CX289484

Overview
NameCX289484
Unique NameCX289484
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length243
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14593 contig Ccv1_Contig14593:90..332. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX289484 vs. ExPASy Swiss-Prot
Match: DHAR1_ARATH (Glutathione S-transferase DHAR1, mitochondrial OS=Arabidopsis thaliana GN=DHAR1 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 6.486e-31
Identity = 61/74 (82.43%), Postives = 67/74 (90.54%), Query Frame = 1 
Query:   22 MAVEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFLETSPEGKVPVVKFDDKWVADSD 243
            MA+EICVKAAVGAPD LGDCPFSQRALLTLEEK + YK HLIN+SDKPQWFL+ SP+GKVPV+K DDKWV DSD
Sbjct:    1 MALEICVKAAVGAPDHLGDCPFSQRALLTLEEKSLTYKIHLINLSDKPQWFLDISPQGKVPVLKIDDKWVTDSD 74
The following BLAST results are available for this feature:
BLAST of CX289484 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
DHAR1_ARATH6.486e-3182.43Glutathione S-transferase DHAR1, mitochondrial OS=... [more]
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Properties
Property NameValue
Genbank descriptionC02013G09SK IF1 Citrus clementina cDNA clone C02013G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289484 ID=CX289484; Name=CX289484; organism=Citrus clementina; type=EST; length=243bp
TGATCACTCAATTCCGCAAAAATGGCCGTGGAGATTTGTGTGAAAGCCGC
TGTTGGCGCTCCTGATATTCTCGGGGACTGCCCATTTTCCCAAAGAGCTT
TGCTTACTTTGGAGGAAAAGAAAGTTCCATACAAGCGTCACCTCATCAAT
ATCAGTGACAAGCCTCAATGGTTTTTGGAGACAAGCCCAGAAGGGAAAGT
ACCTGTGGTAAAGTTTGATGACAAGTGGGTGGCTGACTCTGAT
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