CX289300
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289300 vs. ExPASy Swiss-Prot
Match: S47A2_HUMAN (Multidrug and toxin extrusion protein 2 OS=Homo sapiens GN=SLC47A2 PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.357e-24 Identity = 62/181 (34.25%), Postives = 99/181 (54.70%), Query Frame = -2 Query: 1 AVLHPIRAFLRT------QGLTAPLTIAAVCAVVLHVPINYILAIHLNLGIKGVALALACNTFNLNLGLIIYVIMSKNSLKPWHGFTILSFFQGWGPLLGLAVPSCISVCLEWWWYEIMLFLCGLLSNPEACVAAMGILIQTTALLYVFPFALSCSLTTRVGHALGAGQPSRAQWTAIIGI 525 ++LHP + L Q +T P ++ V ++ NY L LNLG++G A A + F + L++Y+++ K L+ W G++ Q WGP LAVPS + +C+EWW YEI FL GLLS + ++A ++ + + Y+ P LS + RVG ALGA +A+ +A+ G+ Sbjct: 195 SILHPSHSHLSRASFHLFQKITWPQVLSGVVGNCVNGVANYALVSVLNLGVRGSAYANIISQFAQTVFLLLYIVLKKLHLETWAGWSS-QCLQDWGPFFSLAVPSMLMICVEWWAYEIGSFLMGLLSVVD--LSAQAVIYEVATVTYMIPLGLSIGVCVRVGMALGAADTVQAKRSAVSGV 372
BLAST of CX289300 vs. ExPASy Swiss-Prot
Match: S47A1_RABIT (Multidrug and toxin extrusion protein 1 OS=Oryctolagus cuniculus GN=SLC47A1 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.357e-24 Identity = 62/187 (33.16%), Postives = 98/187 (52.41%), Query Frame = -2 Query: 1 YMVFSIPELLAQAVLHPIRAFLRTQGLTAPLTIAAVCAVVLHVPINYILAIHLNLGIKGVALALACNTFNLNLGLIIYVIMSKNSLKPWHGFTILSFFQGWGPLLGLAVPSCISVCLEWWWYEIMLFLCGLLSNPEACVAAMGILIQTTALLYVFPFALSCSLTTRVGHALGAGQPSRAQWTAIIGI 561 Y+ IP L A + +L QG+ P + V A +++ NY+ L+LG+ G ALA F L L L +Y++ SK W G++ L Q W LA+PS + +C+EWW YEI FL G+L E + A + + ++Y+ P LS ++ RVG+ALGAG +A+ ++ + + Sbjct: 156 YVTIFIPALPATFLYTLQVKYLLNQGIVLPQVVTGVAANLVNALANYLFVYQLHLGVMGSALANTVAQFTLALLLFLYILRSKVYQATWGGWS-LECLQDWASFFRLAIPSMLMLCMEWWAYEIGSFLSGILGMVE--LGAQSVTYELAVIVYMIPMGLSVAVNVRVGNALGAGNIEQAKKSSAVAL 339
BLAST of CX289300 vs. ExPASy Swiss-Prot
Match: S47A2_MOUSE (Multidrug and toxin extrusion protein 2 OS=Mus musculus GN=Slc47a2 PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 9.767e-24 Identity = 62/181 (34.25%), Postives = 98/181 (54.14%), Query Frame = -2 Query: 22 VYMVFSIPELLAQAVLHPIRAFLRTQGLTAPLTIAAVCAVVLHVPINYILAIHLNLGIKGVALALACNTFNLNLGLIIYVIMSKNSLKPWHGFTILSFFQGWGPLLGLAVPSCISVCLEWWWYEIMLFLCGLLSNPEACVAAMGILIQTTALLYVFPFALSCSLTTRVGHALGAGQPSRAQ 564 VY++ IP L A + +L++QG+ P I + A V++V +N L L+LG+ G A A + F L+ L +YV + + W G+T FQ W LA+PS VC+EWW +EI FL GL++ E + A ++ + ++ Y+ PF + + RVG+ALGAG +A+ Sbjct: 165 VYVMICIPALPAAFLFQLQTRYLQSQGIIMPQVIVGIAANVVNVGMNAFLLYALDLGVVGSAWANTTSQFFLSALLFLYVWWKRIHIHTWGGWT-RECFQEWSSYTRLAIPSMFMVCIEWWTFEIGTFLAGLVNVTE--LGAQAVIYELASVAYMVPFGFGVAASVRVGNALGAGNADQAR 342
BLAST of CX289300 vs. ExPASy Swiss-Prot
