CX289737

Overview
NameCX289737
Unique NameCX289737
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length676
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289737 vs. ExPASy Swiss-Prot
Match: SGPL_ARATH (Sphingosine-1-phosphate lyase OS=Arabidopsis thaliana GN=At1g27980 PE=2 SV=1)

HSP 1 Score: 393.66 bits (1010), Expect = 4.802e-109
Identity = 186/225 (82.67%), Postives = 206/225 (91.56%), Query Frame = 1
Query:    1 ELGELALSHGMCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHVAVVDVFLRDLRESVETVKQNPGPANGSLAPIYG 675
            ELG+LALS+G+C HVDLCLGGFVLPFA+KLGY IPPFDFSVQGVTSISVDVHKYGLAPKGTS VLYRN EIRKHQFVAVTEWSGGLYVSPT+AGSRPG L+AGAWAA+MSLG+EGYL+NT  IME S+ +++G++EI ELF+IG+PDMTIVAFGS  +DIFEVNDIMSSKGWHLN LQRPNSIHIC+TLQHV VVD FLRDLRE+VETVK NPGP  G LAPIYG
Sbjct:  297 ELGQLALSYGICFHVDLCLGGFVLPFARKLGYQIPPFDFSVQGVTSISVDVHKYGLAPKGTSTVLYRNHEIRKHQFVAVTEWSGGLYVSPTIAGSRPGSLVAGAWAAMMSLGEEGYLQNTSKIMEASKRLEEGVREIHELFVIGKPDMTIVAFGSKALDIFEVNDIMSSKGWHLNALQRPNSIHICITLQHVPVVDDFLRDLREAVETVKANPGPITGGLAPIYG 521          
BLAST of CX289737 vs. ExPASy Swiss-Prot
Match: SGPL_ORYSJ (Sphingosine-1-phosphate lyase OS=Oryza sativa subsp. japonica GN=SPL PE=2 SV=2)

HSP 1 Score: 369.392 bits (947), Expect = 9.699e-102
Identity = 173/225 (76.89%), Postives = 199/225 (88.44%), Query Frame = 1
Query:    1 ELGELALSHGMCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHVAVVDVFLRDLRESVETVKQNPGPANGSLAPIYG 675
            ELGELA  + +CLHVDLCLGGFVLPFA+KLGYPIPPFDF V+GVTSIS DVHKYGLAPKGTS+VLY+N EIRK  F +VTEW+GGLYVSPT+AGSRPGGLIAGAWAA+ SLG  GY+ENT  IMEVS+ IQ+GI++IP LF+IG+PDMT+VAFGSD VDIFEVNDIMSSKGWHLN LQRPNS+HICVTLQH  + + FL+DL++SV+TVK NPGP +G  APIYG
Sbjct:  292 ELGELASRYDICLHVDLCLGGFVLPFARKLGYPIPPFDFCVKGVTSISTDVHKYGLAPKGTSIVLYKNHEIRKPYFFSVTEWTGGLYVSPTIAGSRPGGLIAGAWAAMTSLGLNGYMENTGHIMEVSKKIQRGIEDIPGLFVIGKPDMTVVAFGSDSVDIFEVNDIMSSKGWHLNALQRPNSLHICVTLQHTVIYEEFLKDLKDSVDTVKANPGPISGGRAPIYG 516          
BLAST of CX289737 vs. ExPASy Swiss-Prot
Match: SGPL_DICDI (Sphingosine-1-phosphate lyase OS=Dictyostelium discoideum GN=sglA PE=2 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 8.576e-66
Identity = 119/227 (52.42%), Postives = 163/227 (71.81%), Query Frame = 1
Query:    1 ELGELALSHGMCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHVAVVDVFLRDLRESVETVKQNPG--PANGSLAPIYG 675
            E+ +LA  + +  HVD CLGGF+LPFA+KL Y IP FDF + GVTS+SVD HK+G A KGTSVVL+ N+++R+  +     W GG+Y SPT+ GSRPGGL+A  WA+L+S+G +G+LE  K +ME ++ I KG++ I  + IIG P   +VAF  D  +IF VND MS KGWHLN LQRPNS+H+CVT + + +  +F+ DL++S++ VK N G  P +G+ APIYG
Sbjct:  272 EIAKLAQQYDIGCHVDACLGGFILPFAEKLDYDIPVFDFRIPGVTSMSVDTHKFGYAAKGTSVVLFGNKKLRRAMYFVAPNWPGGIYASPTLPGSRPGGLVAACWASLVSMGNDGFLEKAKGVMETTKKIIKGLQSINGVKIIGDPKAMVVAFTCD--NIFYVNDYMSKKGWHLNALQRPNSLHVCVTAKMIGMESLFIEDLKDSIKLVKDNSGSLPKDGT-APIYG 495          
BLAST of CX289737 vs. ExPASy Swiss-Prot
