CX289858
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289858 vs. ExPASy Swiss-Prot
Match: PDR2_NICPL (Pleiotropic drug resistance protein 2 OS=Nicotiana plumbaginifolia GN=PDR2 PE=2 SV=1) HSP 1 Score: 283.108 bits (723), Expect = 1.073e-75 Identity = 131/207 (63.29%), Postives = 159/207 (76.81%), Query Frame = 3 Query: 15 GLLFGLIFWDKGQKTKKQQDLQNLFGALYCAVFFLGSTNANSVMSVVSTERTVFYRERAAGMYSTLAYAFSQVLIELIYVAFQTVVYVLILYSMMGFAWKAKRFFWFLYMVMMSFMQFTLYGMMIVALTPAPQIGAILSGFFLSLWNLFSGFLIPRVQIPIWWRWYYWLSPVAWTLYGLVTSQVGDIEGNVEIPGSTATMTVKQLLK 635 G+LFG+IFW+KG + +QQDL NL GA Y AV FLG+TNA++V SVV+ ERTVFYRERAAGMYS L YAF+QV IE IYVA QT VY L+L+SM+G+ W A +FF+F Y + M F F++YGMM+VALTP QI AI+ FFLS WNLFSGFLIPR IP+WWRWYYW SPVAWT+YG+ SQVGD +E+ G T + V + LK Sbjct: 1215 GILFGVIFWNKGNQIHRQQDLLNLLGATYAAVMFLGATNASAVQSVVAIERTVFYRERAAGMYSELPYAFAQVAIETIYVAIQTFVYSLLLFSMIGYQWTAVKFFYFYYFIFMCFTYFSMYGMMVVALTPGYQIAAIVMSFFLSFWNLFSGFLIPRPLIPVWWRWYYWASPVAWTIYGIFASQVGDRTDELELTGETEKIQVNEFLK 1421
BLAST of CX289858 vs. ExPASy Swiss-Prot
Match: AB34G_ARATH (ABC transporter G family member 34 OS=Arabidopsis thaliana GN=ABCG34 PE=2 SV=1) HSP 1 Score: 278.485 bits (711), Expect = 2.642e-74 Identity = 131/207 (63.29%), Postives = 156/207 (75.36%), Query Frame = 3 Query: 15 GLLFGLIFWDKGQKTKKQQDLQNLFGALYCAVFFLGSTNANSVMSVVSTERTVFYRERAAGMYSTLAYAFSQVLIELIYVAFQTVVYVLILYSMMGFAWKAKRFFWFLYMVMMSFMQFTLYGMMIVALTPAPQIGAILSGFFLSLWNLFSGFLIPRVQIPIWWRWYYWLSPVAWTLYGLVTSQVGDIEGNVEIPGSTATMTVKQLLK 635 G+LFGL+FW G K +K+QDL N FGA+Y AV FLG+TNA +V V+ ERTVFYRE+AAGMYS + YA SQV +E++Y QT VY LILYSM+G+ W +FFWF Y ++ F+ FTLYGMM+VALTP QI I FFLS WNLFSGFLIPR QIPIWWRWYYW SPVAWTLYG++TSQVGD + V I G M++K LLK Sbjct: 1208 GVLFGLLFWQTGTKIEKEQDLNNFFGAMYAAVLFLGATNAATVQPAVAIERTVFYREKAAGMYSAIPYAISQVAVEIMYNTIQTGVYTLILYSMIGYDWTVVKFFWFYYYMLTCFVYFTLYGMMLVALTPNYQIAGICLSFFLSFWNLFSGFLIPRPQIPIWWRWYYWASPVAWTLYGIITSQVGDRDSIVHITG-VGDMSLKTLLK 1413
BLAST of CX289858 vs. ExPASy Swiss-Prot
