLLTHTWRLWTNRTALDLVDPLIANNCQNSEVVRCIHIGLLCVQEDPAKRPTISTVFMMLTSNTVTLPVPRQPGFFIQSS-----PVKDPTDSDQSTTTKSTP 662          
BLAST of CX289295 vs. ExPASy Swiss-Prot
Match: CRK7_ARATH (Cysteine-rich receptor-like protein kinase 7 OS=Arabidopsis thaliana GN=CRK7 PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 3.052e-46
Identity = 86/149 (57.72%), Postives = 115/149 (77.18%), Query Frame = 3
Query:    3 GTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSNFYQTDGAADLLSYAWKQWRDGTPLQLLDTNLTDSYSRNEVIRCIQLGLLCVQEDPAERPSMATIVLMLNSYSVTLPLPQQPAFFIGSRTERGLPTKEFECSDNTTSKSI 449
            GTYGYM+PEYAM GQFS+KSDVYSFGVLVLEII+G+KN++F +TD A DL+++AW+ WR+GT L L+D  + DS  ++EV+RC  +GLLCVQEDP +RP+M+TI +ML S ++ LP PQQP FF+ SR      T   +   +TT+KS+
Sbjct:  500 GTYGYMSPEYAMRGQFSMKSDVYSFGVLVLEIISGRKNNSFIETDDAQDLVTHAWRLWRNGTALDLVDPFIADSCRKSEVVRCTHIGLLCVQEDPVKRPAMSTISVMLTSNTMALPAPQQPGFFVRSRP----GTNRLDSDQSTTNKSV 644          
BLAST of CX289295 vs. ExPASy Swiss-Prot
Match: CRK25_ARATH (Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 3.052e-46
Identity = 85/151 (56.29%), Postives = 117/151 (77.48%), Query Frame = 3
Query:    3 GTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSNFYQTDGAADLLSYAWKQWRDGTPLQLLDTNLTDSYSRNEVIRCIQLGLLCVQEDPAERPSMATIVLMLNSYSVTLPLPQQPAFFIGSRTERGLPTKEFECSDNT-TSKSIP 452
            GTYGYM+PEYA+HG++SVKSDVYSFGVLVLE+ITGKKNS+FY+ DG  DL++Y WK W + +PL+L+D  +  ++  NEVIRCI + LLCVQED +ERPSM  I++M+NS++VTLP+P++  F + +  +   P      SD++ TSKS+P
Sbjct:  511 GTYGYMSPEYAIHGKYSVKSDVYSFGVLVLELITGKKNSSFYEEDGLGDLVTYVWKLWVENSPLELVDEAMRGNFQTNEVIRCIHIALLCVQEDSSERPSMDDILVMMNSFTVTLPIPKRSGFLLRTMKDSRDPRSGGSASDHSATSKSLP 661          
BLAST of CX289295 vs. ExPASy Swiss-Prot
Match: CRK6_ARATH (Cysteine-rich receptor-like protein kinase 6 OS=Arabidopsis thaliana GN=CRK6 PE=1 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 5.206e-46
Identity = 86/150 (57.33%), Postives = 116/150 (77.33%), Query Frame = 3
Query:    3 GTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSNFYQTDGAADLLSYAWKQWRDGTPLQLLDTNLTDSYSRNEVIRCIQLGLLCVQEDPAERPSMATIVLMLNSYSVTLPLPQQPAFFIGSRTERGLPTKEFECSDNTTSKSIP 452
            GTYGYMAPEYAMHGQFS+KSDVYSFGVLVLEII+G+KNS+F ++DGA DLL++AW+ W +   L L+D  + ++   +EV+RCI +GLLCVQEDPA+RP+++T+ +ML S +VTLP+P+QP FFI  R  +       +   +TT+KS P
Sbjct:  515 GTYGYMAPEYAMHGQFSMKSDVYSFGVLVLEIISGRKNSSFGESDGAQDLLTHAWRLWTNKKALDLVDPLIAENCQNSEVVRCIHIGLLCVQEDPAKRPAISTVFMMLTSNTVTLPVPRQPGFFIQCRAVK----DPLDSDQSTTTKSFP 660          
BLAST of CX289295 vs. ExPASy Swiss-Prot
Match: CRK15_ARATH (Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana GN=CRK15 PE=2 SV=2)

HSP 1 Score: 179.874 bits (455), Expect = 4.407e-45