Match: SGPL1_RAT (Sphingosine-1-phosphate lyase 1 OS=Rattus norvegicus GN=Sgpl1 PE=2 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.159e-62
Identity = 111/228 (48.68%), Postives = 159/228 (69.74%), Query Frame = 1
Query:    1 ELGELALSHGMCLHVDLCLGGFVLPFAKKLGYPIP-PFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHV--AVVDVFLRDLRESVETVKQNPGPANGSLAPIYG 675
            E+ +LA+ + +  HVD CLGGF++ F +K GYP+  PFDF V+GVTSIS D HKYG APKG+SVV+Y N + RK+QF    +W GG+Y SP++AGSRPGG+IA  WAALM  G+ GY+E TK I++ +  ++  ++ I  +FI+G P ++++A GS+  DI+ ++++MS+KGW+ N LQ P SIH C+TL H    V   FL+D+RESV  + +NP      +  IYG
Sbjct:  300 EVAKLAVKYKIPFHVDACLGGFLIVFMEKAGYPLEKPFDFRVKGVTSISADTHKYGYAPKGSSVVMYSNEKYRKYQFFVDADWQGGIYASPSIAGSRPGGIIAACWAALMHFGENGYVEATKQIIKTARFLKSELENIKNIFILGDPQLSVIALGSNDFDIYRLSNMMSAKGWNFNYLQFPRSIHFCITLVHTRKRVAIQFLKDIRESVTQIMKNPKAKTTGMGAIYG 527          
BLAST of CX289737 vs. ExPASy Swiss-Prot
Match: SGPL1_MOUSE (Sphingosine-1-phosphate lyase 1 OS=Mus musculus GN=Sgpl1 PE=2 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 5.752e-62
Identity = 111/228 (48.68%), Postives = 158/228 (69.30%), Query Frame = 1
Query:    1 ELGELALSHGMCLHVDLCLGGFVLPFAKKLGYPIP-PFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHV--AVVDVFLRDLRESVETVKQNPGPANGSLAPIYG 675
            E+ +LA+ + + LHVD CLGGF++ F +K GYP+  PFDF V+GVTSIS D HKYG APKG+SVV+Y N + R +QF    +W GG+Y SP++AGSRPGG+IA  WAALM  G+ GY+E TK I++ +  ++  ++ I  +FI G P ++++A GS+  DI+ ++++MS+KGW+ N LQ P SIH C+TL H    V   FL+D+RESV  + +NP      +  IYG
Sbjct:  300 EVAKLAVRYKIPLHVDACLGGFLIVFMEKAGYPLEKPFDFRVKGVTSISADTHKYGYAPKGSSVVMYSNEKYRTYQFFVGADWQGGVYASPSIAGSRPGGIIAACWAALMHFGENGYVEATKQIIKTARFLKSELENIKNIFIFGDPQLSVIALGSNDFDIYRLSNMMSAKGWNFNYLQFPRSIHFCITLVHTRKRVAIQFLKDIRESVTQIMKNPKAKTTGMGAIYG 527          
BLAST of CX289737 vs. ExPASy Swiss-Prot
Match: SGPL1_HUMAN (Sphingosine-1-phosphate lyase 1 OS=Homo sapiens GN=SGPL1 PE=1 SV=3)

HSP 1 Score: 237.269 bits (604), Expect = 5.752e-62
Identity = 110/228 (48.25%), Postives = 159/228 (69.74%), Query Frame = 1
Query:    1 ELGELALSHGMCLHVDLCLGGFVLPFAKKLGYPIP-PFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHV--AVVDVFLRDLRESVETVKQNPGPANGSLAPIYG 675
            E+ +LA+ + + LHVD CLGGF++ F +K GYP+  PFDF V+GVTSIS D HKYG APKG+S+VLY +++ R +QF   T+W GG+Y SPT+AGSRPGG+ A  WAALM  G+ GY+E TK I++ +  ++  ++ I  +F+ G P ++++A GS   DI+ ++++M++KGW+LN LQ P SIH C+TL H    V   FL+D+RESV  + +NP      +  IYG
Sbjct:  300 EVAKLAVKYKIPLHVDACLGGFLIVFMEKAGYPLEHPFDFRVKGVTSISADTHKYGYAPKGSSLVLYSDKKYRNYQFFVDTDWQGGIYASPTIAGSRPGGISAACWAALMHFGENGYVEATKQIIKTARFLKSELENIKGIFVFGNPQLSVIALGSRDFDIYRLSNLMTAKGWNLNQLQFPPSIHFCITLLHARKRVAIQFLKDIRESVTQIMKNPKAKTTGMGAIYG 527          
BLAST of CX289737 vs. ExPASy Swiss-Prot
Match: SGPL1_PONAB (Sphingosine-1-phosphate lyase 1 OS=Pongo abelii GN=SGPL1 PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.281e-61
