CX289380
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX289380 vs. ExPASy Swiss-Prot
Match: JP650_ARATH (Probable polygalacturonase non-catalytic subunit JP650 OS=Arabidopsis thaliana GN=JP650 PE=2 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 1.358e-28 Identity = 61/111 (54.95%), Postives = 73/111 (65.77%), Query Frame = 2 Query: 2 KVNFANYQEDFNSVSHKFSGYGENADGQKIGFKVYGPDRSFKDYAKTGVTFAXXXXXXXXXXXXXXXXXXXXXWVEPGKFFRESMLKTGTVMPMPDIRDKMPQRSFLPRAI 334 KVNF NY + FN S F+GYG+ A+G K+ FK Y P+ +FKDYAK GV FA W+EPGKFFRES LK GTV+PMPDI+DKMP+RSFLPR+I Sbjct: 333 KVNFVNYGQSFNPGSETFTGYGKGAEGSKLSFKTYTPNSTFKDYAKKGVAFAKYNVSTTTANTVGDGKTVNK-WIEPGKFFRESSLKEGTVIPMPDIKDKMPKRSFLPRSI 442
BLAST of CX289380 vs. ExPASy Swiss-Prot
Match: JP630_ARATH (Probable polygalacturonase non-catalytic subunit JP630 OS=Arabidopsis thaliana GN=JP630 PE=2 SV=2) HSP 1 Score: 116.701 bits (291), Expect = 3.698e-26 Identity = 60/111 (54.05%), Postives = 71/111 (63.96%), Query Frame = 2 Query: 2 KVNFANYQEDFNSVSHKFSGYGENADGQKIGFKVYGPDRSFKDYAKTGVTFAXXXXXXXXXXXXXXXXXXXXXWVEPGKFFRESMLKTGTVMPMPDIRDKMPQRSFLPRAI 334 KV+F NY + N S FSGYG+ A+G KI FK Y + +FKDY KTGV FA WVEPGKFFRESMLK GT++ MPDI+DKMP+RSFLPR+I Sbjct: 334 KVDFVNYGKSINPGSESFSGYGKGAEGNKIDFKTYTQNSTFKDYTKTGVEFAKYNRSSLGGGKTVNK------WVEPGKFFRESMLKEGTLIWMPDIKDKMPKRSFLPRSI 438
BLAST of CX289380 vs. ExPASy Swiss-Prot
Match: Y639_ARATH (Probable polygalacturonase non-catalytic subunit At1g60390 OS=Arabidopsis thaliana GN=At1g60390 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.718e-23 Identity = 56/111 (50.45%), Postives = 67/111 (60.36%), Query Frame = 2 Query: 2 KVNFANYQEDFNSVSHKFSGYGENADGQKIGFKVYGPDRSFKDYAKTGVTFAXXXXXXXXXXXXXXXXXXXXXWVEPGKFFRESMLKTGTVMPMPDIRDKMPQRSFLPRAI 334 KVNF NY + FN S F+GYG++ G + FK YG +SFK Y K GV FA WVE GKFFRE+MLK GT+M MPDI+DKMP+R+FLPR I Sbjct: 336 KVNFVNYGKSFNLGSDNFTGYGQDNVGGNVSFKTYGQGQSFKVYTKDGVVFARYSNNVSSNGKTVNK------WVEEGKFFREAMLKEGTLMQMPDIKDKMPKRTFLPRNI 440
BLAST of CX289380 vs. ExPASy Swiss-Prot
Match: GP3_SOLLC (Polygalacturonase non-catalytic subunit AroGP3 OS=Solanum lycopersicum GN=GP3 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 2.244e-23 Identity = 53/115 (46.09%), Postives = 67/115 (58.26%), Query Frame = 2 Query: 2 KVNFANYQEDFNSVSHKFSGYGENADGQKIGFKVYGPDRSFKDYAKTGVTFAXXXXXXXXXXXXXXXXXXXXX----WVEPGKFFRESMLKTGTVMPMPDIRDKMPQRSFLPRAI 334 + NF NY + FN + F+ YG+ + I FK YG + +FKDY K TF+ W+EPGKFFRE MLK+GT+MPMPDI+DKMP+RSFLPRAI Sbjct: 334 EANFTNYGQSFNEGTDVFTTYGKGGNDPHINFKTYGVNNTFKDYVKDTATFSNYHNKTSQDLASLSEVNGGKKVNNRWIEPGKFFREKMLKSGTIMPMPDIKDKMPKRSFLPRAI 448