Match: AB39G_ARATH (ABC transporter G family member 39 OS=Arabidopsis thaliana GN=ABCG39 PE=2 SV=1) HSP 1 Score: 271.937 bits (694), Expect = 2.473e-72 Identity = 129/207 (62.32%), Postives = 154/207 (74.40%), Query Frame = 3 Query: 15 GLLFGLIFWDKGQKTKKQQDLQNLFGALYCAVFFLGSTNANSVMSVVSTERTVFYRERAAGMYSTLAYAFSQVLIELIYVAFQTVVYVLILYSMMGFAWKAKRFFWFLYMVMMSFMQFTLYGMMIVALTPAPQIGAILSGFFLSLWNLFSGFLIPRVQIPIWWRWYYWLSPVAWTLYGLVTSQVGDIEGNVEIPGSTATMTVKQLLK 635 G+LFGLIFW G KT+ +QDL N FGA+Y AV FLG+ NA +V ++ ERTVFYRE+AAGMYS + YA SQV +E++Y QT VY LILYSM+G W +F WF Y ++ SF+ FTLYGMM++ALTP QI I FFLSLWNLFSGFLIPR QIPIWWRWYYW +PVAWTLYGL+TSQVGD + V I G + +K LLK Sbjct: 1209 GVLFGLIFWQIGTKTENEQDLNNFFGAMYAAVLFLGALNAATVQPAIAIERTVFYREKAAGMYSAIPYAISQVAVEIMYNTIQTGVYTLILYSMIGCNWTMAKFLWFYYYMLTSFIYFTLYGMMLMALTPNYQIAGICMSFFLSLWNLFSGFLIPRPQIPIWWRWYYWATPVAWTLYGLITSQVGDKDSMVHISG-IGDIDLKTLLK 1414
BLAST of CX289858 vs. ExPASy Swiss-Prot
Match: AB40G_ARATH (ABC transporter G family member 40 OS=Arabidopsis thaliana GN=ABCG40 PE=1 SV=1) HSP 1 Score: 256.144 bits (653), Expect = 1.404e-67 Identity = 118/206 (57.28%), Postives = 150/206 (72.82%), Query Frame = 3 Query: 18 LLFGLIFWDKGQKTKKQQDLQNLFGALYCAVFFLGSTNANSVMSVVSTERTVFYRERAAGMYSTLAYAFSQVLIELIYVAFQTVVYVLILYSMMGFAWKAKRFFWFLYMVMMSFMQFTLYGMMIVALTPAPQIGAILSGFFLSLWNLFSGFLIPRVQIPIWWRWYYWLSPVAWTLYGLVTSQVGDIEGNVEIPGSTATMTVKQLLK 635 L+FG +FWD G KTK +QDL N G++Y AV FLG NA SV VV+ ERTVFYRE+AAGMYS + YAF+QV IE+ YV Q +VY LI+Y+M+GF W A +FFW+L+ + SF+ FT YGMM VA+TP I +++S F +WNLFSGFLIPR +P+WW WYYWL PVAWTLYGL+ SQ GDI P + + M+VKQ ++ Sbjct: 1182 LMFGTMFWDLGGKTKTRQDLSNAMGSMYTAVLFLGLQNAASVQPVVNVERTVFYREQAAGMYSAMPYAFAQVFIEIPYVLVQAIVYGLIVYAMIGFEWTAVKFFWYLFFMYGSFLTFTFYGMMAVAMTPNHHIASVVSSAFYGIWNLFSGFLIPRPSMPVWWEWYYWLCPVAWTLYGLIASQFGDITE----PMADSNMSVKQFIR 1383
BLAST of CX289858 vs. ExPASy Swiss-Prot