Identity = 110/228 (48.25%), Postives = 158/228 (69.30%), Query Frame = 1
Query:    1 ELGELALSHGMCLHVDLCLGGFVLPFAKKLGYPIP-PFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHV--AVVDVFLRDLRESVETVKQNPGPANGSLAPIYG 675
            E+ +LA+ + + LHVD CLGGF+  F +K GYP+  PFDF V+GVTSIS D HKYG APKG+S+VLY +++ R +QF   T+W GG+Y SPT+AGSRPGG+ A  WAALM  G+ GY+E TK I++ +  ++  ++ I  +F+ G P ++++A GS   DI+ ++++M++KGW+LN LQ P SIH C+TL H    V   FL+D+RESV  + +NP      +  IYG
Sbjct:  300 EVAKLAVKYKIPLHVDACLGGFLTVFMEKAGYPLEHPFDFRVKGVTSISADTHKYGYAPKGSSLVLYSDKKYRNYQFFVDTDWQGGIYASPTIAGSRPGGISAACWAALMHFGENGYVEATKQIIKTARFLKSELENIKGIFVFGNPQLSVIALGSRDFDIYRLSNLMTAKGWNLNQLQFPPSIHFCITLLHARKRVAIQFLKDIRESVTQIMKNPKAKTTGMGAIYG 527          
BLAST of CX289737 vs. ExPASy Swiss-Prot
Match: SGPL_DROME (Sphingosine-1-phosphate lyase OS=Drosophila melanogaster GN=Sply PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 2.672e-59
Identity = 106/227 (46.70%), Postives = 153/227 (67.40%), Query Frame = 1
Query:    4 LGELALSHGMCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHV--AVVDVFLRDLRESVETVKQNPG-PANGSLAPIYG 675
            +  L + + + +HVD CLG FV+   +  GY + PFDF V+GVTSIS D HKYG APKG+SV+LY +++ + HQF   T+W GG+Y SPTV GSR GG+IA  WA +MS G +GYLE TK I++ +  I++G+++I  +FI G+P  +++A GS+V DIF ++D +   GW+LN LQ P+ IH+CVT  H    V D F+ D+R     + ++PG P  G +A +YG
Sbjct:  291 IAALGVKYDIPVHVDACLGSFVVALVRNAGYKLRPFDFEVKGVTSISADTHKYGFAPKGSSVILYSDKKYKDHQFTVTTDWPGGVYGSPTVNGSRAGGIIAACWATMMSFGYDGYLEATKRIVDTARYIERGVRDIDGIFIFGKPATSVIALGSNVFDIFRLSDSLCKLGWNLNALQFPSGIHLCVTDMHTQPGVADKFIADVRSCTAEIMKDPGQPVVGKMA-LYG 516          
BLAST of CX289737 vs. ExPASy Swiss-Prot
Match: SGPL_YEAST (Sphingosine-1-phosphate lyase OS=Saccharomyces cerevisiae GN=DPL1 PE=1 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 6.375e-53
Identity = 100/228 (43.86%), Postives = 151/228 (66.23%), Query Frame = 1
Query:    4 LGELALSHGMCLHVDLCLGGFVLPFAKKLGYP-IPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKE-IPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHVAVVDVFLRDLRESVETVK--QNPGPANGSLAPIYG 675
            LG++A  + + LHVD CLG F++ F +K GY  +P  DF V GVTSIS D HKYG APKG+SV++YRN ++R HQ+     W+GGLY SPT+AGSRPG ++ G WA ++++G+ GY+E+ + I+  +   +K I+E IP+L I+G P  ++++F S  ++I E++D +S KGWH N LQ+P ++H+  T     VVD     LR +V+ +K   N  P+    + +YG
Sbjct:  328 LGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYGFAPKGSSVIMYRNSDLRMHQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMGENGYIESCQEIVGAAMKFKKYIQENIPDLNIMGNPRYSVISFSSKTLNIHELSDRLSKKGWHFNALQKPVALHMAFTRLSAHVVDEICDILRTTVQELKSESNSKPSPDGTSALYG 555          
BLAST of CX289737 vs. ExPASy Swiss-Prot
Match: SGPL_CAEEL (Sphingosine-1-phosphate lyase OS=Caenorhabditis elegans GN=spl-1 PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.507e-49