BLAST of CX289380 vs. ExPASy Swiss-Prot
Match: GP2_SOLLC (Polygalacturonase non-catalytic subunit AroGP2 OS=Solanum lycopersicum GN=GP2 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 4.998e-23 Identity = 53/115 (46.09%), Postives = 66/115 (57.39%), Query Frame = 2 Query: 2 KVNFANYQEDFNSVSHKFSGYGENADGQKIGFKVYGPDRSFKDYAKTGVTFAXXXXXXXXXXXXXXXXXXXXX----WVEPGKFFRESMLKTGTVMPMPDIRDKMPQRSFLPRAI 334 + NF NY + FN + F YG+ + I FK YG + +FKDY K TF+ W+EPGKFFRE MLK+GT+MPMPDI+DKMP+RSFLPRAI Sbjct: 331 EANFTNYGQSFNEGTDVFITYGKGGNDPHINFKTYGVNNTFKDYVKDTATFSNYHNKTSQDLASLSEVNGGKKVNNRWIEPGKFFREKMLKSGTIMPMPDIKDKMPKRSFLPRAI 445
BLAST of CX289380 vs. ExPASy Swiss-Prot
Match: GP1_SOLLC (Polygalacturonase-1 non-catalytic subunit beta OS=Solanum lycopersicum GN=GP1 PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 4.998e-23 Identity = 53/115 (46.09%), Postives = 66/115 (57.39%), Query Frame = 2 Query: 2 KVNFANYQEDFNSVSHKFSGYGENADGQKIGFKVYGPDRSFKDYAKTGVTFAXXXXXXXXXXXXXXXXXXXXX----WVEPGKFFRESMLKTGTVMPMPDIRDKMPQRSFLPRAI 334 + NF NY + FN + F+ YG+ + I FK YG + +FKDY K TF+ WVEPGKFFRE MLK+GT+MPMPDI+DKMP+RSFLPR I Sbjct: 332 EANFTNYGQSFNEGTDVFTTYGKGGNDPHINFKTYGVNNTFKDYVKDTATFSNYHNKTSQVLASLMEVNGGKKVNNRWVEPGKFFREKMLKSGTIMPMPDIKDKMPKRSFLPRVI 446
BLAST of CX289380 vs. ExPASy Swiss-Prot
Match: BURPC_ORYSJ (BURP domain-containing protein 12 OS=Oryza sativa subsp. japonica GN=BURP12 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.469e-16 Identity = 52/117 (44.44%), Postives = 62/117 (52.99%), Query Frame = 2 Query: 11 FANYQEDFNSVSHKFSGYGENAD-GQKIGFKVY-GPDRSFKDYAKTGVTF------AXXXXXXXXXXXXXXXXXXXXXWV-EPGKFFRESMLKTGTVMPMPDIRDKMPQRSFLPRAI 334 F NY FN + F GYGE ++ IGFK Y G + SFK YAK+GV F + W EPGKFFRE+ L +G MPMPDI+DKMP R+FLPR I Sbjct: 330 FQNYGGSFNPGTVTFKGYGEGSNPNHHIGFKEYAGSNNSFKGYAKSGVDFKEYHNTSSADAATTMSLEAVSSGHQHLKWSPEPGKFFRETELVSGNTMPMPDIKDKMPPRAFLPRDI 446 The following BLAST results are available for this feature:
BLAST of CX289380 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX289380 ID=CX289380; Name=CX289380; organism=Citrus clementina; type=EST; length=335bpback to top |