CX289362

Overview
NameCX289362
Unique NameCX289362
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length242
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1960 contig Ccv1_Contig1960:54..295. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX289362 vs. ExPASy Swiss-Prot
Match: 14337_SOLLC (14-3-3 protein 7 OS=Solanum lycopersicum GN=TFT7 PE=2 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 8.795e-28
Identity = 62/67 (92.54%), Postives = 64/67 (95.52%), Query Frame = 1
Query:   40 MEKEREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSI 240
            MEKERE  VYLARLAEQAERYDEMVEAMK +AK+DVELTVEERNLVSVGYKNVIGARRASWRILSSI
Sbjct:    1 MEKEREKQVYLARLAEQAERYDEMVEAMKAIAKMDVELTVEERNLVSVGYKNVIGARRASWRILSSI 67          
BLAST of CX289362 vs. ExPASy Swiss-Prot
Match: 1433_TOBAC (14-3-3-like protein OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.500e-27
Identity = 62/67 (92.54%), Postives = 64/67 (95.52%), Query Frame = 1
Query:   40 MEKEREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSI 240
            M+KERE  VYLARLAEQAERYDEMVEAMK VAK+DVELTVEERNLVSVGYKNVIGARRASWRILSSI
Sbjct:    1 MDKEREKQVYLARLAEQAERYDEMVEAMKTVAKMDVELTVEERNLVSVGYKNVIGARRASWRILSSI 67          
BLAST of CX289362 vs. ExPASy Swiss-Prot
Match: 14310_ARATH (14-3-3-like protein GF14 epsilon OS=Arabidopsis thaliana GN=GRF10 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.270e-26
Identity = 60/67 (89.55%), Postives = 63/67 (94.03%), Query Frame = 1
Query:   40 MEKEREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSI 240
            ME ERE  VYLA+L+EQ ERYDEMVEAMKKVA+LDVELTVEERNLVSVGYKNVIGARRASWRILSSI
Sbjct:    1 MENEREKQVYLAKLSEQTERYDEMVEAMKKVAQLDVELTVEERNLVSVGYKNVIGARRASWRILSSI 67          
BLAST of CX289362 vs. ExPASy Swiss-Prot
Match: 14311_ARATH (14-3-3-like protein GF14 omicron OS=Arabidopsis thaliana GN=GRF11 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 2.395e-25
Identity = 58/67 (86.57%), Postives = 61/67 (91.04%), Query Frame = 1
Query:   40 MEKEREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSI 240
            ME ER   VYLA+L EQAERYDEMVEAMKKVA LDVELT+EERNL+SVGYKNVIGARRASWRILSSI
Sbjct:    1 MENERAKQVYLAKLNEQAERYDEMVEAMKKVAALDVELTIEERNLLSVGYKNVIGARRASWRILSSI 67          
BLAST of CX289362 vs. ExPASy Swiss-Prot
Match: 14339_SOLLC (14-3-3 protein 9 OS=Solanum lycopersicum GN=TFT9 PE=2 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 6.969e-25
Identity = 55/65 (84.62%), Postives = 62/65 (95.38%), Query Frame = 1
Query:   46 KEREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSI 240
            KERE+ VY+A+LAEQAERYDEMVEAMK VA +DVELTVEERNL+SVGYKNV+G+RRASWRILSSI
Sbjct:    5 KERENFVYVAKLAEQAERYDEMVEAMKNVANMDVELTVEERNLLSVGYKNVVGSRRASWRILSSI 69          
BLAST of CX289362 vs. ExPASy Swiss-Prot
Match: 14338_SOLLC (14-3-3 protein 8 OS=Solanum lycopersicum GN=TFT8 PE=2 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 9.102e-25
Identity = 56/65 (86.15%), Postives = 61/65 (93.85%), Query Frame = 1
Query:   46 KEREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSI 240
            KERE  VY+ARLAEQAERYDEMV+AMK VA LDVELTVEERNL+SVGYKNV+G+RRASWRILSSI
Sbjct:    5 KERESLVYIARLAEQAERYDEMVDAMKNVANLDVELTVEERNLLSVGYKNVVGSRRASWRILSSI 69          
BLAST of CX289362 vs. ExPASy Swiss-Prot
Match: 1433D_SOYBN (14-3-3-like protein D OS=Glycine max GN=GF14D PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.552e-24