Match: PDR1_NICPL (Pleiotropic drug resistance protein 1 OS=Nicotiana plumbaginifolia GN=PDR1 PE=1 SV=1) HSP 1 Score: 251.136 bits (640), Expect = 4.518e-66 Identity = 113/206 (54.85%), Postives = 149/206 (72.33%), Query Frame = 3 Query: 18 LLFGLIFWDKGQKTKKQQDLQNLFGALYCAVFFLGSTNANSVMSVVSTERTVFYRERAAGMYSTLAYAFSQVLIELIYVAFQTVVYVLILYSMMGFAWKAKRFFWFLYMVMMSFMQFTLYGMMIVALTPAPQIGAILSGFFLSLWNLFSGFLIPRVQIPIWWRWYYWLSPVAWTLYGLVTSQVGDIEGNVEIPGSTATMTVKQLLK 635 L+FG +FWD G K + QDL N G++Y AV FLG N++SV VVS ERTVFYRE+AAGMYS + YAF+QVLIE+ Y+ Q VY LI+YSM+GF W +FFW + + +F+ FT +GMM VA+TP + +I++GFF ++WNLFSGF++PR +IPIWWRWYYW P+AWTLYGLV SQ GD++ P + TV+Q L+ Sbjct: 1195 LIFGTMFWDIGTKVSRNQDLVNAMGSMYAAVLFLGVQNSSSVQPVVSVERTVFYREKAAGMYSAIPYAFAQVLIEIPYIFVQATVYGLIVYSMIGFEWTVAKFFWDFFFMFFTFLYFTFFGMMTVAVTPNQNVASIVAGFFYTVWNLFSGFIVPRPRIPIWWRWYYWGCPIAWTLYGLVASQFGDLQD----PLTDQNQTVEQFLR 1396
BLAST of CX289858 vs. ExPASy Swiss-Prot
Match: PDR2_ORYSJ (Probable pleiotropic drug resistance protein 2 OS=Oryza sativa subsp. japonica GN=PDR2 PE=3 SV=1) HSP 1 Score: 249.595 bits (636), Expect = 1.314e-65 Identity = 112/186 (60.22%), Postives = 137/186 (73.66%), Query Frame = 3 Query: 18 LLFGLIFWDKGQKTKKQQDLQNLFGALYCAVFFLGSTNANSVMSVVSTERTVFYRERAAGMYSTLAYAFSQVLIELIYVAFQTVVYVLILYSMMGFAWKAKRFFWFLYMVMMSFMQFTLYGMMIVALTPAPQIGAILSGFFLSLWNLFSGFLIPRVQIPIWWRWYYWLSPVAWTLYGLVTSQVGDI 575 LLFG IFWD G KT K QDL N G++Y AV F+G N+ SV VVS ERTVFYRERAAGMYS YAF QV IE Y Q+++Y +I+YSM+GF W A +FFW+L+ + +F+ FT YGMM V LTP+ + +I+S F +WNLFSGF+IPR ++PIWWRWY W+ PVAWTLYGLV SQ GDI Sbjct: 1224 LLFGTIFWDLGGKTGKSQDLFNAMGSMYSAVLFIGVLNSQSVQPVVSVERTVFYRERAAGMYSAFPYAFGQVAIEFPYTLVQSIIYGIIVYSMIGFKWTAAKFFWYLFFMFFTFLYFTFYGMMAVGLTPSYHVASIVSSAFYGIWNLFSGFIIPRPKVPIWWRWYCWICPVAWTLYGLVASQFGDI 1409
BLAST of CX289858 vs. ExPASy Swiss-Prot
Match: PDR1_TOBAC (Pleiotropic drug resistance protein 1 OS=Nicotiana tabacum GN=PDR1 PE=2 SV=1) HSP 1 Score: 247.669 bits (631), Expect = 4.995e-65 Identity = 112/206 (54.37%), Postives = 149/206 (72.33%), Query Frame = 3 Query: 18 LLFGLIFWDKGQKTKKQQDLQNLFGALYCAVFFLGSTNANSVMSVVSTERTVFYRERAAGMYSTLAYAFSQVLIELIYVAFQTVVYVLILYSMMGFAWKAKRFFWFLYMVMMSFMQFTLYGMMIVALTPAPQIGAILSGFFLSLWNLFSGFLIPRVQIPIWWRWYYWLSPVAWTLYGLVTSQVGDIEGNVEIPGSTATMTVKQLLK 635 