CX289859
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289859 vs. ExPASy Swiss-Prot
Match: TBC17_HUMAN (TBC1 domain family member 17 OS=Homo sapiens GN=TBC1D17 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.674e-18 Identity = 56/126 (44.44%), Postives = 73/126 (57.94%), Query Frame = 3 Query: 15 DVIRTDRTLVFYEKQEN--LSKLWDILAVYAWVDRDVGYCQGMSDLCSPMIILLENEADAFWCFERLMRRLRGNFRCTESSVGVETQLSNLASITQVIDPKLHQHLGMI*NIRFCL*F-WVIIYSK 383 DV RTDRT FYE EN L L DIL Y D+GY QGMSDL SP++ +++NE DAFWCF M ++GNF ES ++ QL L + +V+DP L L + C F W++I+ K Sbjct: 378 DVSRTDRTNKFYEGPENPGLGLLNDILLTYCMYHFDLGYVQGMSDLLSPILYVIQNEVDAFWCFCGFMELVQGNFE--ESQETMKRQLGRLLLLLRVLDPLLCDFLDSQDSGSLCFCFRWLLIWFK 501
BLAST of CX289859 vs. ExPASy Swiss-Prot
Match: TBC15_MOUSE (TBC1 domain family member 15 OS=Mus musculus GN=Tbc1d15 PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.674e-18 Identity = 49/99 (49.49%), Postives = 65/99 (65.66%), Query Frame = 3 Query: 15 DVIRTDRTLVFYEKQEN--LSKLWDILAVYAWVDRDVGYCQGMSDLCSPMIILLENEADAFWCFERLMRRLRGNFRCTESSVGVETQLSNLASITQVID 305 DV RTDRT FYE Q+N L L DIL Y D D+GY QGMSDL SP++ ++ENE DAFWCF M ++ NF E G++TQL L+++ +++D Sbjct: 397 DVNRTDRTNKFYEGQDNPGLILLHDILMTYCMYDFDLGYVQGMSDLLSPLLYVMENEVDAFWCFASYMDQMHQNFE--EQMQGMKTQLIQLSTLLRLLD 493
BLAST of CX289859 vs. ExPASy Swiss-Prot
Match: TBC15_HUMAN (TBC1 domain family member 15 OS=Homo sapiens GN=TBC1D15 PE=1 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 1.674e-18 Identity = 49/99 (49.49%), Postives = 65/99 (65.66%), Query Frame = 3 Query: 15 DVIRTDRTLVFYEKQEN--LSKLWDILAVYAWVDRDVGYCQGMSDLCSPMIILLENEADAFWCFERLMRRLRGNFRCTESSVGVETQLSNLASITQVID 305 DV RTDRT FYE Q+N L L DIL Y D D+GY QGMSDL SP++ ++ENE DAFWCF M ++ NF E G++TQL L+++ +++D Sbjct: 414 DVNRTDRTNKFYEGQDNPGLILLHDILMTYCMYDFDLGYVQGMSDLLSPLLYVMENEVDAFWCFASYMDQMHQNFE--EQMQGMKTQLIQLSTLLRLLD 510
BLAST of CX289859 vs. ExPASy Swiss-Prot
Match: TBC17_MOUSE (TBC1 domain family member 17 OS=Mus musculus GN=Tbc1d17 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.855e-18 Identity = 56/126 (44.44%), Postives = 72/126 (57.14%), Query Frame = 3 Query: 15 DVIRTDRTLVFYEKQEN--LSKLWDILAVYAWVDRDVGYCQGMSDLCSPMIILLENEADAFWCFERLMRRLRGNFRCTESSVGVETQLSNLASITQVIDPKLHQHLGMI*NIRFCL*F-WVIIYSK 383 DV RTDRT FYE EN LS L DIL Y D+GY QGMSDL SP++ +++NE DAFWCF M + GNF ES ++ QL L + +V+D L L + C F W++I+ K Sbjct: 378 DVSRTDRTNKFYEGPENPGLSLLHDILLTYCMYHFDLGYVQGMSDLLSPILFVVQNEVDAFWCFCGFMELVHGNFE--ESQETMKRQLGQLLLLLRVLDQPLCDFLDSQDSGSLCFCFRWLLIWFK 501
BLAST of CX289859 vs. ExPASy Swiss-Prot
Match: SGSM2_MOUSE (Small G protein signaling modulator 2 OS=Mus musculus GN=Sgsm2 PE=2 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 7.278e-14 Identity = 44/133 (33.08%), Postives = 77/133 (57.89%), Query Frame = 3 Query: 3 QIGLDVIRTDRTLVFYEKQENLSKLWDILAVYAWVDRDVGYCQGMSDLCSPMIILLENEADAFWCFERLMRRLRGNFRCTESSVGVETQLSNLASITQVIDPKL----HQHLGMI*NIRFCL*FWVIIYSKNV 389 +I DV R DR +Y NL +L DI+ Y W D+GY QGM DL +P++++L+N+ A+ CF LM+R+ NF S +++ +N+ S+ Q++D +L HQ+ G + FC ++++ + + + Sbjct: 795 RIDKDVQRCDRNY-WYFTTSNLERLRDIMCSYVWEHLDMGYVQGMCDLLAPLLVILDNDQLAYSCFSHLMKRMGQNF---PSGGAMDSHFANMRSLIQILDSELFELMHQN-GDYTHFYFCYRWFLLDFKREL 922
BLAST of CX289859 vs. ExPASy Swiss-Prot
