CX289502

Overview
NameCX289502
Unique NameCX289502
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length393
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289502 vs. ExPASy Swiss-Prot
Match: PPA27_ARATH (Probable inactive purple acid phosphatase 27 OS=Arabidopsis thaliana GN=PAP27 PE=2 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 2.361e-65
Identity = 110/130 (84.62%), Postives = 119/130 (91.54%), Query Frame = 2
Query:    2 EPIASTVPYMIGSGNHERDWPNSGSFYDTTDSGGECGVPAETMFYVPAENRAKFWYSTDYGMFHFCIADTEHDWREGSEQYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFQEPMGRESL 391
            EPIASTVPYM+ SGNHERDWP+SGSFY   DSGGECGVPAETMF  PAEN+AKFWYS DYGMF FC+ADTEHDWREGSEQY+FIE+CLASVDRR QPWLIF AHRVLGYS++ WYGQEGSF+EPMGRESL
Sbjct:  353 EPIASTVPYMVASGNHERDWPDSGSFYGGKDSGGECGVPAETMFDFPAENKAKFWYSADYGMFRFCVADTEHDWREGSEQYQFIERCLASVDRRAQPWLIFIAHRVLGYSTNDWYGQEGSFEEPMGRESL 482          
BLAST of CX289502 vs. ExPASy Swiss-Prot
Match: PPA1_ARATH (Probable inactive purple acid phosphatase 1 OS=Arabidopsis thaliana GN=PAP1 PE=1 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 8.970e-65
Identity = 110/130 (84.62%), Postives = 118/130 (90.77%), Query Frame = 2
Query:    2 EPIASTVPYMIGSGNHERDWPNSGSFYDTTDSGGECGVPAETMFYVPAENRAKFWYSTDYGMFHFCIADTEHDWREGSEQYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFQEPMGRESL 391
            EPIASTVPYMI SGNHER WPNSGSFY+  DSGGECGVPAETMFYVPA+NRAK WYS+DYGMF FC+ADTEHDWREG+EQY FIE CLASVDR+KQPWLIF AHRVLGYSS Y+Y +EGSF EPMGRESL
Sbjct:  355 EPIASTVPYMIASGNHERVWPNSGSFYEGLDSGGECGVPAETMFYVPAQNRAKVWYSSDYGMFRFCVADTEHDWREGTEQYNFIEHCLASVDRQKQPWLIFLAHRVLGYSSTYFYAEEGSFAEPMGRESL 484          
BLAST of CX289502 vs. ExPASy Swiss-Prot
Match: PPA24_ARATH (Probable inactive purple acid phosphatase 24 OS=Arabidopsis thaliana GN=PAP24 PE=2 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 1.172e-64
Identity = 106/130 (81.54%), Postives = 120/130 (92.31%), Query Frame = 2
Query:    2 EPIASTVPYMIGSGNHERDWPNSGSFYDTTDSGGECGVPAETMFYVPAENRAKFWYSTDYGMFHFCIADTEHDWREGSEQYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFQEPMGRESL 391
            +PIASTVPYMI SGNHERDWP++GSFY  TDSGGECGVPAETMFY PAENRAKFWY TDYGMF FC+AD+EHDWREG+EQY+FIE CLA+VDR+ QPWLIF AHRVLGYS++ WYG+EG+F+EPMGRESL
Sbjct:  357 QPIASTVPYMIASGNHERDWPDTGSFYAGTDSGGECGVPAETMFYFPAENRAKFWYKTDYGMFRFCVADSEHDWREGTEQYKFIENCLATVDRKTQPWLIFIAHRVLGYSTNDWYGKEGTFEEPMGRESL 486          
BLAST of CX289502 vs. ExPASy Swiss-Prot
Match: NPP_HORVU (Nucleotide pyrophosphatase/phosphodiesterase (Fragments) OS=Hordeum vulgare GN=npp PE=1 SV=2)

HSP 1 Score: 224.172 bits (570), Expect = 1.639e-58
Identity = 93/129 (72.09%), Postives = 110/129 (85.27%), Query Frame = 2
Query:    5 PIASTVPYMIGSGNHERDWPNSGSFYDTTDSGGECGVPAETMFYVPAENRAKFWYSTDYGMFHFCIADTEHDWREGSEQYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSDYWYGQEGSFQEPMGRESL 391
            PI++  PYM+ SGNHERDWPN+G F+D  DSGGECGVPAETM+Y PAENRA FWY  DYGMF FC+ D+EHDWREG+ QY+FIE+CL++VDR+ QPWLIF AHRVLGYSS+ WY  +GSF+EP GRESL
