CX289860
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289860 vs. ExPASy Swiss-Prot
Match: SCP51_ARATH (Serine carboxypeptidase-like 51 OS=Arabidopsis thaliana GN=SCPL51 PE=2 SV=2) HSP 1 Score: 251.136 bits (640), Expect = 3.624e-66 Identity = 129/220 (58.64%), Postives = 154/220 (70.00%), Query Frame = 2 Query: 2 AESYGGKFAATLGLAAVXXXXXXXXXXXXXXXXXXDSWISPEDFVFSWGPLLKDVSRLDTNGFAKSNQIAQKIKQQLEAGEFVGATDSWAQLESVISQNSNAVDFYNFLLDSGMDPVSLTAS-TLAVGASMRKYSRYLSAHK--SSTPDGDGDVGSLMNGVIKKKLKIIPENITWGGQSDSVFTELSGDFMRPRISEVDELLAKGVNVTVYNGQLDVICS 652 AESYGGK A LGL+ + DSWISPEDFVFSWGPLLK VSRLD NG SN +A+KIK Q++ GE+VGAT +W LE++IS SN VDFYNFLLD+GMDPVSLT S + ++KYSRYL+ + S D +GD+ LMNGVIKKKLKIIP ++ WG SD VFT + FM+P I +VDELLA GV+VT+YNGQLDVICS Sbjct: 164 AESYGGKIAVKLGLSVIDAVQSGKLKLHLGGVILGDSWISPEDFVFSWGPLLKHVSRLDDNGLDSSNSLAEKIKTQIKNGEYVGATQTWMDLENLISSKSNFVDFYNFLLDTGMDPVSLTTSLKIKKEEKIKKYSRYLNDMRSLSDVEDVEGDLDKLMNGVIKKKLKIIPNDLIWGNNSDDVFTAMEAAFMKPVIEDVDELLATGVDVTIYNGQLDVICS 383
BLAST of CX289860 vs. ExPASy Swiss-Prot
Match: RISC_HUMAN (Retinoid-inducible serine carboxypeptidase OS=Homo sapiens GN=SCPEP1 PE=1 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.435e-38 Identity = 92/220 (41.82%), Postives = 125/220 (56.82%), Query Frame = 2 Query: 2 AESYGGKFAATLGLAAVXXXXXXXXXXXXXXXXXXDSWISPEDFVFSWGPLLKDVSRLDTNGFAKSNQIAQKIKQQLEAGEFVGATDSWAQLESVISQNSNAVDFYNFLLDSGMDPVSLTASTLAVGAS-----MRKYSRYLSAHKSSTPDGDGDVGSLMNGVIKKKLKIIPENITWGGQSDSVFTELSGDFMRPRISEVDELLAKGVNVTVYNGQLDVI 646 +ESYGGK AA +GL DSWISP D V SWGP L +S L+ G A+ +++A+++ + G + AT+ W + E +I QN++ V+FYN L S P S S+L S +++ R+L S LMNG I+KKLKIIPE+ +WGGQ+ +VF + DFM+P IS VDELL G+NVTVYNGQLD+I Sbjct: 165 SESYGGKMAAGIGLELYKAIQRGTIKCNFAGVALGDSWISPVDSVLSWGPYLYSMSLLEDKGLAEVSKVAEQVLNAVNKGLYREATELWGKAEMIIEQNTDGVNFYNILTKS--TPTSTMESSLEFTQSHLVCLCQRHVRHLQRDALS---------QLMNGPIRKKLKIIPEDQSWGGQATNVFVNMEEDFMKPVISIVDELLEAGINVTVYNGQLDLI 373
BLAST of CX289860 vs. ExPASy Swiss-Prot
Match: RISC_MOUSE (Retinoid-inducible serine carboxypeptidase OS=Mus musculus GN=Scpep1 PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.448e-38 Identity = 89/215 (41.40%), Postives = 120/215 (55.81%), Query Frame = 2 Query: 2 AESYGGKFAATLGLAAVXXXXXXXXXXXXXXXXXXDSWISPEDFVFSWGPLLKDVSRLDTNGFAKSNQIAQKIKQQLEAGEFVGATDSWAQLESVISQNSNAVDFYNFLLDSGMDPVSLTASTLAVGASMRKYSRYLSAHKSSTPDGDGDVGSLMNGVIKKKLKIIPENITWGGQSDSVFTELSGDFMRPRISEVDELLAKGVNVTVYNGQLDVI 646 +ESYGGK AA + + DSWISP D V SWGP L +S LD G A + IA+++ + G + AT W + E +I +N++ V+FYN L S + ++ +R R++ + GD + LMNG IKKKLKIIPE+I+WG Q+ VF + GDFM+P I VD+LLA GVNVTVYNGQLD+I Sbjct: 165 SESYGGKMAAGISVELYKAVQQGTIKCNFSGVALGDSWISPVDSVLSWGPYLYSMSLLDNQGLAMVSDIAEQVLDAVNKGFYKEATQLWGKAEMIIEKNTDGVNFYNILTKSSPEKAMESSLEFLRSPLVRLCQRHVRHLQ-----GDA-LSQLMNGPIKKKLKIIPEDISWGAQASYVFLSMEGDFMKPAIDVVDKLLAAGVNVTVYNGQLDLI 373
BLAST of CX289860 vs. ExPASy Swiss-Prot
Match: RISC_RAT (Retinoid-inducible serine carboxypeptidase OS=Rattus norvegicus GN=Scpep1 PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.706e-37 Identity = 90/215 (41.86%), Postives = 119/215 (55.35%), Query Frame = 2 Query: 2 AESYGGKFAATLGLAAVXXXXXXXXXXXXXXXXXXDSWISPEDFVFSWGPLLKDVSRLDTNGFAKSNQIAQKIKQQLEAGEFVGATDSWAQLESVISQNSNAVDFYNFLLDSGMDPVSLTASTLAVGASMRKYSRYLSAHKSSTPDGDGDVGSLMNGVIKKKLKIIPENITWGGQSDSVFTELSGDFMRPRISEVDELLAKGVNVTVYNGQLDVI 646 +ESYGGK AA + L DSWISP D V SWGP L VS LD G A+ + IA+++ + G + AT W + E +I +N++ V+FYN L S D ++ +R R++ + GD + LMNG IKKKLKIIP++++WG QS SVF + DFM+P I VD LL GVNVTVYNGQLD+I Sbjct: 165 SESYGGKMAAGISLELHKAIQQGTIKCNFSGVALGDSWISPVDSVLSWGPYLYSVSLLDNKGLAEVSDIAEQVLNAVNKGFYKEATQLWGKAEMIIEKNTDGVNFYNILTKSTPDTSMESSLEFFRSPLVRLCQRHVRHLQ-----GDA-LSQLMNGPIKKKLKIIPDDVSWGAQSSSVFISMEEDFMKPVIDIVDTLLELGVNVTVYNGQLDLI 373 The following BLAST results are available for this feature:
BLAST of CX289860 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX289860 ID=CX289860; Name=CX289860; organism=Citrus clementina; type=EST; length=652bpback to top |