Identity = 83/127 (65.35%), Postives = 107/127 (84.25%), Query Frame = 3
Query:    3 GTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSNFYQTDGAADLLSYAWKQWRDGTPLQLLDTNLTDSYSRNEVIRCIQLGLLCVQEDPAERPSMATIVLMLNSYSVTLPLPQQPAFFIGS 383
            GT+GYMAPEYA+HGQFSVKSDVYSFGVLVLEII+GKKN++FY+TDGA DL+++AW+ W +GT L L+D  + D+  ++EV+RCI + LLCVQEDPAERP ++TI +ML S +VTLP+P QP F + S
Sbjct:  501 GTFGYMAPEYAIHGQFSVKSDVYSFGVLVLEIISGKKNNSFYETDGAHDLVTHAWRLWSNGTALDLVDPIIIDNCQKSEVVRCIHICLLCVQEDPAERPILSTIFMMLTSNTVTLPVPLQPGFPVQS 627          
BLAST of CX289295 vs. ExPASy Swiss-Prot
Match: CRK5_ARATH (Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 6.364e-44
Identity = 86/152 (56.58%), Postives = 112/152 (73.68%), Query Frame = 3
Query:    3 GTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSNFYQTDGA-ADLLSYAWKQWRDGTPLQLLDTNLTDSYSRNEVIRCIQLGLLCVQEDPAERPSMATIVLMLNSYSVTLPLPQQPAFFIGSRTERGLPT--KEFECSDNTTSKSI 449
            GTYGYM+PEYAM+GQFS+KSDVYSFGVLVLEII+G+KNS+ YQ D +  +L++Y W+ W DG+PL L+D++  DSY RNE+IRCI + LLCVQED   RP+M+ IV ML + S+ L +PQ P FF  S  E+  P+  K   CS +  S +I
Sbjct:  504 GTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGRKNSSLYQMDASFGNLVTYTWRLWSDGSPLDLVDSSFRDSYQRNEIIRCIHIALLCVQEDTENRPTMSAIVQMLTTSSIALAVPQPPGFFFRSNHEQAGPSMDKSSLCSIDAASITI 655          
BLAST of CX289295 vs. ExPASy Swiss-Prot
Match: CRK33_ARATH (Putative cysteine-rich receptor-like protein kinase 33 OS=Arabidopsis thaliana GN=CRK33 PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 8.311e-44
Identity = 77/124 (62.10%), Postives = 105/124 (84.68%), Query Frame = 3
Query:    3 GTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSNFYQTDGAA-DLLSYAWKQWRDGTPLQLLDTNLTDSYSRNEVIRCIQLGLLCVQEDPAERPSMATIVLMLNSYSVTLPLPQQPAF 371
            GT+GY++PEY MHGQFSVKSDVYSFGVLVLEII+GK+NSNF++TD +  +L++YAW+ WR+G+PL+L+D+ L  +Y  NEV RCI + LLCVQ DP +RP+++TI++ML S S+TLP+PQ P +
Sbjct:  485 GTHGYISPEYLMHGQFSVKSDVYSFGVLVLEIISGKRNSNFHETDESGKNLVTYAWRHWRNGSPLELVDSELEKNYQSNEVFRCIHIALLCVQNDPEQRPNLSTIIMMLTSNSITLPVPQSPVY 608          
BLAST of CX289295 vs. ExPASy Swiss-Prot
Match: CRK4_ARATH (Cysteine-rich receptor-like protein kinase 4 OS=Arabidopsis thaliana GN=CRK4 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 1.016e-41
Identity = 79/129 (61.24%), Postives = 102/129 (79.07%), Query Frame = 3
Query:    3 GTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSNFYQTDG--AADLLSYAWKQWRDGTPLQLLDTNLTDSYSRNEVIRCIQLGLLCVQEDPAERPSMATIVLMLNSYSVTLPLPQQPAFFIGS 383
            GTYGYM+PEYAM+GQFS+KSDVYSFGVLVLEII+GKKNSN YQ DG  A +L++Y W+ W +G+PL+L+D +  D+Y  NEV RCI + LLCVQE+  +RP+M+ IV ML + S+ L +PQ+P FF  S
