CX289808
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289808 vs. ExPASy Swiss-Prot
Match: YABD_BACSU (Uncharacterized deoxyribonuclease yabD OS=Bacillus subtilis GN=yabD PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.705e-17 Identity = 66/235 (28.09%), Postives = 97/235 (41.28%), Query Frame = 3 Query: 18 LFDAHCHLQDPRIFHKAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPSVIPCFGVHPWFVQERTPNWFSTLKEFFETTPAAAVGEIGLDKGSKGREIDFMDQVGVFRQQLELAKELKRPASIHCVRAFGDLLEIMKSVGPFPDGVIIHSYLGSAEMVPELSKLGAYFSFSGFLMSMKAQKAKKMLKVVTSVTVGCL*NILNSLAYLISSFY*VPSERILLETDAPDALP 722 LFD H HL + ++I V V G +M E + + G HP + T + +KE A+GE+GLD D +V FR Q+ LAKE+ P IH A D++ I+K G G I+H + GSAE+ E K+ Y SF G + A+K K+++K +P++R+L+ETD P P Sbjct: 2 LFDTHAHLNAEQYDTDLEEVIERAKAEKVERIVVVGFDRPTITRAMEMIEEYDFIYAAIGWHPVDAIDMTEEDLAWIKELSAHEKVVAIGEMGLDYHWDKSPKDIQKEV--FRNQIALAKEVNLPIIIHNRDATEDVVTILKEEGAEAVGGIMHCFTGSAEVARECMKMNFYLSFGGPVTFKNAKKPKEVVKE-------------------------IPNDRLLIETDCPFLTP 209
BLAST of CX289808 vs. ExPASy Swiss-Prot
Match: TAT3A_XENLA (Putative deoxyribonuclease tatdn3-A OS=Xenopus laevis GN=tatdn3-A PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.621e-13 Identity = 68/254 (26.77%), Postives = 112/254 (44.09%), Query Frame = 3 Query: 24 DAHCHLQDPRIFHKAPQLIATTVNSGVLHFAVNGVSEEDWNLVK--DMSERHPS-VIPCFGVHPWFVQERTPNWFSTLKEFFETTPA---------AAVGEIGLD------KGSKGREIDFMDQVGVFRQQLELAKELKRPASIHCVRAFGDLLEIMKSVGPFPDGVIIHSYLGSAEMVPELSKLGAYFSFSGFLMSMKAQKAKKMLKVVTSVTVGCL*NILNSLAYLISSFY*VPSERILLETDAPDALPKAE 731 D HCH+ ++I + +G+ A+ V+E K +S+R+P ++PCFG+HP +Q S + E A A+GEIGLD S+ RE +Q+ VF+ QLE+AK + P ++H A + +K G + V++H++ G E + G +FSF + ++ ++ KK++K+ +P E I LETD+P PK E Sbjct: 7 DCHCHMTAEEFSQDTEEVIEESKENGIQ--ALISVTEHGGEFEKLIYLSDRYPDYIMPCFGIHP--IQSNGDGQRSVTIKDLEPVLAQFDKYKDSLVAIGEIGLDFTPWLAPTSEQRE----EQMKVFQMQLEMAKRMDLPVNVHSRSAGRQTVSFLKEQG--AEKVLLHNFAGRPSAAQEGVQAGYFFSFPPAV--IRNEQRKKLIKM-------------------------IPLENICLETDSPSLGPKKE 223
BLAST of CX289808 vs. ExPASy Swiss-Prot
Match: Y343_BUCAP (Uncharacterized deoxyribonuclease BUsg_343 OS=Buchnera aphidicola subsp. Schizaphis graminum GN=BUsg_343 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.301e-12 Identity = 61/245 (24.90%), Postives = 100/245 (40.82%), Query Frame = 3 Query: 12 MKLFDAHCHLQDPRIFHKAPQLIATTVN--------SGVLHFAVNGVSEEDWNLVKDMSERHPSVIPCFGVHPWFVQERTPNWFSTLKEFFETTPAAAVGEIGLDKGSKGREIDFMDQVGVFRQQLELAKELKRPASIHCVRAFGDLLEIMKSVGPFPDGVIIHSYLGSAEMVPELSKLGAYFSFSGFLMSMKAQKAKKMLKVVTSVTVGCL*NILNSLAYLISSFY*VPSERILLETDAPDALP 722 M L D+HCH+ I K L+ + + V F S +++ K + + S+ G+HP + Q+ + LK+ A+GE GLD + ++ FR+ + +A L +P IH A D ++I+K G I+HS+ S + EL +G Y SFSG + K+ + LK +P E++L+ETD+P P Sbjct: 1 MFLIDSHCHIDQMNIDQKNDDLLHQEIEKILNKAYENHVKKFLTVSTSIQNFYKTKKLLSTYDSIFYSCGIHPLYCQKEI-ECLNELKKLSYDKCVIALGETGLDYYYSFETKNLQEKF--FREHIRIAITLNKPIIIHSRNAIKDTIKILKEENAEKCGGILHSFTESEKSAFELLDMGFYISFSGIITFKKSIELCNTLKK-------------------------IPLEKLLIETDSPYLAP 217