Sbjct:  111 PISAKKPYMVASGNHERDWPNTGGFFDVKDSGGECGVPAETMYYYPAENRANFWYKVDYGMFRFCVGDSEHDWREGTPQYKFIEECLSTVDRKHQPWLIFTAHRVLGYSSNSWYADQGSFEEPEGRESL 239          
BLAST of CX289502 vs. ExPASy Swiss-Prot
Match: PPA9_ARATH (Probable inactive purple acid phosphatase 9 OS=Arabidopsis thaliana GN=PAP9 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.823e-18
Identity = 48/122 (39.34%), Postives = 63/122 (51.64%), Query Frame = 2
Query:    2 EPIASTVPYMIGSGNHERDWPNS------GSFYDTTDSGGECGVPAETMFYVPAENRA-----------KFWYSTDYGMFHFCIADTEHDWREGSEQYRFIEQCLASVDRRKQPWLIFAAHR 316
            EPIAS VPY +  GNHE DWPN        ++    DSGGECGVP    F +P  +               +YS D G  HF    TE D+ +G +QY F++  L SV+R K P+++   HR
Sbjct:  324 EPIASKVPYHVCIGNHEYDWPNQPWKPDWAAYVYGKDSGGECGVPYSVKFNMPGNSTEATGMVKGPQSRNLYYSYDMGSVHFVYISTETDFLKGGKQYSFLKSDLESVNRSKTPFVVVQGHR 445          
BLAST of CX289502 vs. ExPASy Swiss-Prot
Match: PPA2_ARATH (Probable inactive purple acid phosphatase 2 OS=Arabidopsis thaliana GN=PAP2 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.552e-16
Identity = 48/128 (37.50%), Postives = 67/128 (52.34%), Query Frame = 2
Query:    2 EPIASTVPYMIGSGNHERDW------PNSGSFYDTTDSGGECGVPAETMFYVPAENRAK----------FWYSTDYGMFHFCIADTEHDWREGSEQYRFIEQCLASVDRRKQPWLIFAAHRVLGYSSD 337
            EPIASTVPY +  GNHE D+      P+  +     D GGECGVP    F +P  +              +YS D G  HF    TE ++ +G  QY FI++ L SVDR+K P+++   HR +  +S+
Sbjct:  325 EPIASTVPYHVCIGNHEYDFSTQPWKPDWAASIYGNDGGGECGVPYSLKFNMPGNSSESTGMKAPPTRNLYYSYDMGTVHFVYISTETNFLKGGSQYEFIKRDLESVDRKKTPFVVVQGHRPMYTTSN 452          
The following BLAST results are available for this feature:
BLAST of CX289502 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
PPA27_ARATH2.361e-6584.62Probable inactive purple acid phosphatase 27 OS=Ar... [more]
PPA1_ARATH8.970e-6584.62Probable inactive purple acid phosphatase 1 OS=Ara... [more]
PPA24_ARATH1.172e-6481.54Probable inactive purple acid phosphatase 24 OS=Ar... [more]
NPP_HORVU1.639e-5872.09Nucleotide pyrophosphatase/phosphodiesterase (Frag... [more]
PPA9_ARATH4.823e-1839.34Probable inactive purple acid phosphatase 9 OS=Ara... [more]
PPA2_ARATH1.552e-1637.50Probable inactive purple acid phosphatase 2 OS=Ara... [more]
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Properties
Property NameValue
Genbank descriptionC02014A07SK IF1 Citrus clementina cDNA clone C02014A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289502 ID=CX289502; Name=CX289502; organism=Citrus clementina; type=EST; length=393bp
GGAGCCCATTGCATCAACTGTGCCATACATGATTGGAAGCGGTAATCATG
AACGTGATTGGCCAAATTCAGGATCCTTTTATGACACTACTGATTCAGGT
GGGGAATGTGGTGTGCCGGCAGAGACCATGTTTTATGTCCCCGCTGAGAA
CAGAGCGAAGTTTTGGTATTCAACTGATTATGGCATGTTTCACTTCTGCA
TAGCTGACACTGAGCATGATTGGAGGGAGGGATCTGAACAATATAGGTTC
ATTGAGCAATGCCTTGCTTCTGTGGACAGACGGAAGCAGCCTTGGCTTAT
CTTTGCTGCTCATCGCGTACTTGGGTATTCCTCCGACTATTGGTATGGGC
AGGAAGGCTCATTTCAAGAACCCATGGGAAGGGAAAGTTTGCA
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