Sbjct:  515 GTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGKKNSNVYQMDGTSAGNLVTYTWRLWSNGSPLELVDPSFRDNYRINEVSRCIHIALLCVQEEAEDRPTMSAIVQMLTTSSIALAVPQRPGFFFRS 643          
BLAST of CX289295 vs. ExPASy Swiss-Prot
Match: CRK29_ARATH (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 1.327e-41
Identity = 83/129 (64.34%), Postives = 103/129 (79.84%), Query Frame = 3
Query:    3 GTYGYMAPEYAMHGQFSVKSDVYSFGVLVLEIITGKKNSNFYQT--DGAADLLSYAWKQWRDGTPLQLLDTNLTDSYSRNEVIRCIQLGLLCVQEDPAERPSMATIVLMLNSYSVTLPLPQQPAFFIGS 383
            GTYGYMAPEYAMHGQFSVK+DV+SFGVLV+EIITGK+N+N      + A DLLS+ W+ WR+ T L ++D +LT + SRNE++RCI +GLLCVQE  A RP+MAT+ LMLNSYS TLP P +PAF + S
Sbjct:  523 GTYGYMAPEYAMHGQFSVKTDVFSFGVLVIEIITGKRNNNGGSNGDEDAEDLLSWVWRSWREDTILSVIDPSLT-AGSRNEILRCIHIGLLCVQESAATRPTMATVSLMLNSYSFTLPTPLRPAFVLES 650          
The following BLAST results are available for this feature:
BLAST of CX289295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 132
Match NameE-valueIdentityDescription
CRK10_ARATH7.020e-5163.76Cysteine-rich receptor-like protein kinase 10 OS=A... [more]
CRK8_ARATH2.337e-4659.60Cysteine-rich receptor-like protein kinase 8 OS=Ar... [more]
CRK7_ARATH3.052e-4657.72Cysteine-rich receptor-like protein kinase 7 OS=Ar... [more]
CRK25_ARATH3.052e-4656.29Cysteine-rich receptor-like protein kinase 25 OS=A... [more]
CRK6_ARATH5.206e-4657.33Cysteine-rich receptor-like protein kinase 6 OS=Ar... [more]
CRK15_ARATH4.407e-4565.35Cysteine-rich receptor-like protein kinase 15 OS=A... [more]
CRK5_ARATH6.364e-4456.58Cysteine-rich receptor-like protein kinase 5 OS=Ar... [more]
CRK33_ARATH8.311e-4462.10Putative cysteine-rich receptor-like protein kinas... [more]
CRK4_ARATH1.016e-4161.24Cysteine-rich receptor-like protein kinase 4 OS=Ar... [more]
CRK29_ARATH1.327e-4164.34Cysteine-rich receptor-like protein kinase 29 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionC02011D07SK IF1 Citrus clementina cDNA clone C02011D07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289295 ID=CX289295; Name=CX289295; organism=Citrus clementina; type=EST; length=452bp
TTGGGACATATGGATACATGGCCCCAGAATATGCTATGCATGGGCAATTT
TCTGTGAAATCAGATGTATATAGTTTTGGTGTCCTAGTTTTGGAGATTAT
AACCGGCAAGAAGAACAGCAACTTTTATCAAACAGATGGTGCTGCAGATC
TTTTGAGCTATGCTTGGAAACAATGGAGGGATGGAACTCCTTTGCAGTTG
TTGGATACAAATCTGACAGATTCTTACTCAAGAAATGAAGTGATTAGATG
CATCCAATTGGGCTTATTATGCGTCCAGGAAGATCCAGCTGAGAGGCCAT
CAATGGCAACAATAGTTCTCATGCTCAATAGTTACTCTGTCACACTTCCG
TTGCCTCAACAGCCTGCATTTTTCATAGGCAGTCGAACTGAGAGGGGCTT
GCCCACAAAAGAATTTGAGTGCTCTGATAATACTACAAGCAAGTCGATTC
CA
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