CX289447
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289447 vs. ExPASy Swiss-Prot
Match: FACR3_ARATH (Fatty acyl-CoA reductase 3 OS=Arabidopsis thaliana GN=FAR3 PE=2 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 1.156e-44 Identity = 87/159 (54.72%), Postives = 115/159 (72.33%), Query Frame = 2 Query: 2 DLFRVLRDTWGDSLDSFILEKVAAVPGDILYEDLGIKDSNLKEEMYRQIDLVVNVAAITKFDERYDALLDTNTMGAFHVLSFAKHCTKIQMLVHLSTAYACGEKSGLIPENSFTMGEMVKWPRKLDIMAEKKLVEKKLNQLQTTGAAEDEVTSIMKDLG 478 DLF+VL++ +G +L+ EK+ V GDI EDLG++D +L EM Q+D +VN+AA TKFDERYD L NT+GA +VL+FAK C K+++LVH+STAY CGEKSGLI E + MGE + LDI EKKLV++KL+QL+ GAA + +T MKDLG Sbjct: 70 DLFKVLKEKYGPNLNQLTSEKITIVDGDICLEDLGLQDFDLAHEMIHQVDAIVNLAATTKFDERYDVALGINTLGALNVLNFAKRCAKVKILVHVSTAYVCGEKSGLIMETPYRMGETLNGTTGLDINYEKKLVQEKLDQLRVIGAAPETITETMKDLG 228
BLAST of CX289447 vs. ExPASy Swiss-Prot
Match: FACR4_ARATH (Probable fatty acyl-CoA reductase 4 OS=Arabidopsis thaliana GN=FAR4 PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 1.012e-40 Identity = 84/160 (52.50%), Postives = 115/160 (71.88%), Query Frame = 2 Query: 2 DLFRVLRDTWGD-SLDSFILEKVAAVPGDILYEDLGIKDSNLKEEMYRQIDLVVNVAAITKFDERYDALLDTNTMGAFHVLSFAKHCTKIQMLVHLSTAYACGEKSGLIPENSFTMGEMVKWPRKLDIMAEKKLVEKKLNQLQTTGAAEDEVTSIMKDLG 478 DLFRVL++ GD +L +FI EKV +PGDI ++LG+K S+L + M+ +ID++VNVAA T FDERYD L NT G +VL+FAK C K Q+L+H+STAY GEKSGL+ E +F MGE + RKL I E +L+++KL +LQ +E+E++ MKDLG Sbjct: 65 DLFRVLKNALGDENLKAFITEKVVPIPGDISVDNLGVKGSDLLQHMWNEIDIIVNVAATTNFDERYDVGLSVNTFGPLNVLNFAKKCVKGQLLLHVSTAYVRGEKSGLLHEKTFHMGETLNGHRKLVIETEMELMKQKLKELQKQNCSEEEISQSMKDLG 224
BLAST of CX289447 vs. ExPASy Swiss-Prot
Match: FACR8_ARATH (Fatty acyl-CoA reductase 8 OS=Arabidopsis thaliana GN=FAR8 PE=2 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 6.562e-40 Identity = 85/161 (52.80%), Postives = 114/161 (70.81%), Query Frame = 2 Query: 2 DLFRVLRDTWGDS-LDSFILEKVAAVPGDILYEDLGIKDSNLKEEMYRQIDLVVNVAAITKFDERYDALLDTNTMGAFHVLSFAKHCTKIQMLVHLSTAYACGEKSGLIPENSFTMGEMV-KWPRKLDIMAEKKLVEKKLNQLQTTGAAEDEVTSIMKDLG 478 DLF+VLRD GD L++ + EKV V GDI + LG+KDSNL+E M ++ID+VVNVAA T FDERYD L NT GA +VL+FAK C K Q+L+H+STAY CGEK GL+PE F M E+ + +LDI E++L++++L +L G +E+ T MK+LG Sbjct: 65 DLFKVLRDNLGDEKLNTLLSEKVVPVAGDIAMDHLGMKDSNLRERMQKEIDIVVNVAATTNFDERYDIGLGINTFGALNVLNFAKKCVKAQLLLHVSTAYVCGEKPGLLPEKPFVMEEICNENGLQLDINLERELMKQRLKELNEQGCSEEGTTFYMKELG 225
BLAST of CX289447 vs. ExPASy Swiss-Prot
Match: FACR5_ARATH (Probable fatty acyl-CoA reductase 5 OS=Arabidopsis thaliana GN=FAR5 PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 1.462e-39 Identity = 83/161 (51.55%), Postives = 116/161 (72.05%), Query Frame = 2 Query: 2 DLFRVLRDTWGDS-LDSFILEKVAAVPGDILYEDLGIKDSNLKEEMYRQIDLVVNVAAITKFDERYDALLDTNTMGAFHVLSFAKHCTKIQMLVHLSTAYACGEKSGLIPENSFTMGEM-VKWPRKLDIMAEKKLVEKKLNQLQTTGAAEDEVTSIMKDLG 478 +LF+VLR GD L++ + EKV +VPGDI + LGI DS+L+E M ++ID+VVNVAA T FDERYD L NT GA +VL+FAK C K+Q+L+H+STAY CGEK GLIPE F M E+ + +LDI E++L++++L +L +E+++T MK+LG Sbjct: 65 ELFKVLRQNLGDEKLNTLLYEKVVSVPGDIATDQLGINDSHLRERMQKEIDIVVNVAATTNFDERYDVGLGINTFGALNVLNFAKKCVKVQLLLHVSTAYVCGEKPGLIPEKPFIMEEIRNENGLQLDINLERELMKQRLKELNEQDCSEEDITLSMKELG 225
