CX289854

Overview
NameCX289854
Unique NameCX289854
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length559
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX289854 vs. ExPASy Swiss-Prot
Match: AAPC_CENCI (Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.769e-23
Identity = 51/60 (85.00%), Postives = 54/60 (90.00%), Query Frame = 2 
Query:   17 KAKAMADFGDDEYKHMLCVEEAAVEKPITLKPGEEWKGRLELSGVPSSYCSGQLDPQKVL 196
            KAKAM DFGD EYK+MLCVE AAVEKPITLKPGEEW+GR+ LS VPSSYCSGQLDP KVL
Sbjct:  268 KAKAMQDFGDAEYKNMLCVEPAAVEKPITLKPGEEWRGRIALSAVPSSYCSGQLDPLKVL 327
The following BLAST results are available for this feature:
BLAST of CX289854 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
AAPC_CENCI2.769e-2385.00Putative glucose-6-phosphate 1-epimerase OS=Cenchr... [more]
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Properties
Property NameValue
Genbank descriptionC02017H01SK IF1 Citrus clementina cDNA clone C02017H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289854 ID=CX289854; Name=CX289854; organism=Citrus clementina; type=EST; length=559bp
GAATTCGGCACGAGGGAAAGCAAAAGCTATGGCTGATTTTGGGGATGATG
AGTATAAGCATATGTTGTGCGTGGAGGAAGCTGCTGTTGAAAAACCGATT
ACATTGAAACCTGGGGAGGAGTGGAAAGGAAGGCTGGAACTTTCTGGTGT
TCCGTCTAGTTATTGTAGTGGGCAACTTGATCCACAGAAAGTTCTCTCGA
GCAGCTGAAGGATCCATCAGTCTGGTCTATATTCTGTACAGGTAATCCGT
ATTTGTTTGCAGCAGCCTGTGGATTTGTATTGATGTCTGGCCAATATATT
TTGTTTTTTCTCCATGTGAATTTCCATTATCCTGGTCAAAGAGATGGATT
CGTGACTAAATAGGAGTTGTGAAATAATGTAGCTCTTAAAGACAAGACTG
TTTGAACGATGGATGAGTATCACTCGAGTTGTGTCAAAGTAGAACGAATA
ATAAACATATAATATGATTAGAATGGTGAAAATTATTGATACCACGAATG
AGATCATATTACATTGTAAAATAGAATTCCTTTCTTGAGTTAAAAAAAAA
AAAAAAAAA
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