L+FG +FWD G K K QDL N G++Y AV FLG NA+SV VV+ ERTVFYRERAAGMYS + YAF QV IE+ Y+ Q+V Y +I+Y+M+GF W +FFW+L+++ + + FT YGMM VA+TP + +I++ FF +WNLFSGF+IPR ++P+WWRWYYW +PVAWTLYGLV SQ GDI+ + + TV+Q L+ Sbjct: 1194 LIFGTMFWDLGTKVSKSQDLLNAMGSMYAAVLFLGVQNASSVQPVVAIERTVFYRERAAGMYSAIPYAFGQVSIEIPYIFVQSVFYGIIVYAMIGFEWDVGKFFWYLFIMFFTLLYFTFYGMMGVAVTPNQNVASIVAAFFYGVWNLFSGFIIPRPRMPVWWRWYYWANPVAWTLYGLVASQFGDIQTKL-----SDNETVEQFLR 1394 HSP 2 Score: 68.9366 bits (167), Expect = 3.180e-11 Identity = 41/176 (23.30%), Postives = 87/176 (49.43%), Query Frame = 3 Query: 90 GALYCAVFFLGSTNANSVMSVVSTERTVFYRERAAGMYSTLAYAFSQVLIELIYVAFQTVVYVLILYSMMGFAWKAKRFF-WFLYMVMMSFMQFTLYGMMIVALTPAPQIGAILSGFFLSLWNLFSGFLIPRVQIPIWWRWYYWLSPVAWTLYGLVTSQVGDIEGNVEIPGSTATM 614 GAL+ V + N S +++ + VFY++R + + AYA ++++ + ++V++ Y ++GF RF FL +++++ M ++ I A+ + + F L L GF++ R + WW W YW+SP+ +++ ++ ++ + N +PG T+ Sbjct: 568 GALFFVVIMI-MFNGMSELAMTIFKLPVFYKQRDLLFFPSWAYAIPSWILKIPVTLVEVGLWVILTYYVIGFDPNITRFLKQFLLLIVVNQMASGMF-RFIGAVGRTMGVASTFGSFALLLQFALGGFVLSRDDVKSWWIWGYWISPMMYSVNSILVNEFDGKKWNHIVPGGNETL 741
BLAST of CX289858 vs. ExPASy Swiss-Prot
Match: PDR5_ORYSJ (Pleiotropic drug resistance protein 5 OS=Oryza sativa subsp. japonica GN=PDR5 PE=2 SV=2) HSP 1 Score: 246.128 bits (627), Expect = 1.453e-64 Identity = 107/207 (51.69%), Postives = 150/207 (72.46%), Query Frame = 3 Query: 15 GLLFGLIFWDKGQKTKKQQDLQNLFGALYCAVFFLGSTNANSVMSVVSTERTVFYRERAAGMYSTLAYAFSQVLIELIYVAFQTVVYVLILYSMMGFAWKAKRFFWFLYMVMMSFMQFTLYGMMIVALTPAPQIGAILSGFFLSLWNLFSGFLIPRVQIPIWWRWYYWLSPVAWTLYGLVTSQVGDIEGNVEIPGSTATMTVKQLLK 635 GL+FG +FW +G+ + DL NL GA Y AVFFLG+ N +++ VVS ERTVFYRE+AAGMYS L+YAF+Q +E Y A Q V+Y +++YSM+G+ WKA +FF+FL+ ++ +F FTL+ MM+VA T + + A+L F LS WN F+GF+IPR IP+WWRW+YW +PV+WT+YG++ SQ D + V +PG + TM VK L+ Sbjct: 1208 GLVFGTVFWRRGKNIESVNDLNNLLGATYAAVFFLGAANLLTLLPVVSVERTVFYREKAAGMYSPLSYAFAQGFVEFCYSAVQGVLYTILIYSMIGYEWKADKFFYFLFFMIAAFAYFTLFSMMLVACTASEMLAAVLVSFVLSSWNNFAGFIIPRPLIPVWWRWFYWANPVSWTIYGVIASQFADSDRVVTVPGQSTTMVVKDFLE 1414