Match: S47A1_XENTR (Multidrug and toxin extrusion protein 1 OS=Xenopus tropicalis GN=slc47a1 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.276e-23 Identity = 58/186 (31.18%), Postives = 101/186 (54.30%), Query Frame = -2 Query: 7 VYMVFSIPELLAQAVLHPIRAFLRTQGLTAPLTIAAVCAVVLHVPINYILAIHLNLGIKGVALALACNTFNLNLGLIIYVIMSKNSLKPWHGFTILSFFQGWGPLLGLAVPSCISVCLEWWWYEIMLFLCGLLSNPEACVAAMGILIQTTALLYVFPFALSCSLTTRVGHALGAGQPSRAQWTAII 564 +Y++ +P L A + + +L+ QG+ P + A + + NYIL L LG+ G A A + F + L +Y++ + W G++ + F+ WG + LAV S + +C+EWW +EI +FL G+L + +AA I+ Q ++Y+ P L + + RVGH LGAG +A+ +A++ Sbjct: 170 IYVLIFLPALPAAFLYQLLAKYLQNQGIIYPQVLTGFIANIFNALFNYILLYVLGLGVMGSACANTVSQFIQMILLFLYIVWRRLYADTWGGWS-QACFEEWGAFIRLAVASMLMLCIEWWAFEISMFLAGVLGMVD--LAAQAIIYQVAIVVYLIPLGLCIAGSIRVGHGLGAGNTEQAKRSALV 352
BLAST of CX289300 vs. ExPASy Swiss-Prot
Match: S47A2_RABIT (Multidrug and toxin extrusion protein 2 OS=Oryctolagus cuniculus GN=SLC47A2 PE=1 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.666e-23 Identity = 60/187 (32.09%), Postives = 101/187 (54.01%), Query Frame = -2 Query: 1 YMVFSIPELLAQAVLHPIRAFLRTQGLTAPLTIAAVCAVVLHVPINYILAIHLNLGIKGVALALACNTFNLNLGLIIYVIMSKNSLKPWHGFTILSFFQGWGPLLGLAVPSCISVCLEWWWYEIMLFLCGLLSNPEACVAAMGILIQTTALLYVFPFALSCSLTTRVGHALGAGQPSRAQWTAIIGI 561 Y + IP L A + + +L+ QG+ P ++ V ++ NY L LNLG++G A A + F L +++++ K L+ W G++ + WGP L LA+PS + +C+EWW YEI FL GLL + ++ I+ + ++Y+ P L ++ RVG ALGA +A+ +A+ G+ Sbjct: 182 YAMIFIPGLPAIFLYSLLAKYLQNQGIVWPQVLSGVVGNCVNGVANYALVSVLNLGVRGSAYANTISQFVQAAFLFLHIVLKKLHLETWEGWSS-QCLRDWGPFLSLAIPSMLMMCVEWWAYEIGSFLMGLLGVVD--LSGQAIIYEVATVVYMIPMGLGMAVCVRVGTALGAADTLQAKRSAVSGL 365
BLAST of CX289300 vs. ExPASy Swiss-Prot
Match: S47A1_MOUSE (Multidrug and toxin extrusion protein 1 OS=Mus musculus GN=Slc47a1 PE=1 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 4.847e-23 Identity = 61/188 (32.45%), Postives = 102/188 (54.26%), Query Frame = -2 Query: 1 YMVFSIPELLAQAVLHPIRA-FLRTQGLTAPLTIAAVCAVVLHVPINYILAIHLNLGIKGVALALACNTFNLNLGLIIYVIMSKNSLKPWHGFTILSFFQGWGPLLGLAVPSCISVCLEWWWYEIMLFLCGLLSNPEACVAAMGILIQTTALLYVFPFALSCSLTTRVGHALGAGQPSRAQWTAIIGI 561 Y++ IP L A A L+ ++ +L QG+ P + + A +++ NY+ HL+LG+ G ALA + F L + L +Y++ + W G++ Q W L LA+PS + +C+EWW YE+ FL G+L E + A I + ++Y+ P S + RVG+ALGAG +A+ ++ I + Sbjct: 157 YVMIFIPALPA-AFLYTLQVKYLLNQGIVLPQIMTGIAANLVNALANYVFLYHLHLGVMGSALANTISQFALAIFLFLYILWRRLHQATWGGWS-WECLQDWASFLRLAIPSMLMLCIEWWAYEVGSFLSGILGMVE--LGAQSITYELAIIVYMIPSGFSVAANVRVGNALGAGNIDQAKKSSAISL 340
BLAST of CX289300 vs. ExPASy Swiss-Prot
Match: S47A1_DANRE (Multidrug and toxin extrusion protein 1 OS=Danio rerio GN=slc47a1 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 6.331e-23 Identity = 59/188 (31.38%), Postives = 98/188 (52.13%), Query Frame = -2 Query: 1 VYMVFSIPELLAQAVLHPIRAFLRTQGLTAPLTIAAVCAVVLHVPINYILAIHLNLGIKGVALALACNTFNLNLGLIIYVIMSKNSLKPWHGFTILSFFQGWGPLLGLAVPSCISVCLEWWWYEIMLFLCGLLSNPEACVAAMGILIQTTALLYVFPFALSCSLTTRVGHALGAGQPSRAQWTAIIGI 564 +Y+ +P L A + +L+ QG+ P I +L+ INY+ L LG+ G A A + ++L + L +Y+ W G++ Q WG + LA+PS + +C+EWW YEI FL GL+S E + A ++ + + Y+FP + + + RVG+ALGAG RA+ +A + + Sbjct: 174 LYVKIFMPALPAAFMYQLQGRYLQNQGIIWPQVITGAAGNILNALINYVFLHLLELGVAGSAAANTISQYSLAVFLYVYIRWKNLHKATWDGWS-RDCLQEWGAFIRLALPSMLMLCVEWWTYEIGGFLAGLISETE--LGAQSVVYELATIAYMFPLGFAVAASVRVGNALGAGNTERAKLSAKVAL 358
