CX289574

Overview
NameCX289574
Unique NameCX289574
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length487
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15417 contig Ccv1_Contig15417:547..1033. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX289574 vs. ExPASy Swiss-Prot
Match: EF2_BETVU (Elongation factor 2 OS=Beta vulgaris PE=2 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 1.886e-82
Identity = 149/160 (93.12%), Postives = 152/160 (95.00%), Query Frame = 2 
Query:    8 AGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRK 487
            AGFQWASKEGALAEENMRGICFEVCDVVLH DAIHRGGGQ+IPTARRV YASQLTAKPRLLEPVYLVEIQAPE ALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRA+TSGQAFPQCVFDHW+MM SDPLE GSQAS LV  IRK
Sbjct:  666 AGFQWASKEGALAEENMRGICFEVCDVVLHTDAIHRGGGQIIPTARRVFYASQLTAKPRLLEPVYLVEIQAPENALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRASTSGQAFPQCVFDHWEMMPSDPLEAGSQASTLVSVIRK 825
[Close]
BLAST of CX289574 vs. ExPASy Swiss-Prot
Match: EF2_CHLKE (Elongation factor 2 OS=Chlorella kessleri PE=2 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 1.309e-75
Identity = 132/160 (82.50%), Postives = 149/160 (93.12%), Query Frame = 2 
Query:    8 AGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRK 487
            A FQWASKEG LAEENMRGI FEVCDVVLHADAIHRGGGQ+IPTARR +YA+QLTA+PRLLEPVYLVEIQ PEQA+GG+YSVLNQKRG VFEE+QRPGTP++N+KAYLPV+ESFGF+STLRAAT+GQAFPQCVFDHW+ M SDP + GSQA+ LV+DIRK
Sbjct:  668 AAFQWASKEGVLAEENMRGIVFEVCDVVLHADAIHRGGGQIIPTARRSMYAAQLTAQPRLLEPVYLVEIQCPEQAMGGVYSVLNQKRGMVFEELQRPGTPIFNLKAYLPVIESFGFTSTLRAATAGQAFPQCVFDHWEAMGSDPTQVGSQANTLVMDIRK 827
[Close]
BLAST of CX289574 vs. ExPASy Swiss-Prot
Match: EF2_CAEEL (Elongation factor 2 OS=Caenorhabditis elegans GN=eft-2 PE=2 SV=4)

HSP 1 Score: 243.817 bits (621), Expect = 3.025e-64
Identity = 114/160 (71.25%), Postives = 136/160 (85.00%), Query Frame = 2 
Query:    8 AGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRK 487
            AGFQWA++EG L++ENMRG+ F V DV LHADAIHRGGGQ+IPTARRV YAS LTA+PRLLEPVYLVEIQ PE A+GGIY VLN++RGHVFEE Q  GTP++ +KAYLPV ESFGF++ LR+ T GQAFPQCVFDHW ++  DPLE G++ +Q+VLD RK
Sbjct:  675 AGFQWATREGVLSDENMRGVRFNVHDVTLHADAIHRGGGQIIPTARRVFYASVLTAEPRLLEPVYLVEIQCPEAAVGGIYGVLNRRRGHVFEESQVTGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPLEAGTKPNQIVLDTRK 834
[Close]
BLAST of CX289574 vs. ExPASy Swiss-Prot
Match: EF2_RAT (Elongation factor 2 OS=Rattus norvegicus GN=Eef2 PE=1 SV=4)

HSP 1 Score: 240.736 bits (613), Expect = 2.561e-63
Identity = 112/160 (70.00%), Postives = 134/160 (83.75%), Query Frame = 2 
Query:    8 AGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRK 487
            AGFQWA+KEGAL EENMRG+ F+V DV LHADAIHRGGGQ+IPTARR +YAS LTA+PRL+EP+YLVEIQ PEQ +GGIY VLN+KRGHVFEE Q  GTP++ +KAYLPV ESFGF++ LR+ T GQAFPQCVFDHW ++  DP +  S+ SQ+V + RK
Sbjct:  681 AGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNSSRPSQVVAETRK 840
[Close]
BLAST of CX289574 vs. ExPASy Swiss-Prot
Match: EF2_PONAB (Elongation factor 2 OS=Pongo abelii GN=EEF2 PE=2 SV=3)