Identity = 55/65 (84.62%), Postives = 62/65 (95.38%), Query Frame = 1
Query:   46 KEREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSI 240
            K+RE+ VY+A+LAEQAERY+EMVE+MK VA LDVELTVEERNL+SVGYKNVIGARRASWRILSSI
Sbjct:    5 KDRENFVYIAKLAEQAERYEEMVESMKNVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSI 69          
BLAST of CX289362 vs. ExPASy Swiss-Prot
Match: 1433C_SOYBN (14-3-3-like protein C OS=Glycine max GN=GF14C PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.028e-24
Identity = 55/65 (84.62%), Postives = 62/65 (95.38%), Query Frame = 1
Query:   46 KEREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSI 240
            KERE+ VY+A+LAEQAERY+EMVEAMK VA L+VELTVEERNL+SVGYKNV+GARRASWRILSSI
Sbjct:    5 KERENFVYVAKLAEQAERYEEMVEAMKNVANLNVELTVEERNLLSVGYKNVVGARRASWRILSSI 69          
BLAST of CX289362 vs. ExPASy Swiss-Prot
Match: 1433B_VICFA (14-3-3-like protein B OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 4.517e-24
Identity = 53/65 (81.54%), Postives = 62/65 (95.38%), Query Frame = 1
Query:   46 KEREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSI 240
            K+RE+ VY+A+LAEQAERY+EMV++MK VA LDVELT+EERNL+SVGYKNVIGARRASWRILSSI
Sbjct:    5 KDRENFVYIAKLAEQAERYEEMVDSMKNVANLDVELTIEERNLLSVGYKNVIGARRASWRILSSI 69          
BLAST of CX289362 vs. ExPASy Swiss-Prot
Match: 1433_DICDI (14-3-3-like protein OS=Dictyostelium discoideum GN=fttB PE=1 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 5.900e-24
Identity = 54/63 (85.71%), Postives = 61/63 (96.83%), Query Frame = 1
Query:   52 REHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSI 240
            RE +VY+A+LAEQAERY+EMVEAMKKVA+LDVELTVEERNL+SV YKNVIGARRASWRI+SSI
Sbjct:    3 REENVYMAKLAEQAERYEEMVEAMKKVAELDVELTVEERNLLSVAYKNVIGARRASWRIISSI 65          
The following BLAST results are available for this feature:
BLAST of CX289362 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 139
Match NameE-valueIdentityDescription
14337_SOLLC8.795e-2892.5414-3-3 protein 7 OS=Solanum lycopersicum GN=TFT7 P... [more]
1433_TOBAC1.500e-2792.5414-3-3-like protein OS=Nicotiana tabacum PE=2 SV=1[more]
14310_ARATH1.270e-2689.5514-3-3-like protein GF14 epsilon OS=Arabidopsis th... [more]
14311_ARATH2.395e-2586.5714-3-3-like protein GF14 omicron OS=Arabidopsis th... [more]
14339_SOLLC6.969e-2584.6214-3-3 protein 9 OS=Solanum lycopersicum GN=TFT9 P... [more]
14338_SOLLC9.102e-2586.1514-3-3 protein 8 OS=Solanum lycopersicum GN=TFT8 P... [more]
1433D_SOYBN1.552e-2484.6214-3-3-like protein D OS=Glycine max GN=GF14D PE=2... [more]
1433C_SOYBN2.028e-2484.6214-3-3-like protein C OS=Glycine max GN=GF14C PE=2... [more]
1433B_VICFA4.517e-2481.5414-3-3-like protein B OS=Vicia faba PE=2 SV=1[more]
1433_DICDI5.900e-2485.7114-3-3-like protein OS=Dictyostelium discoideum GN... [more]

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Properties
Property NameValue
Genbank descriptionC02012B08SK IF1 Citrus clementina cDNA clone C02012B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289362 ID=CX289362; Name=CX289362; organism=Citrus clementina; type=EST; length=242bp
AAGAGAGCTAGCGAGAGAAAGAGTGAGTGACTGAACGAAATGGAGAAGGA
GAGAGAGCATCATGTTTACTTGGCCAGACTTGCTGAGCAAGCCGAGAGAT
ACGACGAGATGGTTGAAGCCATGAAGAAAGTTGCCAAGTTGGATGTGGAA
CTGACTGTGGAGGAGAGGAATCTGGTGTCTGTTGGGTACAAGAATGTGAT
TGGGGCAAGAAGAGCATCATGGAGGATTTTGTCTTCCATTGA
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