Identity = 96/228 (42.11%), Postives = 146/228 (64.04%), Query Frame = 1
Query:    1 ELGELALSHGMCLHVDLCLGGFVLPFAKKLGYPIPPFDFSVQGVTSISVDVHKYGLAPKGTSVVLYRNREIRKHQFVAVTEWSGGLYVSPTVAGSRPGGLIAGAWAALMSLGQEGYLENTKAIMEVSESIQKGIKEIPELFIIGRPDMTIVAFGSDVVDIFEVNDIMSSKGWHLNPLQRPNSIHICVTLQHV--AVVDVFLRDLRESVETV-KQNPGPANGSLAPIYG 675
            E+ +L   +G+ +HVD CLGGF++PF    GY IP FDF   GVTSIS D HKYG  PKG+S+V+YR++E+   Q+ +V +W GG+Y +PT+AGSR G   A AWA L+S G++ Y+     I++ +  + + I++I  +   G+ D+++VAF  + V+I+EV+D M   GW+LN LQ P +IHIC+T+      VV+ F  DL +  E +  +    A+  +A +YG
Sbjct:  295 EIAKLGKKYGIPVHVDACLGGFMIPFMNDAGYLIPVFDFRNPGVTSISCDTHKYGCTPKGSSIVMYRSKELHHFQYFSVADWCGGIYATPTIAGSRAGANTAVAWATLLSFGRDEYVRRCAQIVKHTRMLAEKIEKIKWIKPYGKSDVSLVAFSGNGVNIYEVSDKMMKLGWNLNTLQNPAAIHICLTINQANEEVVNAFAVDLEKICEELAAKGEQKADSGMAAMYG 522          
The following BLAST results are available for this feature:
BLAST of CX289737 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
SGPL_ARATH4.802e-10982.67Sphingosine-1-phosphate lyase OS=Arabidopsis thali... [more]
SGPL_ORYSJ9.699e-10276.89Sphingosine-1-phosphate lyase OS=Oryza sativa subs... [more]
SGPL_DICDI8.576e-6652.42Sphingosine-1-phosphate lyase OS=Dictyostelium dis... [more]
SGPL1_RAT1.159e-6248.68Sphingosine-1-phosphate lyase 1 OS=Rattus norvegic... [more]
SGPL1_MOUSE5.752e-6248.68Sphingosine-1-phosphate lyase 1 OS=Mus musculus GN... [more]
SGPL1_HUMAN5.752e-6248.25Sphingosine-1-phosphate lyase 1 OS=Homo sapiens GN... [more]
SGPL1_PONAB1.281e-6148.25Sphingosine-1-phosphate lyase 1 OS=Pongo abelii GN... [more]
SGPL_DROME2.672e-5946.70Sphingosine-1-phosphate lyase OS=Drosophila melano... [more]
SGPL_YEAST6.375e-5343.86Sphingosine-1-phosphate lyase OS=Saccharomyces cer... [more]
SGPL_CAEEL2.507e-4942.11Sphingosine-1-phosphate lyase OS=Caenorhabditis el... [more]

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Properties
Property NameValue
Genbank descriptionC02016F02SK IF1 Citrus clementina cDNA clone C02016F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289737 ID=CX289737; Name=CX289737; organism=Citrus clementina; type=EST; length=676bp
GAGCTTGGTGAGCTGGCTTTAAGTCATGGAATGTGTCTCCATGTTGACCT
TTGTCTTGGTGGCTTTGTGTTACCTTTCGCTAAAAAACTGGGGTATCCGA
TTCCACCATTTGACTTTTCTGTCCAAGGGGTAACCTCAATATCAGTGGAT
GTGCATAAATATGGATTGGCTCCAAAAGGAACAAGCGTAGTCCTGTACAG
AAATCGCGAAATTAGAAAGCATCAATTTGTTGCTGTTACTGAGTGGTCAG
GTGGATTATATGTGTCTCCAACCGTAGCTGGAAGTAGGCCTGGGGGTTTG
ATTGCTGGGGCTTGGGCAGCACTGATGTCTCTGGGGCAAGAAGGATACTT
GGAAAACACCAAGGCTATCATGGAAGTGTCGGAGAGCATACAGAAGGGAA
TAAAGGAGATTCCTGAGTTATTCATCATTGGAAGACCAGACATGACAATT
GTGGCATTTGGATCTGATGTTGTCGATATATTTGAAGTCAACGATATCAT
GTCTTCCAAAGGCTGGCATTTGAATCCATTGCAAAGACCCAACAGCATTC
ACATCTGTGTTACCCTTCAACATGTAGCTGTTGTTGACGTTTTCCTTAGA
GATTTAAGGGAATCTGTTGAAACTGTAAAACAAAATCCCGGTCCTGCAAA
TGGTAGTCTAGCTCCCATATATGGTG
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