HSP 1 Score: 240.736 bits (613), Expect = 2.561e-63
Identity = 112/160 (70.00%), Postives = 134/160 (83.75%), Query Frame = 2 
Query:    8 AGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRK 487
            AGFQWA+KEGAL EENMRG+ F+V DV LHADAIHRGGGQ+IPTARR +YAS LTA+PRL+EP+YLVEIQ PEQ +GGIY VLN+KRGHVFEE Q  GTP++ +KAYLPV ESFGF++ LR+ T GQAFPQCVFDHW ++  DP +  S+ SQ+V + RK
Sbjct:  681 AGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNSSRPSQVVAETRK 840
[Close]
BLAST of CX289574 vs. ExPASy Swiss-Prot
Match: EF2_MOUSE (Elongation factor 2 OS=Mus musculus GN=Eef2 PE=1 SV=2)

HSP 1 Score: 240.736 bits (613), Expect = 2.561e-63
Identity = 112/160 (70.00%), Postives = 134/160 (83.75%), Query Frame = 2 
Query:    8 AGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRK 487
            AGFQWA+KEGAL EENMRG+ F+V DV LHADAIHRGGGQ+IPTARR +YAS LTA+PRL+EP+YLVEIQ PEQ +GGIY VLN+KRGHVFEE Q  GTP++ +KAYLPV ESFGF++ LR+ T GQAFPQCVFDHW ++  DP +  S+ SQ+V + RK
Sbjct:  681 AGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNSSRPSQVVAETRK 840
[Close]
BLAST of CX289574 vs. ExPASy Swiss-Prot
Match: EF2_MESAU (Elongation factor 2 OS=Mesocricetus auratus GN=EEF2 PE=2 SV=3)

HSP 1 Score: 240.736 bits (613), Expect = 2.561e-63
Identity = 112/160 (70.00%), Postives = 134/160 (83.75%), Query Frame = 2 
Query:    8 AGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRK 487
            AGFQWA+KEGAL EENMRG+ F+V DV LHADAIHRGGGQ+IPTARR +YAS LTA+PRL+EP+YLVEIQ PEQ +GGIY VLN+KRGHVFEE Q  GTP++ +KAYLPV ESFGF++ LR+ T GQAFPQCVFDHW ++  DP +  S+ SQ+V + RK
Sbjct:  681 AGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNSSRPSQVVAETRK 840
[Close]
BLAST of CX289574 vs. ExPASy Swiss-Prot
Match: EF2_HUMAN (Elongation factor 2 OS=Homo sapiens GN=EEF2 PE=1 SV=4)

HSP 1 Score: 240.736 bits (613), Expect = 2.561e-63
Identity = 112/160 (70.00%), Postives = 134/160 (83.75%), Query Frame = 2 
Query:    8 AGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRK 487
            AGFQWA+KEGAL EENMRG+ F+V DV LHADAIHRGGGQ+IPTARR +YAS LTA+PRL+EP+YLVEIQ PEQ +GGIY VLN+KRGHVFEE Q  GTP++ +KAYLPV ESFGF++ LR+ T GQAFPQCVFDHW ++  DP +  S+ SQ+V + RK
Sbjct:  681 AGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNSSRPSQVVAETRK 840
[Close]
BLAST of CX289574 vs. ExPASy Swiss-Prot
Match: EF2_CALJA (Elongation factor 2 OS=Callithrix jacchus GN=EEF2 PE=2 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 4.368e-63
Identity = 112/160 (70.00%), Postives = 134/160 (83.75%), Query Frame = 2 
Query:    8 AGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRK 487
            AGFQWA+KEGAL EENMRG+ F+V DV LHADAIHRGGGQ+IPTARR +YAS LTA+PRL+EP+YLVEIQ PEQ +GGIY VLN+KRGHVFEE Q  GTP++ +KAYLPV ESFGF++ LR+ T GQAFPQCVFDHW ++  DP +  S+ SQ+V + RK
Sbjct:  681 AGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNTSRPSQVVAETRK 840
[Close]
BLAST of CX289574 vs. ExPASy Swiss-Prot
Match: EF2_BOVIN (Elongation factor 2 OS=Bos taurus GN=EEF2 PE=2 SV=3)