BLAST of CX289808 vs. ExPASy Swiss-Prot
Match: TATD3_BOVIN (Putative deoxyribonuclease TATDN3 OS=Bos taurus GN=TATDN3 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.898e-12 Identity = 57/208 (27.40%), Postives = 93/208 (44.71%), Query Frame = 3 Query: 18 LFDAHCHLQDPRIFHKAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPS-VIPCFGVHPWFVQERTP--NWFSTLKEFFETTP--------AAAVGEIGLDKGSK--GREIDFMDQVGVFRQQLELAKELKRPASIHCVRAFGDLLEIMKSVGPFPDGVIIHSYLGSAEMVPELSKLGAYFSFSGFLMSMKAQKAKKMLKVVT 602 L D HCHL P H ++ + V+ V ++ + +S+R+ V+PC GVHP VQ +P TLK+ P A+GE+GLD + G + +Q V +Q++LAK L P ++H A + ++ G D V++H++ G + E K G +FS ++ QK K L + + Sbjct: 8 LVDCHCHLSAPDFDHDLDDVLKKAKEANVMALVVVAEHSGEFEKIMQLSQRYNGFVLPCLGVHP--VQGVSPEDQRSVTLKDLDVALPIIENYKDQLLAIGEVGLDFSPRFAGTDEQKEEQRQVLIRQVQLAKRLNLPLNVHSRSAGRPTISLLNEQG--ADKVLLHAFDGRPSVAMEGVKAGYFFSIPPSIIRSGQQKLVKQLPLTS 211
BLAST of CX289808 vs. ExPASy Swiss-Prot
Match: Y1786_SYNY3 (Uncharacterized deoxyribonuclease sll1786 OS=Synechocystis sp. (strain PCC 6803) GN=sll1786 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.785e-12 Identity = 60/241 (24.90%), Postives = 103/241 (42.74%), Query Frame = 3 Query: 12 MKLFDAHCHLQDPRIFHKAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPSVIPCFGVHPWFVQERTPNWFSTLKEFFETTP-AAAVGEIGLDKGSKGREIDFMD-QVGVFRQQLELAKELKRPASIHCVRAFGDLLEIMK--SVGPFPDGVIIHSYLGSAEMVPELSKLGAYFSFSGFLMSMKAQKAKKMLKVVTSVTVGCL*NILNSLAYLISSFY*VPSERILLETDAPDALP 722 M L D H H+ QL +GV+ + V ++++ ++ +++R P + G+HP ++ N + + + A+GE+GLD + D D Q+ VFR QL +A+EL +P IHC A + +++ P ++H + G+ E LG Y SFSG + KA+ + ++ VP +R+L+ETD P P Sbjct: 1 MHLVDTHVHINFDVFAADLDQLQHRWRQAGVVQLVHSCVKPQEFDQIQSLADRFPELFFAVGLHPLDAEDWQDNTAGQILAYAKADDRVVAIGEMGLDFF----KADNRDHQIEVFRAQLAIARELNKPVIIHCRDAAQTMRQVLTDFQAESGPVAGVMHCWGGTPEETQWFLDLGFYISFSGTVTFKKAEGIQASAQM-------------------------VPPDRLLVETDCPFLAP 212
BLAST of CX289808 vs. ExPASy Swiss-Prot