Match: SGSM2_HUMAN (Small G protein signaling modulator 2 OS=Homo sapiens GN=SGSM2 PE=1 SV=4) HSP 1 Score: 77.411 bits (189), Expect = 7.278e-14 Identity = 44/133 (33.08%), Postives = 76/133 (57.14%), Query Frame = 3 Query: 3 QIGLDVIRTDRTLVFYEKQENLSKLWDILAVYAWVDRDVGYCQGMSDLCSPMIILLENEADAFWCFERLMRRLRGNFRCTESSVGVETQLSNLASITQVIDPKL----HQHLGMI*NIRFCL*FWVIIYSKNV 389 +I DV R DR +Y NL +L D++ Y W DVGY QGM DL +P+++ L+N+ A+ CF LM+R+ NF + ++T +N+ S+ Q++D +L HQ+ G + FC ++++ + + + Sbjct: 796 RIDKDVQRCDRNY-WYFTPPNLERLRDVMCSYVWEHLDVGYVQGMCDLLAPLLVTLDNDQLAYSCFSHLMKRMSQNF---PNGGAMDTHFANMRSLIQILDSELFELMHQN-GDYTHFYFCYRWFLLDFKREL 923
BLAST of CX289859 vs. ExPASy Swiss-Prot
Match: SGSM1_MOUSE (Small G protein signaling modulator 1 OS=Mus musculus GN=Sgsm1 PE=2 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 9.505e-14 Identity = 45/133 (33.83%), Postives = 78/133 (58.65%), Query Frame = 3 Query: 3 QIGLDVIRTDRTLVFYEKQENLSKLWDILAVYAWVDRDVGYCQGMSDLCSPMIILLENEADAFWCFERLMRRLRGNFRCTESSVGVETQLSNLASITQVIDPKL----HQHLGMI*NIRFCL*FWVIIYSKNV 389 +I DV R DR+ +Y NL KL +I+ Y W ++GY QGM DL +P++++L++EA AF CF LM+R+ NF ++T +N+ S+ Q++D +L HQ+ G + FC ++++ + + + Sbjct: 883 RIEKDVQRCDRSY-WYFTAANLEKLRNIMCSYIWQHIEIGYVQGMCDLLAPLLVILDDEALAFSCFTELMKRMNQNF---PHGGAMDTHFANMRSLIQILDSELFELMHQN-GDYTHFYFCYRWFLLDFKREL 1010
BLAST of CX289859 vs. ExPASy Swiss-Prot
Match: SGSM1_HUMAN (Small G protein signaling modulator 1 OS=Homo sapiens GN=SGSM1 PE=1 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.241e-13 Identity = 45/133 (33.83%), Postives = 77/133 (57.89%), Query Frame = 3 Query: 3 QIGLDVIRTDRTLVFYEKQENLSKLWDILAVYAWVDRDVGYCQGMSDLCSPMIILLENEADAFWCFERLMRRLRGNFRCTESSVGVETQLSNLASITQVIDPKL----HQHLGMI*NIRFCL*FWVIIYSKNV 389 +I DV R DR +Y NL KL +I+ Y W ++GY QGM DL +P++++L++EA AF CF LM+R+ NF ++T +N+ S+ Q++D +L HQ+ G + FC ++++ + + + Sbjct: 938 RIEKDVQRCDRNY-WYFTPANLEKLRNIMCSYIWQHIEIGYVQGMCDLLAPLLVILDDEALAFSCFTELMKRMNQNF---PHGGAMDTHFANMRSLIQILDSELFELMHQN-GDYTHFYFCYRWFLLDFKREL 1065
BLAST of CX289859 vs. ExPASy Swiss-Prot
Match: TBC25_MOUSE (TBC1 domain family member 25 OS=Mus musculus GN=Tbc1d25 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.047e-13 Identity = 41/107 (38.32%), Postives = 61/107 (57.01%), Query Frame = 3 Query: 15 DVIRTDRTLVFYEKQEN---LSKLWDILAVYAWVDRDVGYCQGMSDLCSPMIILLENEADAFWCFERLMRRLRGNFRCTESSVGVETQLSNLASITQVIDPKLHQHL 326 DV+RTDR +Y E+ L L D+L YA V YCQGMSDL SP++ ++++E AF CF +M+RL NF + T+ ++L + + DP +Q+L Sbjct: 345 DVLRTDRAHPYYAGPEDGPHLRALHDLLTTYAVTHPQVSYCQGMSDLASPILAVMDHEGHAFVCFCGIMKRLAANFH--PDGRAMATKFAHLKLLLRHADPDFYQYL 449
BLAST of CX289859 vs. ExPASy Swiss-Prot
Match: TBC25_HUMAN (TBC1 domain family member 25 OS=Homo sapiens GN=TBC1D25 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.047e-13 Identity = 41/107 (38.32%), Postives = 61/107 (57.01%), Query Frame = 3 Query: 15 DVIRTDRTLVFYEKQEN---LSKLWDILAVYAWVDRDVGYCQGMSDLCSPMIILLENEADAFWCFERLMRRLRGNFRCTESSVGVETQLSNLASITQVIDPKLHQHL 326 DV+RTDR +Y E+ L L D+L YA V YCQGMSDL SP++ ++++E AF CF +M+RL NF + T+ ++L + + DP +Q+L Sbjct: 291 DVLRTDRAHPYYAGPEDGPHLRALHDLLTTYAVTHPQVSYCQGMSDLASPILAVMDHEGHAFVCFCGIMKRLAANFH--PDGRAMATKFAHLKLLLRHADPDFYQYL 395 The following BLAST results are available for this feature:
BLAST of CX289859 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289859 ID=CX289859; Name=CX289859; organism=Citrus clementina; type=EST; length=662bpback to top |