BLAST of CX289858 vs. ExPASy Swiss-Prot
Match: PDR4_ORYSJ (Pleiotropic drug resistance protein 4 OS=Oryza sativa subsp. japonica GN=PDR4 PE=2 SV=1) HSP 1 Score: 245.743 bits (626), Expect = 1.898e-64 Identity = 112/199 (56.28%), Postives = 144/199 (72.36%), Query Frame = 3 Query: 18 LLFGLIFWDKGQKTKKQQDLQNLFGALYCAVFFLGSTNANSVMSVVSTERTVFYRERAAGMYSTLAYAFSQVLIELIYVAFQTVVYVLILYSMMGFAWKAKRFFWFLYMVMMSFMQFTLYGMMIVALTPAPQIGAILSGFFLSLWNLFSGFLIPRVQIPIWWRWYYWLSPVAWTLYGLVTSQVGDIEGNVEIPGSTATM 614 L+FG +FW+ G +TKKQQDL N G++Y AV ++G N+ SV VV ERTVFYRERAAGMYS YAF QV IEL Y+ QT++Y +++YSM+GF W +F W+L+ + + + FT YGMM V LTP I AI+S F ++WNLFSG+LIPR +IP+WWRWY W+ PVAWTLYGLV SQ GDI+ +E G T T+ Sbjct: 1209 LMFGTMFWNLGTRTKKQQDLFNAMGSMYAAVLYIGVQNSGSVQPVVVVERTVFYRERAAGMYSAFPYAFGQVAIELPYIMVQTLIYGVLVYSMIGFEWTVAKFLWYLFFMYFTLLYFTFYGMMAVGLTPNESIAAIISSAFYNVWNLFSGYLIPRPKIPVWWRWYCWICPVAWTLYGLVASQFGDIQHVLE--GDTRTV 1405
BLAST of CX289858 vs. ExPASy Swiss-Prot
Match: PDR3_ORYSJ (Pleiotropic drug resistance protein 3 OS=Oryza sativa subsp. japonica GN=PDR3 PE=2 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 3.238e-64 Identity = 112/191 (58.64%), Postives = 137/191 (71.73%), Query Frame = 3 Query: 18 LLFGLIFWDKGQKTKKQQDLQNLFGALYCAVFFLGSTNANSVMSVVSTERTVFYRERAAGMYSTLAYAFSQVLIELIYVAFQTVVYVLILYSMMGFAWKAKRFFWFLYMVMMSFMQFTLYGMMIVALTPAPQIGAILSGFFLSLWNLFSGFLIPRVQIPIWWRWYYWLSPVAWTLYGLVTSQVGDIEGNVE 590 LLFG IFWD G K K QDL N G++Y AV F+G N SV VV+ ERTVFYRERAAGMYS YAF QV+IE+ Y Q VY +I+Y+M+GF W A +FFW+L+ ++ + + FT YGMM V LTP I +I+S F ++WNLFSGF+IPR ++PIWWRWY W PVAWTLYGLV SQ GDIE +E Sbjct: 1217 LLFGTIFWDLGGKVTKSQDLFNAMGSMYAAVLFIGVMNCTSVQPVVAVERTVFYRERAAGMYSAFPYAFGQVVIEIPYTLVQATVYGIIVYAMIGFEWTAAKFFWYLFFMVFTLLYFTFYGMMAVGLTPNYHIASIVSSAFYAIWNLFSGFVIPRPRVPIWWRWYCWACPVAWTLYGLVVSQFGDIETPME 1407 The following BLAST results are available for this feature:
BLAST of CX289858 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX289858 ID=CX289858; Name=CX289858; organism=Citrus clementina; type=EST; length=742bpback to top |