Match: Y081_HAEIN (Uncharacterized deoxyribonuclease HI0081 OS=Haemophilus influenzae GN=HI0081 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.785e-12 Identity = 61/242 (25.21%), Postives = 99/242 (40.91%), Query Frame = 3 Query: 12 MKLFDAHCHLQDPRIFHKAP--QLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPSVIPCFGV--HPWFVQERTPNWFSTLKEFFET--TPAAAVGEIGLDKGSKGREID--FMDQVGVFRQQLELAKELKRPASIHCVRAFGDLLEIMKSVGPFPDGVIIHSYLGSAEMVPELSKLGAYFSFSGFLMSMKAQKAKKMLKVVTSVTVGCL*NILNSLAYLISSFY*VPSERILLETDAPD 713 M FD H HL + F P QLI + V V V E D+ +++M+ P + C+G+ HP ++QE N L++ + T AV EIGL++ D + Q F QL LAK+ P +IH + + +K + P ++H + GS + LG G + +A K ++ + +P + ++LETD+PD Sbjct: 1 MHFFDTHTHLNYLQQFTGEPLSQLIDNAKQADVQKILVVAVKEADFKTIQNMTALFPDNL-CYGLGLHPLYIQEHAENDLILLEQALKNRDTNCTAVAEIGLERAIPDLLTDELWAKQCHFFESQLYLAKQFNLPVNIHSRKTHDQIFTFLKRI-PLSKLGVVHGFSGSYDQAKRFVDLGYKIGVGGTITYERANKTRQAIAK-------------------------LPLDALVLETDSPD 215
BLAST of CX289808 vs. ExPASy Swiss-Prot
Match: TATD2_HUMAN (Putative deoxyribonuclease TATDN2 OS=Homo sapiens GN=TATDN2 PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 4.943e-12 Identity = 60/186 (32.26%), Postives = 82/186 (44.09%), Query Frame = 3 Query: 192 FGVHPWFVQERTPNWFSTLKEFFETTPAAAVGEIGLDKGSKGREIDFMDQVGVFRQQLELAKELKRPASIHCVRAFGDLLEIMKSVGPFPDGVIIHSYLGSAEMVPELSKLGAYFS--FSGFLMSMKAQKAKKMLKVVTSVTVGCL*NILNSLAYLISSFY*VPSERILLETDAPDALPKAELNSL 743 FG HP F + + + L + A A GE+GLD K +Q VF +QL+LA LK+P IHC A DLLEIMK P + H + GS ++ L K S F+ L A +A++ L+ +P ERI++ETDAP LP+ SL Sbjct: 561 FGCHPHFARYYSESQERNLLQALRHPKAVAFGEMGLDYSYKCTT-PVPEQHKVFERQLQLAVSLKKPLVIHCREADEDLLEIMKKFVPPDYKIHRHCFTGSYPVIEPLLKYFPNMSVGFTAVLTYSSAWEAREALRQ-------------------------IPLERIIVETDAPYFLPRQVPKSL 720
BLAST of CX289808 vs. ExPASy Swiss-Prot
Match: YJJV_ECOLI (Uncharacterized deoxyribonuclease yjjV OS=Escherichia coli (strain K12) GN=yjjV PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 4.185e-11 Identity = 57/235 (24.26%), Postives = 91/235 (38.72%), Query Frame = 3 Query: 15 KLFDAHCHLQDPRIFHKAPQLIATTVNSGVLHFAVNGVSEEDWNLVKDMSERHPSVIPCFGVHPWFVQERTPNWFSTLKEFFETTPA--AAVGEIGLDKGSKGREIDFMDQVGVFRQQLELAKELKRPASIHCVRAFGDLLEIMKSVGPFPDGVIIHSYLGSAEMVPELSKLGAYFSFSGFLMSMKAQKAKKMLKVVTSVTVGCL*NILNSLAYLISSFY*VPSERILLETDAPD 713 + D HCH P + +GV V E++ V ++E + + G+HP +++ + L++ E PA AVGEIGLD G + F Q + +QL+LAK P +H R L +K P ++H + GS + +LG G + +A K + ++ +P +LLETDAPD Sbjct: 4 RFIDTHCHFDFPPFSGDEEASLQRAAQAGVGKIIVPATEAENFARVLALAENYQPLYAALGLHPGMLEKHSDVSLEQLQQALERRPAKVVAVGEIGLD--LFGDDPQFERQQWLLDEQLKLAKRYDLPVILHSRRTHDKLAMHLKR-HDLPRTGVVHGFSGSLQQAERFVQLGYKIGVGGTITYPRASKTRDVIAK-------------------------LPLASLLLETDAPD 210 The following BLAST results are available for this feature:
BLAST of CX289808 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX289808 ID=CX289808; Name=CX289808; organism=Citrus clementina; type=EST; length=744bpback to top |