BLAST of CX289300 vs. ExPASy Swiss-Prot
Match: S47A2_PONAB (Multidrug and toxin extrusion protein 2 OS=Pongo abelii GN=SLC47A2 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.080e-22 Identity = 63/201 (31.34%), Postives = 104/201 (51.74%), Query Frame = -2 Query: 1 YMVFSIPELLAQAVLHPIRAFLRTQGLTAPLTIAAVCAVVLHVPINYILAIHLNLGIKGVALALACNTFNLNLGLIIYVIMSKNSLKPWHGFTILSFFQGWGPLLGLAVPSCISVCLEWWWYEIMLFLCGLLSNPEACVAAMGILIQTTALLYV--------------FPFALSCSLTTRVGHALGAGQPSRAQWTAIIGI 561 Y++ IP L + + + +L+ Q +T P ++ V ++ NY L LNLG++G A A + F + L++Y+++ K L+ W G++ Q WGP LAVPS + +C+EWW YEI FL GLLS + ++A ++ + + Y+ P LS + RVG ALGA +A+ +A+ G+ Sbjct: 153 YVMIFIPGLPVIFLYNLLAKYLQNQKITWPQVLSGVVGNCVNGVANYALVSVLNLGVRGSAYANIISQFAQTVFLLLYIVLKKLHLETWAGWSS-QCLQDWGPFFSLAVPSMLMICVEWWAYEIGSFLMGLLSVVD--LSAQAVIYEVATVTYMRHSHHLAYTAHVARIPLGLSIGVCVRVGMALGAADTVQAKRSAVSGV 350
BLAST of CX289300 vs. ExPASy Swiss-Prot
Match: S47A1_HUMAN (Multidrug and toxin extrusion protein 1 OS=Homo sapiens GN=SLC47A1 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.410e-22 Identity = 60/187 (32.09%), Postives = 99/187 (52.94%), Query Frame = -2 Query: 1 YMVFSIPELLAQAVLHPIRAFLRTQGLTAPLTIAAVCAVVLHVPINYILAIHLNLGIKGVALALACNTFNLNLGLIIYVIMSKNSLKPWHGFTILSFFQGWGPLLGLAVPSCISVCLEWWWYEIMLFLCGLLSNPEACVAAMGILIQTTALLYVFPFALSCSLTTRVGHALGAGQPSRAQWTAIIGI 561 Y+ IP L A + +L QG+ P + V A +++ NY+ L+LG+ G ALA + + L L L +Y++ K W G++ L Q W L LA+PS + +C+EWW YE+ FL G+L E + A I+ + ++Y+ P S + + RVG+ALGAG +A+ ++ + + Sbjct: 157 YVTIFIPALPATFLYMLQVKYLLNQGIVLPQIVTGVAANLVNALANYLFLHQLHLGVIGSALANLISQYTLALLLFLYILGKKLHQATWGGWS-LECLQDWASFLRLAIPSMLMLCMEWWAYEVGSFLSGILGMVE--LGAQSIVYELAIIVYMVPAGFSVAASVRVGNALGAGDMEQARKSSTVSL 340
BLAST of CX289300 vs. ExPASy Swiss-Prot
Match: S47A1_RAT (Multidrug and toxin extrusion protein 1 OS=Rattus norvegicus GN=Slc47a1 PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.406e-22 Identity = 62/188 (32.98%), Postives = 101/188 (53.72%), Query Frame = -2 Query: 1 YMVFSIPELLAQAVLHPIRA-FLRTQGLTAPLTIAAVCAVVLHVPINYILAIHLNLGIKGVALALACNTFNLNLGLIIYVIMSKNSLKPWHGFTILSFFQGWGPLLGLAVPSCISVCLEWWWYEIMLFLCGLLSNPEACVAAMGILIQTTALLYVFPFALSCSLTTRVGHALGAGQPSRAQWTAIIGI 561 Y++ IP L A A L+ ++ +L QG+ P I + A +++ NY+ L+LG+ G ALA + F L + L +Y++ K W G++ Q W L LA+PS + +C+EWW YE+ FL G+L E + A I + ++Y+ P S + RVG+ALGAG +A+ ++ I + Sbjct: 156 YVMVFIPALPA-AFLYTLQVKYLLNQGIVLPQVITGIAANLVNALANYLFLHQLHLGVMGSALANTISQFALAIFLFLYILWRKLHHATWGGWS-WECLQDWASFLQLAIPSMLMLCIEWWAYEVGSFLSGILGMVE--LGAQSITYELAIIVYMIPAGFSVAANVRVGNALGAGNIDQAKKSSAISL 339 The following BLAST results are available for this feature:
BLAST of CX289300 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289300 ID=CX289300; Name=CX289300; organism=Citrus clementina; type=EST; length=565bpback to top |