BLAST of CX289447 vs. ExPASy Swiss-Prot
Match: FACR1_ARATH (Fatty acyl-CoA reductase 1 OS=Arabidopsis thaliana GN=FAR1 PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 5.199e-37 Identity = 77/160 (48.12%), Postives = 114/160 (71.25%), Query Frame = 2 Query: 2 DLFRVLRDTWG-DSLDSFILEKVAAVPGDILYEDLGIKDSNLKEEMYRQIDLVVNVAAITKFDERYDALLDTNTMGAFHVLSFAKHCTKIQMLVHLSTAYACGEKSGLIPENSFTMGEMVKWPRKLDIMAEKKLVEKKLNQLQTTGAAEDEVTSIMKDLG 478 DLF+VLR+ G D+L++ + EK+ VPGDI ++LG+KD++L + M+ +ID+++N+AA T FDERYD L NT GA +VL+FAK C K Q+L+H+STAY GE+ GL+ E F MGE + R+LDI E L+++KL +LQ +++E++ MKD G Sbjct: 65 DLFKVLRNNLGEDNLNALMREKIVPVPGDISIDNLGLKDTDLIQRMWSEIDIIINIAATTNFDERYDIGLGINTFGALNVLNFAKKCVKGQLLLHVSTAYISGEQPGLLLEKPFKMGETLSGDRELDINIEHDLMKQKLKELQ--DCSDEEISQTMKDFG 222
BLAST of CX289447 vs. ExPASy Swiss-Prot
Match: FACR2_ARATH (Fatty acyl-CoA reductase 2 OS=Arabidopsis thaliana GN=FAR2 PE=2 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 1.052e-21 Identity = 58/166 (34.94%), Postives = 96/166 (57.83%), Query Frame = 2 Query: 2 DLFRVLRDTWGDSLDSFILEKVAAVPGDILYEDLGIKDSNLKEEMYRQIDLVVNVAAITKFDERYDALLDTNTMGAFHVLSFAKHCTKIQMLVHLSTAYACGEKSGLIPENSFTMGEMVKWP-------RKLDIMAEKKLVEKKLNQLQTTGAAEDEVTSIMKDLG 478 +LF L++T G S SF+L K+ V G+I ++G++ ++ EE+ +++D+++N AA T F+ERYD LD NT G +++ FAK C K+++ + +STAY G++ G I E F+MG+ + + LD+ E KL + + G + MKDLG Sbjct: 184 ELFNTLKETHGASYMSFMLTKLIPVTGNICDSNIGLQ-ADSAEEIAKEVDVIINSAANTTFNERYDVALDINTRGPGNLMGFAKKCKKLKLFLQVSTAYVNGQRQGRIMEKPFSMGDCIATENFLEGNRKALDVDREMKLALEAARK----GTQNQDEAQKMKDLG 344
BLAST of CX289447 vs. ExPASy Swiss-Prot
Match: FACR7_ARATH (Putative fatty acyl-CoA reductase 7 OS=Arabidopsis thaliana GN=FAR7 PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 3.386e-20 Identity = 46/113 (40.71%), Postives = 69/113 (61.06%), Query Frame = 2 Query: 140 RQIDLVVNVAAITKFDERYDALLDTNTMGAFHVLSFAKHCTKIQMLVHLSTAYACGEKSGLIPENSFTMGEMVKWPRKLDIMAEKKLVEKKLNQLQTTGAAEDEVTSIMKDLG 478 +++ L+V + ++RYD L NT GA +VL+FAK C K ++L+H+ST Y CGE+ G I E F MGE + K+DI E++L ++K Q + G +E+E MKD G Sbjct: 39 KRLYLLVRASDKKSAEQRYDVALGINTFGAINVLNFAKKCVKPKLLLHVSTVYVCGERPGHIVEKHFAMGESLNGKNKVDINTERRLADQKSKQFKEQGCSEEETEQAMKDFG 151
BLAST of CX289447 vs. ExPASy Swiss-Prot
Match: FACR6_ARATH (Fatty acyl-CoA reductase 6, chloroplastic OS=Arabidopsis thaliana GN=FAR6 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.287e-19 Identity = 53/159 (33.33%), Postives = 92/159 (57.86%), Query Frame = 2 Query: 2 DLFRVLRDTWGDSLDSFILEKVAAVPGDILYEDLGIKDSNLKEEMYRQIDLVVNVAAITKFDERYDALLDTNTMGAFHVLSFAKHCTKIQMLVHLSTAYACGEKSGLIPENSFTMGEMVKWPRKLDIMAEKKLVEKKLNQLQTTGAAEDEVTSIMKDLG 478 DLF++L+ G S ++F+ K+ V GDI ++LGIK S + + +ID++++ T FD+RYD+ L N +G +LSF K C K+++ +H STAY G++ G + E +GE + L+I +E KL + + + + +E+ +K+LG Sbjct: 137 DLFKLLKQMHGSSYEAFMKRKLIPVIGDIEEDNLGIK-SEIANMISEEIDVIISCGGRTTFDDRYDSALSVNALGPGRLLSFGKGCRKLKLFLHFSTAYVTGKREGTVLETPLCIGENI--TSDLNIKSELKLASEAVRKFR----GREEIKK-LKELG 287 The following BLAST results are available for this feature:
BLAST of CX289447 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX289447 ID=CX289447; Name=CX289447; organism=Citrus clementina; type=EST; length=480bpback to top |