HSP 1 Score: 239.965 bits (611), Expect = 4.368e-63
Identity = 112/160 (70.00%), Postives = 134/160 (83.75%), Query Frame = 2 
Query:    8 AGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQASQLVLDIRK 487
            AGFQWA+KEGAL EENMRG+ F+V DV LHADAIHRGGGQ+IPTARR +YAS LTA+PRL+EP+YLVEIQ PEQ +GGIY VLN+KRGHVFEE Q  GTP++ +KAYLPV ESFGF++ LR+ T GQAFPQCVFDHW ++  DP +  S+ SQ+V + RK
Sbjct:  681 AGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEETQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNTSRPSQVVAETRK 840
The following BLAST results are available for this feature:
BLAST of CX289574 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 115
Match NameE-valueIdentityDescription
EF2_BETVU1.886e-8293.13Elongation factor 2 OS=Beta vulgaris PE=2 SV=1[more]
EF2_CHLKE1.309e-7582.50Elongation factor 2 OS=Chlorella kessleri PE=2 SV=... [more]
EF2_CAEEL3.025e-6471.25Elongation factor 2 OS=Caenorhabditis elegans GN=e... [more]
EF2_RAT2.561e-6370.00Elongation factor 2 OS=Rattus norvegicus GN=Eef2 P... [more]
EF2_PONAB2.561e-6370.00Elongation factor 2 OS=Pongo abelii GN=EEF2 PE=2 S... [more]
EF2_MOUSE2.561e-6370.00Elongation factor 2 OS=Mus musculus GN=Eef2 PE=1 S... [more]
EF2_MESAU2.561e-6370.00Elongation factor 2 OS=Mesocricetus auratus GN=EEF... [more]
EF2_HUMAN2.561e-6370.00Elongation factor 2 OS=Homo sapiens GN=EEF2 PE=1 S... [more]
EF2_CALJA4.368e-6370.00Elongation factor 2 OS=Callithrix jacchus GN=EEF2 ... [more]
EF2_BOVIN4.368e-6370.00Elongation factor 2 OS=Bos taurus GN=EEF2 PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionC02014G11SK IF1 Citrus clementina cDNA clone C02014G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289574 ID=CX289574; Name=CX289574; organism=Citrus clementina; type=EST; length=487bp
GCACGAGGCTGGGTTCCAGTGGGCATCAAAGGAAGGTGCATTGGCTGAAG
AAAACATGAGGGGCATTTGCTTTGAAGTTTGTGATGTGGTTCTTCATGCC
GATGCTATCCACAGAGGTGGTGGCCAGGTTATTCCAACTGCTAGAAGGGT
CATTTATGCATCCCAGCTTACAGCCAAACCAAGGCTTCTTGAGCCTGTCT
ACTTGGTGGAAATCCAAGCTCCTGAACAGGCACTTGGTGGTATTTACAGT
GTTCTTAACCAGAAACGTGGTCACGTTTTTGAGGAGATGCAGAGACCTGG
TACCCCACTTTATAACATCAAGGCATACCTCCCGGTCGTTGAGTCTTTTG
GATTTTCCAGCACTTTGAGAGCTGCAACCTCTGGACAGGCATTCCCTCAA
TGTGTGTTTGATCACTGGGACATGATGTCATCTGATCCATTGGAGCCGGG
ATCCCAGGCTTCACAACTTGTTTTGGATATTAGGAAG
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